| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 298,960 | 0 | A | C | 50.7% | 76.2 / 113.7 | 70 | Y659D (TAT→GAT) | paoC | PaoABC aldehyde oxidoreductase, Moco‑containing subunit |
| Reads supporting (aligned to +/- strand): ref base A (28/6); new base C (0/35); total (29/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.02e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.00e-11 | |||||||||||
ATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCAC > NC_000913/298814‑299103 | ataCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATAcccc < 2:644099/151‑1 (MQ=255) acacCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCg < 1:1345842/150‑1 (MQ=255) acacCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGc < 1:377873/151‑1 (MQ=255) acCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGcc > 1:1294220/1‑150 (MQ=255) cgTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATc > 1:43259/1‑151 (MQ=255) gTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCg > 1:402257/1‑151 (MQ=255) ttGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCa > 2:1223203/1‑145 (MQ=255) ttGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTCTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCa < 1:1222361/145‑1 (MQ=255) atggCCGCGCTCACGCCGCACAGGCCCAGCCCACCGACCCCTTTGG‑CCTTCATCGGGGAGGATAGGGGTTGGGTATCACCCAGGAAAATCCCCTCCTGTTT‑GGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATCCCCCGCCATATCGTGAtt < 2:79895/146‑1 (MQ=255) gCCGCGCTCCCGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCCCCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATTAAc < 2:988219/149‑1 (MQ=255) gCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGCGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACg > 1:1069645/1‑150 (MQ=255) ccGCCCTCCCGCCGCACAGCCCCAGCTCCCCGCCCCCTTGGG‑CCTTCATCGGGGAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTTTTT‑TGGA‑ATATCCGC‑AGGAACCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACg < 1:882702/149‑1 (MQ=255) cccgcaggcccgccacgGGCCCACCTGCCCGACACCTTTGC‑CCTTCATCGGGAAGGTAAGGGGTTCGGTACAAACCGGAAAACTCCCCTCCTTTGG‑GGGG‑TTGCCCGT‑ATGCCCCGC‑CACCTAATACCCCGCCATATCGTGATTAACGAAg < 1:1016620/138‑1 (MQ=255) cTCCCGCCGCACGGGCCCACCTCCCGGACCCTTTTGG‑CCTTCACCGGGGAGGATAGGGGGTCGGTTTCATCCAGAAAAATCCCCTCCTGTTT‑TGGG‑ATATCCGA‑AAGAACCGG‑CCCCTAATCCCCCGCCATATCGTGATTAACGAAGTAg < 2:585918/150‑1 (MQ=255) cACGCCGCACAGGCCCAGCTCACCGACCCCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCACCCAGAAAAACCCCCCCCTGTTT‑TGGG‑ATATCCGC‑AGGAACCGG‑CACCTCATCCCCCGCCATATCGTGATTAACGAAGTAGccc < 2:984854/151‑1 (MQ=255) cACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGccc > 1:636096/1‑151 (MQ=255) cccgcATAAGCCCCGGCCACCGACACTTTCGG‑CCTTCGTGGGGGAGGCTGAGGTTGTGGAAACCCCCAGGAAAATCCCCTCCTTTTG‑TGAG‑AT‑TCCGCTAGGTACGGC‑CACAGAATCCCCCGCCATATCGTGATTAACGAAGTAGCCCa < 1:19106/148‑1 (MQ=255) cgcACAGGCCCAGCCCCCCGACCCTTTGGG‑CCTTCATCGGGGAGGATAGGGGGTGGTTATCATCCAGAAAAATCCCCTCCTTTTT‑TGGG‑ATATCCGC‑ATGACCCGC‑CCCCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAAc < 1:1306045/150‑1 (MQ=255) acaGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTc > 1:928543/1‑151 (MQ=255) ggCCCAGCTCCCCGACCCCTTTGG‑CCTTCATCGGGGAGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTT‑TGGG‑ATACCCGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACgg < 2:1086778/146‑1 (MQ=255) ggCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATAGGGGGTCGGTATCATCCAGAAAAATCCCCTCCTTTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTc < 2:420866/148‑1 (MQ=255) cccAGCCCCCCGCCCCCTTTGG‑CCTTCATCGGGGAGGATAGGGGGTCGGTATCATCCAGGAAAATCCCCTCCTTTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATcc < 2:916002/150‑1 (MQ=255) cccAGCCCCCCGCCACCTTTGG‑CCTTAAGGGGGGGGGATAGGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTT‑TGGA‑AAACCCGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCa < 1:27753/151‑1 (MQ=255) gCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGc > 1:751242/1‑151 (MQ=255) cACCGCCCCTTTTGC‑CCTTCATGGGGGAGGATAGGGGGTCGTTACCACCAAGAAAACTCCCCTCTTTTTT‑GGGT‑ATATCCGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCa < 2:265051/150‑1 (MQ=255) ccgcccccTTTGC‑CCTCCATGGGGGAGGATAGGGGGCATGTACCACCCAGGAAAATCCCCTCTTGTTT‑TGGG‑TTATCCGC‑ATGACCGGC‑CCCCCCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGct < 1:651930/145‑1 (MQ=255) cGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGctc > 1:121353/1‑151 (MQ=255) cccTTTGGCCCTTCAGGGGGGGGGATGGGGGGGCGTTATCACCCA‑GAAAAACCCCCCCTTTTT‑TGGGTATACCCGA‑AGGACCGGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGctcc < 1:73765/148‑1 (MQ=255) gg‑CCTTCATGGGGGAGGAATGGGGGTAGATAGCACCCAGAAAAACCCCCTCCTGTTT‑GGGG‑ATACCCGA‑ATGACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAg < 1:1269810/150‑1 (MQ=255) gcccTTCATGGGGGAGGATAGGGGGTCGTTATCACCCAGAAAAATCCCCCCCTGTTT‑GGGG‑ATACCCGC‑ATGACCCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGt < 2:838740/149‑1 (MQ=255) gcccTTCAGCGGGGAGGATAGGGGTTCGTTATCCCCCAGAAAAATCCCCTCCTTTTT‑TGGG‑ATATCCGC‑ATGACCCCC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCa < 2:477981/147‑1 (MQ=255) ttCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcg > 1:1273360/1‑151 (MQ=255) ggggAGGATAGGGGGTGGTTATCACCAAGGAAAATCCCCTCCTGTTT‑TGGG‑ATACCCGC‑ATAACCCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcgc < 2:409509/146‑1 (MQ=255) ggggAGAATTGGGGGTGGGTACCA‑CCAAGAAAACCCCCCCCTTTTTGTGGT‑ATATCCGG‑TTAACCCGG‑CCCCTAACCCCCCGCCATATCGTGATTAGCGAAGTAGCCCAAGCGGTCATCCTCCGCCAGCTCCTCCATCAGTGc < 1:213657/143‑1 (MQ=255) ggggAGAATTGGGGGCCGGTTTCACCCGGAAAAACCCCCCCCTTTTG‑AGGG‑ATA‑CCGC‑AAGAACCGGCCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCcgc < 2:121372/146‑1 (MQ=255) gggAGGATAGGGGGTGGGTATCACCCAGAAAAATCCCCTCTTGTTT‑TGGG‑ATACCCGC‑ATGACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 2:468769/151‑1 (MQ=255) gggAGGATAGGGGGTCGGTATCACCCAGAAAAATCCCCCCCTGTTT‑TGGG‑ATATCCGC‑ATGACCCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat < 2:1233507/151‑1 (MQ=255) ggggTGGGTATCACCCAGAAAAATCCCCTCCTTTTT‑TGGG‑ATACCCGC‑ATAACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGt < 2:1320131/150‑1 (MQ=255) ggggTCGTTATCACCGAGGAAAACCCCCCCTTTTTT‑TGGG‑ATATCCAC‑AGGACCGGC‑CCCCTCAACCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgcccat < 2:94029/147‑1 (MQ=255) ggggTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc > 1:1368278/1‑151 (MQ=255) gTACCACCCAGGAAACTCCCCTCCTGTTT‑GGGT‑ATACCCGC‑ATGACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgcgc < 1:696477/151‑1 (MQ=255) tATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGcc > 2:1229410/1‑151 (MQ=255) ccAGAAAAATCCCCTCTTTTTT‑TGGG‑ATACCCGC‑ATGACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgcgc < 2:1065382/144‑1 (MQ=255) ccAGAAAAATCCCCTCCTTTTT‑GGGG‑ATCTCCGC‑ATGACCCGC‑CACCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGAc < 2:87355/151‑1 (MQ=255) aGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCt > 1:1178795/1‑151 (MQ=255) aaaaTCCCCTCCTGTTT‑GGGG‑ATCCCCCC‑ATGACCCGC‑CCCCTCACCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATg < 1:102854/144‑1 (MQ=255) aaccccctcctGTTT‑TGGG‑ATATCCGA‑ATGACCCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTg < 2:528718/146‑1 (MQ=255) accccctcttGTTT‑TGGG‑ATACCCGC‑AGAACCCGG‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTg < 2:585478/146‑1 (MQ=255) tCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcg > 1:1065351/1‑151 (MQ=255) tCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcg > 2:658472/1‑151 (MQ=255) cACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcg > 1:581665/1‑150 (MQ=255) aCCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgcg > 1:395882/1‑151 (MQ=255) ctcctGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgcgc > 2:726682/1‑150 (MQ=255) ctcctGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgcgc > 1:1240883/1‑150 (MQ=255) ctcctGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAATCATTGCGCCAATGACCTGGCTgcgcgc > 2:690327/1‑150 (MQ=255) tGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGttt > 1:1381215/1‑151 (MQ=255) ttt‑tGTT‑ATCTCCGC‑TTGTACCGG‑CACCTTTCTCCCCGCCATATCGTGCGTGACGAGGTAACCCAGCCGGTCATCTACCGGCAGCTCCTGCAGCAGGGCGGCGGCCTTGCCCATAGTCATTGCGCCAAGGTCCTGGCGGCGCGCGGttt > 1:56818/1‑149 (MQ=255) tt‑tGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCg > 1:159232/1‑151 (MQ=255) tGGG‑ATATCCGC‑ATAAACCGG‑CACCTCATACCCCGCCATATCGTGCTTAACGAAGTAGACCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCAGGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGGTTTCgg > 1:492882/1‑150 (MQ=255) tatCCGC‑ATGAACCGG‑CAACTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCACTGACCTGGCCGCGCGCAGTTTTCGGATTc > 1:376573/1‑149 (MQ=255) ccGC‑ATGAACCGG‑CCCCTCATCCCCCGCCATATCGTGATCAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCa < 2:392565/147‑1 (MQ=255) ccGC‑ATGAACCGC‑CCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg < 2:395803/149‑1 (MQ=255) gC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc > 2:1044251/1‑151 (MQ=255) catcaaccccccccTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATg < 1:351050/137‑1 (MQ=255) aCCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTg > 1:450130/1‑151 (MQ=255) ccGG‑CCCGTCAACCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCt < 1:1132032/149‑1 (MQ=255) cgcccccTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTcc < 1:397130/142‑1 (MQ=255) cgcccccTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCt < 1:719108/143‑1 (MQ=255) aCCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac > 2:757136/1‑151 (MQ=255) ccTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac > 1:871811/1‑150 (MQ=255) tcccaCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGcac < 1:914293/144‑1 (MQ=255) | ATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTT‑TGGG‑ATATCCGC‑ATGAACCGG‑CACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCAGCAC > NC_000913/298814‑299103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |