| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 436,516 | 0 | C | A | 42.0% | 109.8 / 37.6 | 81 | Q295K (CAA→AAA) | thiL | thiamine monophosphate kinase |
| Reads supporting (aligned to +/- strand): ref base C (38/9); new base A (0/34); total (38/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.71e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTC > NC_000913/436367‑436666 | tttCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGc > 2:194122/1‑150 (MQ=255) ttCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGc < 2:757273/149‑1 (MQ=255) ttCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGc < 1:259935/149‑1 (MQ=255) tcGCCATGTTGAACCGGAACCGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGCGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATg > 1:571802/1‑151 (MQ=255) cGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATg > 1:1194734/1‑150 (MQ=255) cGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATg < 1:33177/150‑1 (MQ=255) gCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAc > 2:153585/1‑151 (MQ=255) ccATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAcc < 1:29975/151‑1 (MQ=255) aTGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgc > 2:74954/1‑151 (MQ=255) aTGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAAATGCACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgc > 1:1143660/1‑151 (MQ=255) gTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGAccgccg < 1:1142017/151‑1 (MQ=255) tGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGTCGCGCTGGATTTTGCTCTCTTCCCCCTTGTCT‑TACCGTTTACC‑TGTATCGGGCAAATGAccgccgct > 2:511343/1‑149 (MQ=255) gAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGat > 2:395402/1‑150 (MQ=255) aCCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATc > 2:1332465/1‑151 (MQ=255) ggATCAGGCGCTGGCCGGGCCTCTCTCGGGCGGTGAAGATAAGGAGTTGTTTTCCACGGTGCTGGAACTGAACCGGGGCGCTCTGGTTGTGGCTCTCGGACACTGGGACG‑TACGGTTTCCC‑GTTACGGGGCAAATGACCGCCGATATCGaa < 1:865177/151‑1 (MQ=255) aaCAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAgg > 2:86601/1‑151 (MQ=255) cAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGAACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGata > 1:351888/1‑142 (MQ=255) cAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACGGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑CACCGTTTACC‑TGTATCGGGCAAATGGCCGCCGATATCGAAGGGc > 1:234467/1‑151 (MQ=255) ggcgcggcgcGGGCCTCTCTCGGGGGTTGAAGATTAGGATTTTTTTTTCACTGTGCCGAAACTGACCCGTGGCGCGCGGGATGTGCCTCGCGGACCCCGGGGGG‑TCCTTTTTCCC‑TTTATCGGGAAAATGACCGCCGATATCGAAGGGCtt < 1:959486/151‑1 (MQ=255) gctgcgctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGt > 1:1116263/1‑151 (MQ=255) gctgcgctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGt > 1:851436/1‑151 (MQ=255) gctgcgctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGt > 2:1102771/1‑151 (MQ=255) ctgcgctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGtt > 1:1138776/1‑151 (MQ=255) gggctgGGCGCGCGCGGGCGGGGAAGTTTACGGGTTGTTTTCCCCTGTGCCGGACCTGACCCGGGGCGCTGTGGATGTGGCTCGCGGCCACGGGGGGG‑TCCCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGttt < 1:730932/148‑1 (MQ=255) gcggggggCGCTTTCGGGGGGTGAATATTACGAGTTTTTTTTCCCTGTGCCGAAACTGACCCGGGGCGCGGTGGATGTGGCTCTCGCCCACGGGGGCG‑TACTTTTTCCT‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTg < 1:877624/142‑1 (MQ=255) gctgGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTAt > 1:766931/1‑151 (MQ=255) ggggCGCTCTCGGGCGGTGAAGTTTACGGTTTTTTTTTCCCTGGGCGGGAACTGACCCGTGGCGCGGGGGGTGTGGCCCCCGCCCCCGTGGGCG‑TACTTTTTCCC‑TGTATCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTc < 1:793341/150‑1 (MQ=255) gggCGCTCTCGGGGGGTGAAGATTACGTGTTGTGTTTCACGTTGCCGGAACTGAACCGTGGCGCGTTGGATGTGGCTCTGGGCCACTGGGGCG‑TCCTTTTTACT‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTAt < 1:655518/148‑1 (MQ=255) gggCGCTCTCGGGCGGTGAAGATTACGGGTTTTGTTCCCCTGTGCCGGAACTGACCGGTGGCGCGTTGGATGTGCCTCTCGGACCCTTGGGCG‑TCCCTTTTCCC‑TGTATCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTAt < 2:78459/148‑1 (MQ=255) gtcgcCCTCTGGCGGGGAAAATTACGTGTTGTTTTTCTCTGAGCCGGAACGGACCCGTGGCGCTTTGGTTGTGGCTCGCGGACACGTGGGCG‑TACCTTTTCCC‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTc < 2:762972/147‑1 (MQ=255) gtccctttctGGGGATAAAGATTAGGGGTTGTGTTTCAGTTTGCCGAAACGGAGCTGGGCGGCCCTGGTTTGGGTTCAGGCAC‑CCTGGGTGCTACATTTTACT‑TTAATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCg < 2:960873/143‑1 (MQ=255) cgcTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTg > 2:1315640/1‑150 (MQ=255) tctctGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACgg > 1:612835/1‑151 (MQ=255) gggggTGAATATTACGAGTGGTGTTTCCCTGGGCGGGAACTGACCCGTGGCGCGTTGGATGTGGCTCCCGGACACGGGGGCG‑TCCGTTTTACT‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACgg < 1:252524/143‑1 (MQ=255) ggTGAAGATTACGTGTTGTTTTTCACTGTGCCGGAACTGACCCGGGGCGCGCTGGTTGTGGCTCGCGGACACCGGGGCG‑TCCCGTTTCCC‑TGTATCGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTg < 2:13208/151‑1 (MQ=255) aaGTTTACGAGTTGTGTTTCCTTGTGCCGGAACTGACCGGTGGCGCGGTGGATGGGGCTCGGGAACCCTGGGGCG‑TCCCTTTTTCC‑TGTTGCGGGAAAATGGCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTAc < 2:463662/151‑1 (MQ=255) aaGATTACGTGTTGTTTTTCCCTGTGCGGGAACGGACCGGTGGCGGGTTGGATGGGCCTCTCGACCCCCGGGGCG‑TCCCTTTTCCT‑TGTATCGGCAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTAc < 1:967777/151‑1 (MQ=255) aaGATTACGAGTTGTGTTTCCCTGTGCGGGAACTGACCCGTGGCGCGTTGGATGGGGCTCTCGGACCCCGGGGCG‑TCCCGTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGtt < 2:1320135/149‑1 (MQ=255) ttACGAGTTGTGTTTCACTGTGCGGAAACTGACCGGGGGCGCGCTGGATGTGGCTCTCGGACCCCTGGGCG‑TCCCTTTTCCC‑TGTTTGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAtt < 2:1349301/150‑1 (MQ=255) ttACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACAtt > 2:630824/1‑150 (MQ=255) aGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTg > 1:1153407/1‑151 (MQ=255) tttttCACTGTGCCGAAACGGACCCGGGGCGCGCTGGATGTGGCTCTCGGACCCCGGGGCT‑TACCTTTTACC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGaaa < 2:850971/148‑1 (MQ=255) tttCCCTGTGCCGAAATTAACCCGTGGCGCGCTGGATGTGTCTCTCGGACCCGTGGGCG‑TCCCTTTTCCC‑TGTATCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAgg < 2:454804/150‑1 (MQ=255) tttCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAgg > 1:951/1‑150 (MQ=255) cccTGTGCGGGAACGAACCCGTGGCGCGCTGGTTGTGGCTCCGGGACCCCGGGGCG‑TACTTTTTCCC‑TGTATCGGACAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGatat < 2:218387/149‑1 (MQ=255) tgtgCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGAc > 1:1059514/1‑151 (MQ=255) tgtgCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGAc > 1:635409/1‑151 (MQ=255) gCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAt > 1:1296826/1‑151 (MQ=255) cGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAttt > 2:111230/1‑151 (MQ=255) ggAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAtttt > 2:273531/1‑151 (MQ=255) aaCTGAACCGTGGCGCGTTGGATGTGGCTCTCGGACCCCGGGGCG‑TCCCGTTTCCC‑TTTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAtttt < 2:1060557/149‑1 (MQ=255) aaCTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGc > 1:551331/1‑151 (MQ=255) atagaaggggggggcgcTGGGTGTGGCTCTCGGCCCCCGGGGGG‑TCCTTTTTCCC‑TGTCTGGGGCAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGAc < 2:1291800/129‑1 (MQ=255) gacccGGGGGGCGCGGGTTGTGGCTCTCGGACCCCGGGGTG‑TCCCGTTTCCC‑TGTAGGGGGCAAATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCa < 1:91639/146‑1 (MQ=255) aCCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGcc > 2:11123/1‑151 (MQ=255) cgggggCGCGCTGGATGGGGCTCTCGGCCCCCGGGGCG‑TACCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACg < 2:640173/144‑1 (MQ=255) cggTGGCGCGTTGGATGTGGCTCTCGGACCCCTGGGGG‑TCCCTTTTCCC‑TGTATGGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCa < 2:805603/149‑1 (MQ=255) ggggCGCGGTGGTTGGGCCTCCCGCACCCGGGGGGC‑TACCTTTTTCC‑TGTAGGGGCCAAATGGCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCAt < 2:743566/148‑1 (MQ=255) cgcTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATg > 2:1187524/1‑151 (MQ=255) gggATGGGCCCCTCGGACACCTGGGCT‑TCCGTTTTCCC‑TGATCCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTcg < 1:38598/150‑1 (MQ=255) ggCTCTCGGACCCCGGGGCG‑TCCCTTTTCCT‑TGTATGGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAg < 2:1306689/151‑1 (MQ=255) ctatcggccccTGGGGG‑TTTCGTTTTCCTTTTATGGGGAAAATAACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGGTGTcg < 2:357133/133‑1 (MQ=255) ctcGGATCCCGGGGCG‑TCCCTTTTCCC‑TGATTCGGGAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCg < 1:1331595/150‑1 (MQ=255) cggggcccccggggCG‑TCCCTTTTCCC‑TGTAGCGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGt < 1:728238/137‑1 (MQ=255) cccatcccctggggCG‑TACCTTTTTCC‑TTGATGGACCACATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCAGTTTGCCACGCCATAAAGATGTCGCGAAAAGTc < 1:62581/138‑1 (MQ=255) ggccacTTGGGGG‑TCCTGTTTCCC‑TATATGGGGAAAATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCg < 2:988559/144‑1 (MQ=255) ggACCCCGGGGCG‑TCCCTTTTCCT‑TTTAGCGGAAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGcc < 2:859413/149‑1 (MQ=255) acacCTGGGCG‑TACCTTTTCCC‑TGTATCGGGAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGc < 2:340184/146‑1 (MQ=255) cacCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGa > 1:915753/1‑149 (MQ=255) cctggggCG‑TCCTTTTTCCC‑GGTATGGGGAAAGGGGCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGa < 1:1272323/144‑1 (MQ=255) g‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAAt > 1:42811/1‑151 (MQ=255) g‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGACTGAAGATGAGTAAt > 1:584343/1‑151 (MQ=255) tACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCCTGACGGCGAACCTGTTACATTAGACTGGAAAGGCTATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATc > 1:233973/1‑151 (MQ=255) aCCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATcc > 2:1371528/1‑151 (MQ=255) aCCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATAACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATcc > 1:327913/1‑151 (MQ=255) aCCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAAACTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATcc > 1:1019481/1‑151 (MQ=255) tttCCC‑TTTGTCGGGAAAATGCCCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATc < 2:933955/146‑1 (MQ=255) tttccttGTATGGGAAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTg < 2:1323599/144‑1 (MQ=255) ttccc‑TGTATCGGAAAAAGGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTgg < 2:1302633/147‑1 (MQ=255) cc‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATc > 1:910634/1‑151 (MQ=255) gggCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCt > 2:1262614/1‑151 (MQ=255) gggAAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTAc < 2:1046917/146‑1 (MQ=255) gggAAAATGACCGCCGATATCGAAGGGCTTTGGTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACtt < 2:118724/148‑1 (MQ=255) gggAAAATAACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACt < 2:59770/147‑1 (MQ=255) cAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATCAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTc > 1:306538/1‑151 (MQ=255) | TTTCTCGCCATGTTGAACCGGAACAGGCGCTGCGCTGGGCGCTCTCTGGCGGTGAAGATTACGAGTTGTGTTTCACTGTGCCGGAACTGAACCGTGGCGCGCTGGATGTGGCTCTCGGACACCTGGGCG‑TACCGTTTACC‑TGTATCGGGCAAATGACCGCCGATATCGAAGGGCTTTGTTTTATTCGTGACGGCGAACCTGTTACATTAGACTGGAAAGGATATGACCATTTTGCCACGCCATAAAGATGTCGCGAAAAGTCGCCTGAAGATGAGTAATCCGTGGCATCTACTTGCTGTC > NC_000913/436367‑436666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |