| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 925901 = | 69 (1.040) | 9 (0.140) +C |
8/296 | 9.3 | 14.8% | noncoding (71/88 nt) | serW | tRNA‑Ser |
| ? | NC_000913 | = 1097399 | 35 (0.530) | intergenic (+570/+166) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTC > NC_000913/1097255‑1097488 | cACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa < 1:901200/150‑1 (MQ=31) aCTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGa < 2:903652/149‑1 (MQ=31) cGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAAtcgc > 2:234084/1‑150 (MQ=17) gTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGAGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGGGTTGa > 2:909289/1‑144 (MQ=9) ttCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggggggttggaaccccc > 1:916667/1‑138 (MQ=2) cGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctc < 2:128603/151‑1 (MQ=33) cTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGggggggggggtcggaacccc > 1:733544/1‑130 (MQ=0) tGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGAATCGCTTTCCCCGccc > 2:317343/1‑150 (MQ=11) tCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTg < 2:444603/150‑1 (MQ=33) ccAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTGATCCCCCCGGTGTGTGCAATATCCGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg < 1:1030723/151‑1 (MQ=18) ccAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCg < 2:709332/151‑1 (MQ=33) ggCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg < 2:90611/150‑1 (MQ=33) ggCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg < 2:558755/150‑1 (MQ=33) gCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg < 1:351805/149‑1 (MQ=33) gCCAGTTGTCTAACCAAGGTCGGGGCTTCTCCCGCCCCCTGTGCGTTTAATATACGAAAAGAAAAGCCCGTCCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGccc < 1:681728/147‑1 (MQ=11) gTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCCCTTCGCTCCCCCCGCGGGGAGccccccccc > 2:886097/1‑142 (MQ=11) ttGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTGTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTg < 1:998205/149‑1 (MQ=18) gAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGACTCGCTTCGCTCGCCCCGCGGGCAGCCCGCCCCCTGCGTTccc > 2:298350/1‑149 (MQ=11) cccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTc < 1:287697/151‑1 (MQ=31) ccGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGGATCCCCTCGCCCCCCCCCCGGGGAGCCCCCTcccgggggttcc > 1:654535/1‑135 (MQ=11) gTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTTACTCGCCTCGCTCGCCCTGCGGGGAGccccccccccgcggttc > 2:696506/1‑128 (MQ=11) gTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCa < 1:696203/142‑1 (MQ=31) gTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGAATCGCTTCGCTCCCCCTGCGGGGAGCCCCCCCACTGCGTTCCCgg > 2:13552/1‑145 (MQ=11) cGGGGCTTCTCATCCCCCCGGTGTGTGCAGTATACGAAAA‑AAAAGCCCGTTCTTTCCTACCCGCTCTTCTCTAAATACGGCGCTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCa < 1:75173/151‑1 (MQ=11) cGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAACCCCCCCGCCCGCCCTCCGGGTCACCCGCTCCCCGCGGGCGCGgtccgtcc > 1:339927/1‑150 (MQ=11) ggCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTTACTCCCTTCGCCCGCCCTCCGGGGGGCCCCCTCACTCCGTTCACCGTCTGTccca > 2:755863/1‑147 (MQ=11) gCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTg < 2:161295/151‑1 (MQ=31) ttCTCATCCCCCCGGTTTGTGCAATATACGACAA‑AAAAGGCTGTACTCTCGTCCGAGCTCGTCCTCAAACATTGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACt < 1:917598/148‑1 (MQ=11) ttCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGGTGAATCGCTTCGCTCCCCCTGCGGGGAGCCCGCCCCCTGCGTTCACCGTCTGttccac > 2:580389/1‑142 (MQ=11) tctcATCCCCCCGGTGTGTGCAAAATTCGAAAA‑AAAAGCCCGTCCTTTCGTACGACCGCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGc < 1:575941/150‑1 (MQ=255) tcATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGATGACACGCTTCGCCCCCCCTGCGGGCAACCCCCCCACCGCGTTCACTCTCTTTcccaatcggtgt > 2:79495/1‑141 (MQ=11) cATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTg < 2:307056/149‑1 (MQ=31) cATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTc < 1:908934/151‑1 (MQ=31) tCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACTCGCTTCGCTCGCCCCGCGGGGAGCCCCCTCACTGCGTTTACCGTCTTTCCAACTGGGCGTCGc > 2:609311/1‑151 (MQ=11) ccccccGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGcc < 1:580132/151‑1 (MQ=31) gCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAccc < 2:278458/151‑1 (MQ=31) atcataCGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAAcccc < 1:176117/147‑1 (MQ=14) atatCCGCAAA‑ATACGGCTGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCg < 1:78263/150‑1 (MQ=11) taCGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCCCCCACTGCGTTTACGGGCTGTCCAACTGGGTGTCGCCAGTTGTCGAAcccccggc > 2:176222/1‑146 (MQ=11) | CACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATATACGAAAA‑AAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAGCCCGCTCACTGCGTTCACGGTCTGTCCAACTGGCTGTCGCCAGTTGTCGAACCCCGGTC > NC_000913/1097255‑1097488 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |