Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	298,960	0	A	C	43.5%	102.4 / 14.4	62	Y659D (TAT→GAT)	paoC	PaoABC aldehyde oxidoreductase, Moco‑containing subunit
Reads supporting (aligned to +/- strand):  ref base A (28/7);  new base C (0/27);  total (28/34)
Fisher's exact test for biased strand distribution p-value = 2.59e-11
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCA  >  NC_000913/298810‑299099                                                                                                                                                         |                                                                                                                                            cGTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATa                                                                                                                                             <  1:439627/151‑1 (MQ=255)  gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATAc                                                                                                                                            <  2:8187/151‑1 (MQ=255)  gTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATAc                                                                                                                                            >  1:343606/1‑151 (MQ=255)     ataCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATAcccc                                                                                                                                         <  1:809296/151‑1 (MQ=255)      taCACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCg                                                                                                                                        >  2:761475/1‑151 (MQ=255)         acCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGcc                                                                                                                                      >  2:776586/1‑150 (MQ=255)          ccGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCat                                                                                                                                    >  2:335435/1‑151 (MQ=255)              gTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCg                                                                                                                                >  1:109018/1‑151 (MQ=255)              gTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCg                                                                                                                                >  2:944328/1‑151 (MQ=255)                     aTAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTa                                                                                                                          >  2:177962/1‑150 (MQ=255)                        gCCGGGGTCACGCCGCAGGGGCCCACCCCCCCGCCCCCTTGGG‑CCTGCATCGGGGGGGATATGGGGTCGGTATCACCCAGAAAAACCCCCTCCTGTTTGGGGATACCCGCATGAACCG‑GCCCCGCTTACCCCGCCATATCGTGATTAAc                                                                                                                        <  1:351954/149‑1 (MQ=255)                         ccGCGCCCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCACCGGGGAGGATATGGGGTCGTTATCACCCAGAAAAATCCCCCCCTGTTTGGGGATACCCACAGGACCGG‑CCACCTCATCCCCCGCCATATCGTGATTAACGaa                                                                                                                     <  1:367414/151‑1 (MQ=255)                          cgcccccccgccgcACAGCCCCCCCCCCCCG‑CCCCTTTGGCCCTTCATCGGGGAGAATTGGGGGACGGTACCATCCAGAAAAACCCCCTCCTTTTTGGGGTTCCCCGAATGAACCG‑GCGCCTCATACCCCGCCATATCGTGATTAACGa                                                                                                                      <  1:960781/141‑1 (MQ=255)                                    ccgcACAGGCCCAGCTCGCCGACGCGTTTGG‑CCTTCATCGGGGAGGATAGGGGGTCGGAACCGCCCAGGAAAACCCCCTCCTTTTTGGGAATACCGGCATAACCCG‑CCCCCACATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAAc                                                                                                          <  1:358208/151‑1 (MQ=255)                                    ccgcACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAAc                                                                                                          >  2:565244/1‑151 (MQ=255)                                      gcACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACgg                                                                                                        >  1:58957/1‑151 (MQ=255)                                       cacaGGCCCAGCTCACCGACGCTTTTGG‑CTTTCAGGGGGTAGGTTATGGGGCCGTTACCTTCAGGGAAATTCTCCCCTTGTTTAGGAATAGCCGTTTCAACGG‑CCCCTTAATCCCCCGCCATATCGTGATTAACGAAGTAGCCCa                                                                                                             <  2:949100/145‑1 (MQ=255)                                         caGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTc                                                                                                      >  1:316226/1‑150 (MQ=255)                                          aGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCAt                                                                                                    >  1:967579/1‑151 (MQ=255)                                           ggCCCACCGCACCGACCCCTTGGG‑CTTTCTGCGGGGAGGATAGGGGGTCGGTATCATCCAGGAAAATCCCCCCCTTTTTTGGGATTCCCGAATGACCCG‑CCCCCCCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCa                                                                                                     <  1:903358/149‑1 (MQ=255)                                           gccccAGCTCCCCGACACCTTTGG‑CCTTCAGCGGGGAGGATTGGGGGTCGGTATCACCCAGGAAAATCCCCTCCTTTTTTGGAATACCCGCATAACCCG‑CCCCCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGt                                                                                                       <  1:948773/145‑1 (MQ=255)                                              ccggCTCCCCGACCTCTTGGG‑CCTTCAGGGGGGAGGATATGGGGTCGTTATCACCCAGAAAAACCCCCCCCTTTTTGGGGTTACCCGAATGACCCG‑GCACCTAACCCCCCGCCATATCGTGATTAACGAAGTAGccc                                                                                                              <  1:92191/134‑1 (MQ=255)                                                 gCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGc                                                                                             >  2:456403/1‑151 (MQ=255)                                                  cTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGcc                                                                                            >  2:996436/1‑151 (MQ=255)                                                          cacCTTGGG‑CCTTCATGGGGGAGGATATGGGTTGGTTATCACCCAGAAAACCCCCCCCCTTTTTTGGGATTTCCGCATGACCCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGctcct                                                                                     <  2:74370/150‑1 (MQ=255)                                                                tttgctttcgtgggggAGGATATGGGGCCGGTATCATCCAGAAAAACCCCCTCCTTTTTTGGTATCACCGTATAACCCG‑CCCCCTCTCCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGcc                                                                                            <  1:887286/126‑1 (MQ=255)                                                                tGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATc                                                                                >  2:969844/1‑149 (MQ=255)                                                                 gg‑CCTTCAGGGGGGGGGATTTGGGGCGTGTATCCCCCAGAAAAAGCCCCTCCTTTTTTGGGATCTCCGCACGGACCG‑GCCCTTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCa                                                                               <  1:265972/149‑1 (MQ=255)                                                                    ccTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGc                                                                           >  2:715874/1‑151 (MQ=255)                                                                            ggggAGAATTGGGGGTGGTTACCATCCAGAAAACTCCCCCCCTGTTGGGGGATACCCGCAGGACCCG‑GCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgccca                                                                   <  1:527830/151‑1 (MQ=255)                                                                            ggggAGAATATGGGTTCGGTATCACCAAGAAAAACCCCCTCCTGTTTTGGAATACCCGCTTGACCCG‑GCACTTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcc                                                                     <  1:174199/149‑1 (MQ=255)                                                                             ggggggTTAGGGGGTGGGTATCATCAAGGAAAACCCCCTCTTGTTTGGGGATACCCGATTGACCCG‑GCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccat                                                                  <  1:816558/151‑1 (MQ=255)                                                                              ggaggaCATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatg                                                                 >  1:986483/1‑151 (MQ=255)                                                                                  gaTATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc                                                              >  2:724018/1‑150 (MQ=255)                                                                                    tatGGGGTCGGTATCATCCAGGAAAATCACCTCTTGTTTTGGGATATCCGCATGAACCG‑GCAACTCATACTCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcacatgcccat                                                            >  1:108787/1‑150 (MQ=255)                                                                                       gggtTCGGTTTCACCCAGAAAATTCCCCTCCTTTTTGGGGATTCCCGCGGGACCCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCgcccatgccc                                                              <  2:924011/145‑1 (MQ=255)                                                                                       ggggTCGGTACCACCCAGAAAAACCCCCTCCTGTTTGGGGATACCCGCATAACCCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTc                                                        <  2:577209/151‑1 (MQ=255)                                                                                           tCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTg                                                    >  1:598373/1‑151 (MQ=255)                                                                                             gtaatcctcCAGAAAAATCACCTCCTGTTGGGGAATATCCGCA‑AAACCGTGCCCCACAACCCCCGCCATATCGTAATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCGCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTg                                                    <  1:261959/146‑1 (MQ=255)                                                                                             ggTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgcg                                                  >  2:867503/1‑151 (MQ=255)                                                                                             ggTATCACCCAGAAAAACCCCCCCCTTTTTGGGGATACCCGCAGGACCCG‑GCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTgcg                                                  <  2:902192/151‑1 (MQ=255)                                                                                                     ccAGGAAAACCCCCTCCTGTTTGGGGATATCCGAATGAACCG‑GCCCCCCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAAt                                             <  2:477521/148‑1 (MQ=255)                                                                                                     ccAGAAAAACCCCCTCTTTTTTTGGGATACCCGCATGACCCG‑GCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGa                                           <  2:268152/150‑1 (MQ=255)                                                                                                     ccAGAAAAACCCCCTCCTTTTTTGGGATACCCGCATGAACGG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATg                                            <  2:876299/149‑1 (MQ=255)                                                                                                       agaaaaaTCCCCCCCTTTTTGGGAATACCCGCATGACCCG‑GCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATg                                            <  2:636626/144‑1 (MQ=255)                                                                                                       aGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGAcc                                         >  1:737694/1‑150 (MQ=255)                                                                                                        ggAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTg                                       >  1:1027334/1‑151 (MQ=255)                                                                                                          aaaaTCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGc                                     >  1:545611/1‑151 (MQ=255)                                                                                                                 cctcctGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTgcgcgc                              >  2:269559/1‑151 (MQ=255)                                                                                                                    cctTTTTTGGGATACCCACATAACCCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCa                             <  2:53733/149‑1 (MQ=255)                                                                                                                      tGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGttt                         >  1:790939/1‑151 (MQ=255)                                                                                                                          ttGGAATACCCGCAGGAACCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCg                      <  2:431318/150‑1 (MQ=255)                                                                                                                           tGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCgg                     >  2:330122/1‑150 (MQ=255)                                                                                                                               atacCCGCATGACCCG‑CCCCCTAATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCa                <  2:256914/151‑1 (MQ=255)                                                                                                                                  cccacaggacccG‑CCACTTCACCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAgg              <  1:871536/140‑1 (MQ=255)                                                                                                                                   ccGCTTGACCCG‑CCCCCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAg               <  1:127420/148‑1 (MQ=255)                                                                                                                                   ccGCATGACCGG‑ACCCCTAACCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGa             <  1:519242/150‑1 (MQ=255)                                                                                                                                      cATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCg         >  1:92127/1‑151 (MQ=255)                                                                                                                                       aatcagccgcccccTTATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc          <  2:175965/138‑1 (MQ=255)                                                                                                                                       aTGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGt        >  2:62794/1‑151 (MQ=255)                                                                                                                                            ccG‑GCACCTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCt     <  2:986855/149‑1 (MQ=255)                                                                                                                                             ccgcccccTCATCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGc          <  1:474207/138‑1 (MQ=255)                                                                                                                                               gcccccTCACCCCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTgca  <  2:920959/146‑1 (MQ=255)                                                                                                                                                         |                                                                                                                                            CGTTATACACCGCGTTGGCGATAGCCGCGCTCACGCCGCACAGGCCCAGCTCACCGACACCTTTGG‑CCTTCATCGGGGAGGATATGGGGTCGGTATCATCCAGGAAAATCACCTCCTGTTTTGGGATATCCGCATGAACCG‑GCACCTCATACCCCGCCATATCGTGATTAACGAAGTAGCCCAAACGGTCATCCACCGCCAGCTCCTCCATCAGTGCCGCGCCCATGCCCATAGTCATTGCGCCAATGACCTGGCTGCGCGCAGTTTTCGGATTCAGGATGCGTCCTGCA  >  NC_000913/298810‑299099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑