Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4860CA39.6% 188.7 / 56.1 111intergenic (+291/‑165)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base C (50/17);  new base A (0/44);  total (50/61)
Fisher's exact test for biased strand distribution p-value = 3.45e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 114 total aligned reads displayed.

TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636
                                                                                                                                                        |                                                                                                                                                      
  ttgttgTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACaa                                                                                                                                                      >  1:796802/1‑150 (MQ=255)
   tgttgtTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACaaa                                                                                                                                                     >  1:508855/1‑150 (MQ=255)
     ttgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAaat                                                                                                                                                   <  2:806189/150‑1 (MQ=255)
      tgttTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAaata                                                                                                                                                  >  1:63109/1‑150 (MQ=255)
        ttttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAaataat                                                                                                                                                <  2:667573/150‑1 (MQ=255)
        ttttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAaataat                                                                                                                                                <  2:667561/150‑1 (MQ=255)
         tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAatat                                                                                                                                              >  1:963053/1‑151 (MQ=255)
          ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAatat                                                                                                                                              <  2:286252/150‑1 (MQ=255)
          ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAatat                                                                                                                                              >  1:941359/1‑150 (MQ=255)
           tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                             >  2:265719/1‑150 (MQ=255)
               gTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                        <  1:605981/151‑1 (MQ=255)
                 aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                       <  2:869894/150‑1 (MQ=255)
                  aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATcc                                                                                                                                     >  2:465785/1‑151 (MQ=255)
                     tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCg                                                                                                                                   <  1:90172/150‑1 (MQ=255)
                     tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCg                                                                                                                                   <  1:1265883/150‑1 (MQ=255)
                       tGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGcc                                                                                                                                 >  1:1191245/1‑150 (MQ=255)
                        gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                <  1:875850/150‑1 (MQ=255)
                        gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCAt                                                                                                                               >  1:40475/1‑151 (MQ=255)
                             tttGGCCCACTTTTTTCTGCTCTTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCTTTTCCC‑AAAACAGGTTAGATGATTTTTTTG‑TCACTTAA‑TCCCTGTAAAACAGGCATGACCCAAAAAATAATATAAAAAATCCCGCCAt                                                                                                                               <  2:1059609/146‑1 (MQ=255)
                               tGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTg                                                                                                                        >  1:118958/1‑151 (MQ=255)
                                 gTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGAc                                                                                                                      >  1:421771/1‑151 (MQ=255)
                                  tCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATAAAAAAAATCCCGCCATTAAGTTGACt                                                                                                                     >  2:789110/1‑151 (MQ=255)
                                       ttttttCTGCTTTTTTTTTTTTCTTCCATTCTTCTTGCTGCGCAACCTTTTTCA‑AAAACAGGTAAAATGTTTTTTTTG‑TCACTTAA‑TGCTTGAAAAAATTGCATGGCCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTa                                                                                                                 <  2:1264183/150‑1 (MQ=255)
                                       ttttttCTGCTCTTTTTTATTTCATGCATTTTTTTTGCGGCGAAAGCTTTTTCC‑AAAACAGGTTAAATGTTTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                  <  1:337480/149‑1 (MQ=255)
                                       ttttttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                  >  1:662555/1‑149 (MQ=255)
                                        tttttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAg                                                                                                                >  2:138950/1‑150 (MQ=255)
                                          tttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcgc                                                                                                             >  1:850197/1‑151 (MQ=255)
                                           ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                            >  2:119921/1‑151 (MQ=255)
                                            tCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                           >  1:188518/1‑151 (MQ=255)
                                             cTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                           >  1:612605/1‑150 (MQ=255)
                                                 tCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                      >  1:407603/1‑151 (MQ=255)
                                                    tttttATTTCATGCATTTTTCTTGCTGCGCAGGCGTTTTCA‑AGAACAGTTTAGATGTTTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGAGCCACAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                      <  1:1376043/148‑1 (MQ=255)
                                                    tttttATTTCATGCAATCTTCTTGCTGCGCAAGCTTTTTCC‑AAAACAGTTTAGATGATTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                      <  1:571789/148‑1 (MQ=255)
                                                      ttttttCCATGCAATCTTTTTGCTGCGAATGTGTTTTCC‑AGATCAGGTTAAATCGTGTTTTTG‑TC‑CTTAAGTCCTTTTAAAACAGGCATAAGCCACAAAATATTAAAAAAACGCCCGCCATTAAGTTGACTTTTAGCTCCCATAtctca                                                                                                   <  2:1022017/149‑2 (MQ=255)
                                                       ttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                   >  1:1097655/1‑148 (MQ=255)
                                                       ttATTTAATGCAATCTTCTTGCTGCGAAAGCGTTTTCC‑AGAACAGGTTAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGAGCCACAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAg                                                                                                 <  1:751331/150‑1 (MQ=255)
                                                          tttCATGCAATCTTTTTGCTGCGAAAGCTTTTTCC‑AGAACAGTTTAGATGTTTTTTTTG‑TCGCTAAA‑TGCCTGAAAAACATGCAGGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                              <  1:606686/150‑1 (MQ=255)
                                                          tttCATGAATTCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACATGTTAAATAATTTTTTTT‑TCACTTAA‑TCCCTAAAAAACATGCATGAGCCACAAAATAAAAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                              <  2:1107889/150‑1 (MQ=255)
                                                              aTGCAATCTTCTTGCTGCGCAAGCTTTTCCC‑AGAACAGGTTAGATGATTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                         <  1:388327/151‑1 (MQ=255)
                                                                 cAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGt                                                                                      >  1:937815/1‑151 (MQ=255)
                                                                  attcttttTGCTGCGCAAGCTTTTCCC‑AAAAAAGTTTAGATGATTTTTTTG‑TCGTTAAA‑TGCCTGAAAAACATGCAGGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                            <  1:465893/142‑1 (MQ=255)
                                                                  aaTCTTTTTGCTGCGCAAGCTTTTCCA‑AAAACAGTTTAGATGATTTTTTTG‑TCTTTTAA‑TGCTTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgcc                                                                                           <  1:1319405/145‑1 (MQ=255)
                                                                      tttttGCTGCGAAAGCTTTTACC‑AGAACAGGTGAGATAATTTTTTTG‑TCGCTTAA‑TCCTTAAAAAACTTGCATGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                    <  2:1178528/145‑1 (MQ=255)
                                                                      ttcttGCGGCGCAA‑CTTTTTCCAAGACCAGTTTAAATGATTTTTTTG‑TCGATTAA‑TCCCTATAAAACATGAATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTg                                                                                   <  2:1097664/149‑1 (MQ=255)
                                                                       tcttGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                 >  1:19249/1‑150 (MQ=255)
                                                                        cttGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                 >  1:242047/1‑149 (MQ=255)
                                                                            ctgcGCAAGCTTTTCCA‑AAAACAGTTTAGATGATTTTTTTG‑TCGTTAAA‑TGCCTAAAAACCATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                             <  1:1158377/149‑1 (MQ=255)
                                                                             tgccaaaGCTTTTTCC‑AGAACAGGTTAAATGATTTTTTTT‑TCTCTTAA‑TGCCTTAAAAACATGAATGAGCCACAAAATAATATAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                             <  2:271300/143‑1 (MQ=255)
                                                                             tgcGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAAtt                                                                          >  1:1207350/1‑151 (MQ=255)
                                                                                 cAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                       >  2:1156438/1‑150 (MQ=255)
                                                                                  aaGCTTTTTCC‑AGAACAGTTTAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                       <  1:1236765/149‑1 (MQ=255)
                                                                                  aaGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                     >  1:858898/1‑151 (MQ=255)
                                                                                      gTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  >  1:66513/1‑150 (MQ=255)
                                                                                       ttttCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                  >  1:800071/1‑149 (MQ=255)
                                                                                        tttCCAAGAACAGGTTAAATATTTTTTTTG‑TCGTTTAA‑TGCCTAAAAAACATGCATGCCCCAAAAAATAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                                 <  2:1078142/150‑1 (MQ=255)
                                                                                          tccaaaaaCAGGTTAGATG‑TTTTTTTG‑TCTCTTAA‑TGCCTTAAAAACAGGCATGAGCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                              <  1:747011/144‑1 (MQ=255)
                                                                                           ccaaGAACAGGTAAGATATTTTTTTGG‑TCGCTTAA‑TGCTTGAAAAACATGCATGACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                             <  1:963616/148‑1 (MQ=255)
                                                                                           cc‑AGAACAGGTTAGATGTTTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                             <  1:864564/150‑1 (MQ=255)
                                                                                            c‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                               >  1:540588/1‑147 (MQ=255)
                                                                                              aaaaCAGTTTAGTTGTTTTTTTTG‑TCGCTTAA‑TGCTTAAAAACCATGCTTGACCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                             <  1:1079565/146‑1 (MQ=255)
                                                                                              aaaaCAGTTTAGATGATTTTTTTG‑TCGCTTAA‑TCCCTGAAAAACAGGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                          <  1:588063/149‑1 (MQ=255)
                                                                                              aGAACGGTTTAGATAATTTTTTTG‑TCGTTTAA‑TGCCTAAAAAACATGTATGAGCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                                            <  1:1156300/149‑1 (MQ=255)
                                                                                               gAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                         >  2:1110158/1‑151 (MQ=255)
                                                                                                aaaagtttAGAT‑ATTTTTTTGATCGCTTAC‑GCCCTAAAAAACAGCCATCACCAACAAAATAATAAAAAAAAGCCCGCCATTAAGTTGACTTTTAGCGCCCATATCGCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                              <  2:787930/139‑1 (MQ=255)
                                                                                                aaCGGGTAAGATGTTTTTTTTG‑TCGTTTAA‑TCCCTGAAAAACAGGAATGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                        <  2:357104/151‑1 (MQ=255)
                                                                                                aaCAGTTTAGATATTTTTTTTT‑TGGCTTAA‑TGCCTAAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                        <  2:253045/151‑1 (MQ=255)
                                                                                                aaCAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                        >  1:600503/1‑151 (MQ=255)
                                                                                                    gtttAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGTAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                    <  1:451043/149‑1 (MQ=255)
                                                                                                      ttAGATGTTCTTTTTG‑TCTCTTAA‑TGCCTATAAAACAGGCAGGGGCCAAAAAATAATAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCa                                                      <  2:869183/147‑1 (MQ=255)
                                                                                                          ataatttttttG‑TCGCTTAA‑TGCCTTAAAAACATTCATGAACAAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAttt                                               <  2:599220/144‑1 (MQ=255)
                                                                                                           tgttttttttG‑TCGTTTAA‑TGCTTAAAAAACATGCTTGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                <  1:1230980/143‑1 (MQ=255)
                                                                                                           tgatCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTAc                                             >  2:1203344/1‑151 (MQ=255)
                                                                                                             atCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                           >  2:1018558/1‑151 (MQ=255)
                                                                                                              tCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          >  2:1068393/1‑151 (MQ=255)
                                                                                                              tCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                          >  1:405599/1‑151 (MQ=255)
                                                                                                               cTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTACGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                           >  2:556033/1‑149 (MQ=255)
                                                                                                                  tttG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                       >  1:1262282/1‑150 (MQ=255)
                                                                                                                   ttG‑TCGTTAAA‑TGCCTGAAAAACATGCATGAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                      <  1:1099646/150‑1 (MQ=255)
                                                                                                                   ttG‑TCGCTTAA‑TGCCTGAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                      <  1:419233/150‑1 (MQ=255)
                                                                                                                     g‑TCGCTTAA‑TGCCTGTAAAACGTGATTGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                    <  2:24703/150‑1 (MQ=255)
                                                                                                                        cGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                 >  2:1136624/1‑151 (MQ=255)
                                                                                                                             aa‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                             >  1:777230/1‑150 (MQ=255)
                                                                                                                             aa‑TGCCTGAAAAACATGCATGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                            <  1:774424/151‑1 (MQ=255)
                                                                                                                              atgccttatAAAACTTGCATGACCAAAAAAATAAAAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                    <  2:855487/135‑1 (MQ=255)
                                                                                                                               atgcttaaaaaaCATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTaa                           <  1:1106324/143‑1 (MQ=255)
                                                                                                                                  cttatAAAACAGGAATGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                         <  2:10953/146‑1 (MQ=255)
                                                                                                                                   ttttataaCATGCATGAGTTACAAAATAATATAAAAAATAATGCCATTAAGTTTACTTTAAGCGCCCATATCAATAGAATGCCGCCGTTAGCAAGAAATTCACTGGTAATCAGATTTGCAGTTATTTCCGTCATCATTGTGAATTAatat                        >  2:1249357/7‑150 (MQ=255)
                                                                                                                                    taaaaaaCTTGAATGAACCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                        <  2:463500/146‑1 (MQ=255)
                                                                                                                                      tAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCACATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                     >  2:1211429/1‑150 (MQ=255)
                                                                                                                                       aaaaCATGCATGAGCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa                    <  1:181691/150‑1 (MQ=255)
                                                                                                                                       aaaaCATGCATGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                         <  2:264783/145‑1 (MQ=255)
                                                                                                                                       aaaaCATGCAGGACCAAAAAAATAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa                   <  1:138978/151‑1 (MQ=255)
                                                                                                                                       aaaaCATCATTGAGCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                       <  1:789675/147‑1 (MQ=255)
                                                                                                                                         aaCATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTAACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                  >  2:791951/1‑150 (MQ=255)
                                                                                                                                         aaCATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                 <  1:863206/151‑1 (MQ=255)
                                                                                                                                          aCATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                <  2:66494/151‑1 (MQ=255)
                                                                                                                                                 tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt         >  1:1061266/1‑151 (MQ=255)
                                                                                                                                                    gCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAgtgagtga       >  1:417627/1‑150 (MQ=255)
                                                                                                                                                       acaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat   >  2:1350276/1‑151 (MQ=255)
                                                                                                                                                        caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt  >  1:1159432/1‑151 (MQ=255)
                                                                                                                                                        |                                                                                                                                                      
TTTTGTTGTTTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATT  >  NC_000913/29337‑29636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑