Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4960TA45.5% 132.5 / 64.8 112intergenic (+301/‑155)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base T (46/15);  new base A (1/50);  total (47/65)
Fisher's exact test for biased strand distribution p-value = 4.27e-17
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 119 total aligned reads displayed.

TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGG  >  NC_000913/29346‑29645
                                                                                                                                                         |                                                                                                                                                     
tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAatat                                                                                                                                                       >  1:963053/1‑151 (MQ=255)
 ttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAatat                                                                                                                                                       >  1:941359/1‑150 (MQ=255)
  tAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAAtata                                                                                                                                                      >  2:265719/1‑150 (MQ=255)
      gTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                                 <  1:605981/151‑1 (MQ=255)
        aaaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                                <  2:869894/150‑1 (MQ=255)
         aaTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATcc                                                                                                                                              >  2:465785/1‑151 (MQ=255)
          aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                             <  1:259719/151‑1 (MQ=255)
           ttttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGTTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATACAAAATccc                                                                                                                                             >  2:884677/1‑150 (MQ=255)
            tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCg                                                                                                                                            <  1:90172/150‑1 (MQ=255)
            tttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCg                                                                                                                                            <  1:1265883/150‑1 (MQ=255)
              tGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGcc                                                                                                                                          >  1:1191245/1‑150 (MQ=255)
              tGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGcc                                                                                                                                          >  2:149084/1‑150 (MQ=255)
               gACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCa                                                                                                                                         <  1:875850/150‑1 (MQ=255)
                    tttGGCCCACTTTTTTCTGCTCTTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCTTTTCCC‑AAAACAGGTTAGATGATTTTTTTG‑TCACTTAA‑TCCCTGTAAAACAGGCATGACCCAAAAAATAATATAAAAAATCCCGCCAt                                                                                                                                        <  2:1059609/146‑1 (MQ=255)
                      tGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTg                                                                                                                                 >  1:118958/1‑151 (MQ=255)
                              ttttttCTGCTTTTTTTTTTTTCTTCCATTCTTCTTGCTGCGCAACCTTTTTCA‑AAAACAGGTAAAATGTTTTTTTTG‑TCACTTAA‑TGCTTGAAAAAATTGCATGGCCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTa                                                                                                                          <  2:1264183/150‑1 (MQ=255)
                              ttttttCTGCTTTTTTTTATTTCAGGAAATCTTCTTGCGGCGAAAGCTTTTCCC‑AAAACAGGTAAGAGGATTTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACttt                                                                                                                            <  1:677809/148‑1 (MQ=255)
                              ttttttCTGCTCTTTTTTATTTCATGCATTTTTTTTGCGGCGAAAGCTTTTTCC‑AAAACAGGTTAAATGTTTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                           <  1:337480/149‑1 (MQ=255)
                               tttttCTGCTTGTTTTTTTTTCATGCATCTTTTTTGCGCCAAAAGTGTTTACA‑AAAACAGGTTAGTTAATTTTTTTT‑CCGTTTAA‑TCCTTATAAAACATGCATGCTACAAAAAATAATATAAAAATTCCCGCCATTAAGTTGACTTTTa                                                                                                                          <  2:1083444/149‑1 (MQ=255)
                                 tttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcgc                                                                                                                      >  1:850197/1‑151 (MQ=255)
                                  ttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGcc                                                                                                                     >  2:119921/1‑151 (MQ=255)
                                   tCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                                    >  1:188518/1‑151 (MQ=255)
                                    cTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGccc                                                                                                                    >  1:612605/1‑150 (MQ=255)
                                        tCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                               >  1:407603/1‑151 (MQ=255)
                                           tttttATTTCATGCATTTTTCTTGCTGCGCAGGCGTTTTCA‑AGAACAGTTTAGATGTTTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGAGCCACAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                               <  1:1376043/148‑1 (MQ=255)
                                           tttttATTTCATGCAATCTTCTTGCTGCGCAAGCTTTTTCC‑AAAACAGTTTAGATGATTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATAtc                                                                                                               <  1:571789/148‑1 (MQ=255)
                                             ttttttCCATGCAATCTTTTTGCTGCGAATGTGTTTTCC‑AGATCAGGTTAAATCGTGTTTTTG‑TC‑CTTAAGTCCTTTTAAAACAGGCATAAGCCACAAAATATTAAAAAAACGCCCGCCATTAAGTTGACTTTTAGCTCCCATAtctca                                                                                                            <  2:1022017/149‑2 (MQ=255)
                                             tttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                            >  1:588363/1‑149 (MQ=255)
                                              ttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                            >  1:1097655/1‑148 (MQ=255)
                                              ttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                            >  1:421105/1‑148 (MQ=255)
                                              ttATTTAATGCAATCTTCTTGCTGCGAAAGCGTTTTCC‑AGAACAGGTTAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGAGCCACAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAg                                                                                                          <  1:751331/150‑1 (MQ=255)
                                                 tttCATGCAATCTTTTTGCTGCGAAAGCTTTTTCC‑AGAACAGTTTAGATGTTTTTTTTG‑TCGCTAAA‑TGCCTGAAAAACATGCAGGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                       <  1:606686/150‑1 (MQ=255)
                                                 tttCATGAATTCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACATGTTAAATAATTTTTTTT‑TCACTTAA‑TCCCTAAAAAACATGCATGAGCCACAAAATAAAAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                       <  2:1107889/150‑1 (MQ=255)
                                                     aTGCAATCTTCTTGCTGCGCAAGCTTTTCCC‑AGAACAGGTTAGATGATTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                                  <  1:388327/151‑1 (MQ=255)
                                                        cAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGt                                                                                               >  1:937815/1‑151 (MQ=255)
                                                         attcttttTGCTGCGCAAGCTTTTCCC‑AAAAAAGTTTAGATGATTTTTTTG‑TCGTTAAA‑TGCCTGAAAAACATGCAGGAGCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgc                                                                                                     <  1:465893/142‑1 (MQ=255)
                                                         aaTCTTTTTGCTGCGCAAGCTTTTCCA‑AAAACAGTTTAGATGATTTTTTTG‑TCTTTTAA‑TGCTTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgcc                                                                                                    <  1:1319405/145‑1 (MQ=255)
                                                             tttttGCTGCGAAAGCTTTTACC‑AGAACAGGTGAGATAATTTTTTTG‑TCGCTTAA‑TCCTTAAAAAACTTGCATGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                             <  2:1178528/145‑1 (MQ=255)
                                                             ttcttGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                          >  1:837771/1‑151 (MQ=255)
                                                             ttcttGCGGCGCAA‑CTTTTTCCAAGACCAGTTTAAATGATTTTTTTG‑TCGATTAA‑TCCCTATAAAACATGAATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTg                                                                                            <  2:1097664/149‑1 (MQ=255)
                                                              tcttGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                          >  1:19249/1‑150 (MQ=255)
                                                               cttGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                          >  1:242047/1‑149 (MQ=255)
                                                                    tgccaaaGCTTTTTCC‑AGAACAGGTTAAATGATTTTTTTT‑TCTCTTAA‑TGCCTTAAAAACATGAATGAGCCACAAAATAATATAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                                      <  2:271300/143‑1 (MQ=255)
                                                                        cAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                                >  2:1156438/1‑150 (MQ=255)
                                                                         aaGCTTTTTCC‑AGAACAGTTTAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgt                                                                                <  1:1236765/149‑1 (MQ=255)
                                                                         aaGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtcg                                                                              >  1:858898/1‑151 (MQ=255)
                                                                             gTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                           >  1:66513/1‑150 (MQ=255)
                                                                              ttttCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                           >  1:800071/1‑149 (MQ=255)
                                                                               tttCCAAGAACAGGTTAAATATTTTTTTTG‑TCGTTTAA‑TGCCTAAAAAACATGCATGCCCCAAAAAATAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTaa                                                                          <  2:1078142/150‑1 (MQ=255)
                                                                                 tccaaaaaCAGGTTAGATG‑TTTTTTTG‑TCTCTTAA‑TGCCTTAAAAACAGGCATGAGCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                                       <  1:747011/144‑1 (MQ=255)
                                                                                  ccaaGAACAGGTAAGATATTTTTTTGG‑TCGCTTAA‑TGCTTGAAAAACATGCATGACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                                      <  1:963616/148‑1 (MQ=255)
                                                                                  cc‑AGAACAGGTTAGATGTTTTTTTTG‑TCGCTTAA‑TGCCTGAAAAACATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                                      <  1:864564/150‑1 (MQ=255)
                                                                                   c‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                        >  1:540588/1‑147 (MQ=255)
                                                                                     aaaaCAGTTTAGTTGTTTTTTTTG‑TCGCTTAA‑TGCTTAAAAACCATGCTTGACCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAg                                                                      <  1:1079565/146‑1 (MQ=255)
                                                                                     aGAACGGTTTAGATAATTTTTTTG‑TCGTTTAA‑TGCCTAAAAAACATGTATGAGCCAAAAAAAAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGa                                                                     <  1:1156300/149‑1 (MQ=255)
                                                                                       aaaagtttAGAT‑ATTTTTTTGATCGCTTAC‑GCCCTAAAAAACAGCCATCACCAACAAAATAATAAAAAAAAGCCCGCCATTAAGTTGACTTTTAGCGCCCATATCGCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCa                                                                       <  2:787930/139‑1 (MQ=255)
                                                                                       aaCGGGTAAGATGTTTTTTTTG‑TCGTTTAA‑TCCCTGAAAAACAGGAATGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                                 <  2:357104/151‑1 (MQ=255)
                                                                                       aaCAGTTTAGATATTTTTTTTT‑TGGCTTAA‑TGCCTAAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                                 <  2:253045/151‑1 (MQ=255)
                                                                                       aaCAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                                 >  1:600503/1‑151 (MQ=255)
                                                                                           gtttAGATGATTTTTTTG‑TCGTTTAA‑TGCCTGTAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                             <  1:451043/149‑1 (MQ=255)
                                                                                             ttAGATGTTCTTTTTG‑TCTCTTAA‑TGCCTATAAAACAGGCAGGGGCCAAAAAATAATAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCa                                                               <  2:869183/147‑1 (MQ=255)
                                                                                                 ataatttttttG‑TCGCTTAA‑TGCCTTAAAAACATTCATGAACAAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAttt                                                        <  2:599220/144‑1 (MQ=255)
                                                                                                  tgttttttttG‑TCGTTTAA‑TGCTTAAAAAACATGCTTGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAtt                                                         <  1:1230980/143‑1 (MQ=255)
                                                                                                  tgatCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTAc                                                      >  2:1203344/1‑151 (MQ=255)
                                                                                                    atCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                                    >  2:1018558/1‑151 (MQ=255)
                                                                                                     tCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtc                                                   >  1:405599/1‑151 (MQ=255)
                                                                                                      cTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTACGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGt                                                    >  2:556033/1‑149 (MQ=255)
                                                                                                         tttG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                                >  1:1262282/1‑150 (MQ=255)
                                                                                                          ttG‑TCGTTAAA‑TGCCTGAAAAACATGCATGAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                               <  1:1099646/150‑1 (MQ=255)
                                                                                                          ttG‑TCGCTTAA‑TGCCTGAAAAACATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatca                                               <  1:419233/150‑1 (MQ=255)
                                                                                                            g‑TCGCTTAA‑TGCCTGTAAAACGTGATTGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                             <  2:24703/150‑1 (MQ=255)
                                                                                                               cGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                          >  2:1136624/1‑151 (MQ=255)
                                                                                                               cGCTTAA‑TGCCTGTAAAACATGCATGAGCCAAAAAATAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtgtg                                          <  2:421131/151‑1 (MQ=255)
                                                                                                                    aa‑TGCCTGAAAAACATGCATGAGCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                                     <  1:774424/151‑1 (MQ=255)
                                                                                                                     atgccttatAAAACTTGCATGACCAAAAAAATAAAAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCAtt                                             <  2:855487/135‑1 (MQ=255)
                                                                                                                      atgcttaaaaaaCATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTaa                                    <  1:1106324/143‑1 (MQ=255)
                                                                                                                         cttatAAAACAGGAATGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                                  <  2:10953/146‑1 (MQ=255)
                                                                                                                          ttttataaCATGCATGAGTTACAAAATAATATAAAAAATAATGCCATTAAGTTTACTTTAAGCGCCCATATCAATAGAATGCCGCCGTTAGCAAGAAATTCACTGGTAATCAGATTTGCAGTTATTTCCGTCATCATTGTGAATTAatat                                 >  2:1249357/7‑150 (MQ=255)
                                                                                                                           taaaaaaCTTGAATGAACCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                                 <  2:463500/146‑1 (MQ=255)
                                                                                                                           taaaaaaCATGCATGACCAAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAatat                                 <  1:1186316/146‑1 (MQ=255)
                                                                                                                             tAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCACATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCa                              >  2:1211429/1‑150 (MQ=255)
                                                                                                                              aaaaCATGCATGAGCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa                             <  1:181691/150‑1 (MQ=255)
                                                                                                                              aaaaCATGCATGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAata                                  <  2:264783/145‑1 (MQ=255)
                                                                                                                              aaaaCATGCATGACCCACAAAAAAATATAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGc                               <  2:1180871/148‑1 (MQ=255)
                                                                                                                              aaaaCATGCAGGACCAAAAAAATAATATAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaaa                            <  1:138978/151‑1 (MQ=255)
                                                                                                                              aaaaCATCATTGAGCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                                <  1:789675/147‑1 (MQ=255)
                                                                                                                                aaCATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTAACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                           >  2:791951/1‑150 (MQ=255)
                                                                                                                                 aCATGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaa                         <  2:66494/151‑1 (MQ=255)
                                                                                                                                        tgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt                  >  1:1061266/1‑151 (MQ=255)
                                                                                                                                           gCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAgtgagtga                >  1:417627/1‑150 (MQ=255)
                                                                                                                                            caaaaaaaaaATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAgtgagtga                <  1:961310/145‑1 (MQ=255)
                                                                                                                                              acaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAatat            >  2:1350276/1‑151 (MQ=255)
                                                                                                                                               caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt           >  1:1159432/1‑151 (MQ=255)
                                                                                                                                                aaaaaaATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                 <  2:587360/144‑1 (MQ=255)
                                                                                                                                                aaaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATAtt           <  1:554102/150‑1 (MQ=255)
                                                                                                                                                 aaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct         <  1:64747/151‑1 (MQ=255)
                                                                                                                                                     aataAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg     <  1:1201637/151‑1 (MQ=255)
                                                                                                                                                      ataaAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGa    <  2:417529/151‑1 (MQ=255)
                                                                                                                                                       tataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg     >  1:324533/1‑149 (MQ=255)
                                                                                                                                                        ataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAgg  >  1:1253770/1‑151 (MQ=255)
                                                                                                                                                         |                                                                                                                                                     
TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCC‑AGAACAGGTTAGATGATCTTTTTG‑TCGCTTAA‑TGCCTGTAAAACATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGG  >  NC_000913/29346‑29645

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑