Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,895,0320TC38.9% 120.3 / 20.3 73I250V (ATT→GTT) ygcQputative flavoprotein
Reads supporting (aligned to +/- strand):  ref base T (38/6);  new base C (1/27);  total (39/34)
Fisher's exact test for biased strand distribution p-value = 5.75e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCACTCGCGCCC  >  NC_000913/2894883‑2895181
                                                                                                                                                     |                                                                                                                                                     
aGGCCAGACCCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAAt                                                                                                                                                       >  2:824839/1‑150 (MQ=255)
   ccAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGcc                                                                                                                                                   >  2:679222/1‑151 (MQ=255)
    cAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGcca                                                                                                                                                  <  1:122256/151‑1 (MQ=255)
    cAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGcc                                                                                                                                                   >  1:91409/1‑150 (MQ=255)
        aCCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCcaccac                                                                                                                                              >  2:261095/1‑151 (MQ=255)
          cGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACaa                                                                                                                                            <  1:940966/151‑1 (MQ=255)
                 aGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCt                                                                                                                                     <  1:1182127/151‑1 (MQ=255)
                  ggATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTa                                                                                                                                    <  1:1242510/151‑1 (MQ=255)
                       atcCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCg                                                                                                                               >  1:324947/1‑151 (MQ=255)
                       atcCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCg                                                                                                                               <  1:727039/151‑1 (MQ=255)
                         ccGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGt                                                                                                                              >  1:878680/1‑150 (MQ=255)
                              aaCACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTAcgccc                                                                                                                        >  2:887729/1‑151 (MQ=255)
                                 acGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTAcgcccgcc                                                                                                                     >  1:531034/1‑151 (MQ=255)
                                   gTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCAt                                                                                                                   >  1:811956/1‑151 (MQ=255)
                                     tcttGGCAATCTGCGTTAATGATTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAGCATCTGCCTCTGAAAATACTGCAGCGCTGGCGTCATGATTAACCGCCACCACAATCGTGCTATTGCGCACGCCCGCCAt                                                                                                                   >  2:877793/3‑149 (MQ=255)
                                               cTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCtgctgc                                                                                                       >  2:683066/1‑151 (MQ=255)
                                               cTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCtgctgc                                                                                                       >  2:401091/1‑151 (MQ=255)
                                                tGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTgcg                                                                                                      >  1:815413/1‑151 (MQ=255)
                                                  cGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGcc                                                                                                    >  1:34390/1‑151 (MQ=255)
                                                     gAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTgcgc                                                                                                     >  2:410851/1‑147 (MQ=255)
                                                        tttttGTCCCCGGTCCCCCCACCCCCACTCTCCAGTCATCACCCCCCCCAACTTCTCCGTGTAAAAATCCCGCGGCGCGGGCGTAATATTTAACCCCCCCCAAAACTTTGTTTTTGCGTCCGCCCGCCATTAACGCTGCTgcgc                                                                                                     <  1:511003/142‑1 (MQ=255)
                                                          tttGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAgcgc                                                                                            >  1:953881/1‑151 (MQ=255)
                                                          tttGCCCCCAGCCCCCCCAGCCCCACTTCCCACACAACACCCACCCAACCATCTCCCTGAAAAAACCCCGCCGCGCGGGCGTTATTTTAACCCCCCCCCACAAACTTGTTTTTGCGTCCCCCCGCCATTAACGCTGCTGCGCCAGAAg                                                                                               <  2:1298774/148‑1 (MQ=255)
                                                           ttGTCCCCATCGCCCCCAGCCCCCCTTCCCAGTCCCCACCCCCGCCAACATCTGCCTGGGAAAACACCGCAGCGCTGGCGTAATGATTAACCCCCACCAAAACTTTGGTATGGCTTCCGCCCGCCATTAACGCTGCTGCGCCa                                                                                                   <  2:1244176/143‑1 (MQ=255)
                                                             gTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCca                                                                                          >  1:871105/1‑150 (MQ=255)
                                                              tCAACAGTGCCTCCAGCACCACTTTTCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCGGCGCTGGCTTCATGATTAATCGCCACCTTAAACTTGCTATTGCGTACGCCCGCCATTAACGCTTCCGCCCCAGa                                                                                                 >  2:587220/1‑142 (MQ=255)
                                                               ccccAGTCCCCCCACCCCCACTTCCCACCCATCACCCACCCCAACATCTGCCTGAAAAAATCCCGCAGCGGTGGCGTCATGATTAACCCCCACCAAAAACTTGCTATGGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCcaaca                                                                                       <  1:477897/149‑1 (MQ=255)
                                                               cACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCcaac                                                                                        >  1:1217198/1‑150 (MQ=255)
                                                               cACCAGCCCCCCCACCCCCTCTTCCCAGCCACCACCCCCCCCACCATCTGCCGGAAAAAACCCCGCGGCGCTGGCGTCATATTTAACCCCCACCAAAACCTTTCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCcaa                                                                                         <  1:828819/149‑1 (MQ=255)
                                                                       ccTCCAGCCCCCCTTCCCACTCACCACCCCCCCAACCATCGCCCTGAAAAAACCCCGCGGCGGGGGGGTCATGATAAACCCCCACCAAAACCTTGCTTTTGCGTCCACCCGCCATTAACGCTGCTGCGCCAGAAGCGCcaacaa                                                                                      <  1:241023/144‑1 (MQ=255)
                                                                         cccacccccacTTCCCAGTCACCACCCCCCCAAACCTCTCCCTATAAAAACACCGCGGCGCTGGCACAATGATTACCCCCCCCCACAAGCTTGCTATGGCCTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATacaca                                                                             <  2:732725/144‑1 (MQ=255)
                                                                          ccacccccccTTCCCAGTAACCACCCCCGCCAACTTCTGCCTGTAAAAACCCCGCGGCGCGGGCGTAATGATTAACCCCCACCAAAACCTTGCTATTGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATacaca                                                                             <  1:1341845/141‑1 (MQ=255)
                                                                          ccAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATacacac                                                                            >  1:1022999/1‑151 (MQ=255)
                                                                              ccccacTTCCCACTCACCACCCCCCCCAACATCTCCTTGTAAAAACCCCGCAGCGCTGGCGTCATGATTAACCCCCACCACAACCTTGTTTTTGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCa                                                                        <  1:1271635/149‑1 (MQ=255)
                                                                              caccacTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACGAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTc                                                                         >  2:1259408/1‑150 (MQ=255)
                                                                                ccacTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAgg                                                                      >  1:949033/1‑151 (MQ=255)
                                                                                    ttgccacacatcaACCACCCCACCTTCTGCTTGTAAAAATCCCGCGGCGCGGCCGTAATAATAAGCCCCCACCACAAACTTTCTATTGCGACCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGt                                                                     <  1:1328626/140‑1 (MQ=255)
                                                                                     ttCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGcc                                                                  >  2:934060/1‑150 (MQ=255)
                                                                                         aGTCATCAACCACGCCAACATCTACCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCcagc                                                               >  1:1356464/1‑149 (MQ=255)
                                                                                            catcaACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATg                                                          >  1:937921/1‑151 (MQ=255)
                                                                                            caccaACCACCCCAACTTCTCCCGATAAAAGTCCCGCGGCGCTGGCTTCATTATTAACCCCCACCACAAATTTTTTAGTGACTACCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGa                                                            <  2:716708/146‑1 (MQ=255)
                                                                                                  ccccGCCACCCTCCGCCTGTAAAACCCCCTCAGCGCTGGCGTCATAATACGACCCCCCCACAAACTTGCTTTTCCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGAt                                                           <  2:682603/141‑1 (MQ=255)
                                                                                                  ccACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAACCTTGCTATTGCGTACGCCCGCCATTCACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCgg                                                     >  2:568227/1‑150 (MQ=255)
                                                                                                  ccACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCgg                                                     >  1:1312382/1‑150 (MQ=255)
                                                                                                   ccccccAACACCTGCCTGGGAAATCCCCGCAGCGCGGGCTCAATAATCAACCCCCCCCACAAACTTCATATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGaa                                                   <  2:262409/147‑1 (MQ=255)
                                                                                                   cACCCCAACTTCTCCCTGAAAAAATCCCGCGGCGTTGGCGTAATGATTAACCCCCCCCAAAAATTTGTTTTGGCGTACCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGaa                                                   <  1:659195/151‑1 (MQ=255)
                                                                                                     ccccAACCTCGGCCTGAAAAAACCCCGCCGCGCTGGCGTCATGATTACCCCCCACCACAAACTTGTTATGGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGaaa                                                  <  1:1227296/148‑1 (MQ=255)
                                                                                                     cGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAAt                                                 >  2:1252441/1‑151 (MQ=255)
                                                                                                       ccAACCTCTGCCTATAAAAATCCCGCGGCGCGGGCGTCATAATTACCCCCCCCCACAAACTTTTTATGGCGCCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATa                                                <  2:177597/150‑1 (MQ=255)
                                                                                                           ccgcTGCCTGTAAAAACCCCGCACCGCTGGCTTCATGATAAACCCCCCCCACAAACTTGCTATTGCCTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATa                                                <  2:177915/143‑1 (MQ=255)
                                                                                                                 ccTGTAAAAACCCCGCAGCGCTGGCTTCATGATAAACCCCCACCACAACCTTGCTATTGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCa                                         <  1:1090086/147‑1 (MQ=255)
                                                                                                                    gtgAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTc                                  >  1:892171/1‑151 (MQ=255)
                                                                                                                     tgAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTc                                  >  2:877643/1‑150 (MQ=255)
                                                                                                                     aaaaaaccccccAGCGCGGGCCTCTTAATAATTCGCCCCCACAACCTTTCTCTGGCCTCCCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCa                                         <  1:520640/132‑1 (MQ=255)
                                                                                                                      gAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTc                                  >  1:1419/1‑149 (MQ=255)
                                                                                                                      aaaaaccccGCGGCGCTGGCTTCATGATTAACCGCCACCACAAACTTGCTTTTGCGCCCCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCa                                 <  1:975847/143‑1 (MQ=255)
                                                                                                                      aaaaaccccGCGGCGCGGGCGTAATAATTACCCCCCCCCACAACCTTTTTATTGCTTCCCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTc                                  <  1:1202903/142‑1 (MQ=255)
                                                                                                                      aaaaaTCCCGCGGCGCTGGCGTCATAATTACCCCCCACCACAAACTGGCTATTGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCa                                 <  1:709300/149‑1 (MQ=255)
                                                                                                                      aaaaaTCCCGCAGGGTTGGCGTAATATTAAACCCCCACAAAAAACTTTCTATTGCGTACCCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTc                                  <  1:1325571/148‑1 (MQ=255)
                                                                                                                       aaacccccGCGGCGCGGGCGTAATGATAAACCCCCACCAAAACCTTGCTTTGGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACtttt                                    <  1:1282116/140‑1 (MQ=255)
                                                                                                                       aaaaaaCCCCGGCGCGGGCATCATAAATACCCCCCCCAAAAAACTTGTTAGTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCa                                 <  2:1150771/149‑1 (MQ=255)
                                                                                                                              cGCAGCGGGGGCGTAATTATAAACCCCCCCCAAAATCTTGTTTTTGCTCCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCaa                          <  1:679402/149‑1 (MQ=255)
                                                                                                                               gcggcggTGGCTTCATAATTAACCCCCACACCAACCTTTCTATTGCCACCGCCCGTCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACg                        <  2:324859/147‑1 (MQ=255)
                                                                                                                                cAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGcc                      >  2:1126362/1‑151 (MQ=255)
                                                                                                                                 aGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGcc                      >  1:1126919/1‑150 (MQ=255)
                                                                                                                                 aGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGcc                      >  1:842805/1‑150 (MQ=255)
                                                                                                                                   cgcTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCAcc                   >  2:511225/1‑151 (MQ=255)
                                                                                                                                    gggggCGTAATGATAACCCCCCCCCACACCCTTGTTATGGCGCCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCa                     <  1:261158/145‑1 (MQ=255)
                                                                                                                                    gcTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCg                  >  1:465001/1‑151 (MQ=255)
                                                                                                                                       ggCGTCATAATTAACCCCCACCAAAATCTTGTTTTGGCGTCCGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTtc               <  1:401188/151‑1 (MQ=255)
                                                                                                                                            cATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCAc          >  1:449855/1‑151 (MQ=255)
                                                                                                                                                 atAATCGCCACAATAAACTTGCTATTGCGTACGACCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCACTcgc      >  2:1275911/2‑150 (MQ=255)
                                                                                                                                                  tAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCACTCgcgc    >  1:843872/1‑151 (MQ=255)
                                                                                                                                                    aTCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCACTCGCGccc  >  1:91267/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
AGGCCAGAACCGTAGGCAGGATCATCCGGCAACACGTTATTGGCAATCTGCGTGAATGTTTGTCACCAGTGCCTCCAGCACCACTTTCCAGTCATCAACCACGCCAACATCTGCCTGTGAAAATACCGCAGCGCTGGCGTCATGATTAATCGCCACCACAAACTTGCTATTGCGTACGCCCGCCATTAACGCTGCTGCGCCAGAAGCGCCAACAACAATACACACCTCAGGTGCCAGCAGATGTCCGGAAATACCAATCACTTTTTCAGCATCAACGCCACCGTTCATCACTCGCGCCC  >  NC_000913/2894883‑2895181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: