Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,536,1970AT40.0% 124.0 / 61.1 90intergenic (+166/+417)yjhR/nanSpseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
Reads supporting (aligned to +/- strand):  ref base A (3/51);  new base T (36/0);  total (39/51)
Fisher's exact test for biased strand distribution p-value = 5.28e-22
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTG  >  NC_000913/4536050‑4536340
                                                                                                                                                     |                                                                                                                                                
gATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGa                                                                                                                                               <  1:667305/151‑1 (MQ=255)
  tACAGTAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GT‑TTTTTGGTAt                                                                                                                                             >  2:1190509/1‑151 (MQ=255)
   aCAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAAt                                                                                                                                             <  1:654730/150‑1 (MQ=255)
     aGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATgaa                                                                                                                                          <  1:67470/151‑1 (MQ=255)
     aGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATgaa                                                                                                                                          <  1:500862/151‑1 (MQ=255)
        agtagtAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATgaaaga                                                                                                                                       <  1:1350727/151‑1 (MQ=255)
            gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAAt                                                                                                                                   <  2:106743/151‑1 (MQ=255)
             tcaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GG‑TTTTTTGTATTaaaaaaaa                                                                                                                                    >  2:904173/3‑149 (MQ=255)
             taAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTTTGAATGAAATaaaa                                                                                                                                    >  2:439759/1‑149 (MQ=255)
                aGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATgcaa                                                                                                                               <  1:1209008/151‑1 (MQ=255)
                aGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGC‑GC‑GTTTTTGAATGGAAGAAAAAgca                                                                                                                                >  1:933170/1‑150 (MQ=255)
                aGGGCATATGTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTACTGCTTATAAATCTTCTTGTTTACCTAATCATTATCCTTTGCATAATGCGCCTGGGATTAATGTCTTGT‑GG‑TTTTAGGACTGATAGTAAATgaac                                                                                                                               <  2:1097741/151‑4 (MQ=255)
                  ggCATATTTTGCCAATTTTAAGGCGACTTTCCGTTTTAGTGCGGGTCGGCTTTCCTCATCATAAAGCTTATTGTGGACCTAATCTTGTGCTTTTGCGTAATGCTCCTGCAATTAATGACGGGT‑GC‑TTTTAGGAATGAAAGAGAATgcaa                                                                                                                               <  2:1091875/149‑1 (MQ=255)
                  ggCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATgcaagc                                                                                                                             <  2:399941/151‑1 (MQ=255)
                    cATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTGGGATGAAAAAAAAAgcaaaca                                                                                                                            >  1:1286945/1‑150 (MQ=255)
                     atatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATgcaagcaa                                                                                                                           <  1:25492/150‑1 (MQ=255)
                          ttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataata                                                                                                                      <  1:1027010/150‑1 (MQ=255)
                          ttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataata                                                                                                                      <  2:133894/150‑1 (MQ=255)
                          ttACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataata                                                                                                                      <  1:178986/150‑1 (MQ=255)
                           tACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataatat                                                                                                                     <  1:1121407/150‑1 (MQ=255)
                           tACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataatat                                                                                                                     <  1:1261033/150‑1 (MQ=255)
                           tACCAATGTTAAGGAGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTGTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCaataattt                                                                                                                     <  2:1108541/150‑3 (MQ=255)
                            aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAACCAataatata                                                                                                                    <  2:469213/150‑1 (MQ=255)
                             ccAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAataatataat                                                                                                                  <  2:38279/151‑1 (MQ=255)
                             ccAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTTGAATTGAAAAAAAAgcacaaaaaaaaataa                                                                                                                   >  2:1149040/1‑137 (MQ=255)
                              cAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAAtaatataat‑a                                                                                                                <  1:1018165/151‑1 (MQ=255)
                               aaTGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATAtaat‑aa                                                                                                               <  1:792900/151‑1 (MQ=255)
                                  gTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATgg                                                                                                            <  1:904270/151‑1 (MQ=255)
                                  gTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATgg                                                                                                            <  1:445317/151‑1 (MQ=255)
                                   ttAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGA‑GC‑TTTTTAGAATGAAAAAAAAAGCAAGCAATAAAAtaat‑aa                                                                                                               >  2:1232374/1‑147 (MQ=255)
                                     aaGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GG‑TTTTTGGTATTAAAGAAAATACAAGCAATAATAtaat‑aa                                                                                                               >  2:19182/1‑145 (MQ=255)
                                     aaGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTGGAATGAAAAAAAAAACAAACAAAAATATAAT‑AAAggtc                                                                                                          >  1:315024/1‑148 (MQ=255)
                                          gACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAAttt                                                                                                    <  1:930379/151‑1 (MQ=255)
                                              ttCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCt                                                                                                  <  1:661798/149‑1 (MQ=255)
                                              ttCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTTGAATTAAAAAAAAAATAAACAATAAAATAAA‑AATAGCCTCATtttttt                                                                                                >  2:110439/1‑151 (MQ=255)
                                                     ttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAAcat                                                                                          <  2:1349327/150‑1 (MQ=255)
                                                       aTTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAAcatca                                                                                        <  1:170558/150‑1 (MQ=255)
                                                           cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAg                                                                                   <  1:1143179/151‑1 (MQ=255)
                                                                  ccTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GT‑TATTTTGGATTTAAGAAGAAGCAAACAATAATATAAT‑AAATTCCTTATTTTTTTTAACattatttaaca                                                                                 >  2:324184/1‑141 (MQ=255)
                                                                   cTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTTTGAATGAAAGAAAAAGCAAGCAAAAAAAAAAT‑AAAGGGCTTATTTTTTTTAAAATCATTAAGAata                                                                               >  2:1362505/1‑147 (MQ=255)
                                                                   cTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑CTTTTTGAATGAAAGAAAATGAAAACAATAAAATAAT‑AATAGCCTAATTTTTTTGAAAATTATTaaaaa                                                                                 >  1:1356853/1‑142 (MQ=255)
                                                                      tCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGC‑GG‑TTTTTGGAAAGAAAGAAAATAAAAAAAAAAAAAAAAA‑AAAGGACTTATTTCTTTgtataaaattaaaca                                                                                 >  1:692195/1‑128 (MQ=255)
                                                                        cTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTGGGATGAAAAAAAAAACAAACAATAATATAAT‑AAATGGCTAATTTTTTTTAAAAACATTAAACata                                                                               >  1:1219127/1‑142 (MQ=255)
                                                                          gATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCAGATCATCATCGTc                                                                    <  2:1101609/151‑1 (MQ=255)
                                                                              ataAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTTTGGATGAAAAAAAAAGCAAACAAAAATATAAT‑AAATGGCTAATTTTTTTTTACATCATTTAAAATATCATCATTGTCTAtt                                                                >  1:665815/1‑151 (MQ=255)
                                                                              ataAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTAtt                                                                <  2:1115101/151‑1 (MQ=255)
                                                                              ataAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTAt                                                                 <  1:326083/150‑1 (MQ=255)
                                                                                aaaTCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTTTGAATGAAAAAAAAAGCAAACAATAAAATAAA‑AAAAGGCTAATTTTTTTTAAAATCATTAAACATATCATCATCGTCTAtttt                                                              >  1:833629/1‑150 (MQ=255)
                                                                                aaaTCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTg                                                              <  2:683857/151‑1 (MQ=255)
                                                                                   tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GCTTTTTAGGAA‑GAAAAAAAATGCAAGCAAAAAAAAAAA‑AAAAGGCTAATTTTTTTTTAAATTATTAAACATATTAATATTGTCTTTTTGcc                                                            >  1:549043/1‑150 (MQ=255)
                                                                                   tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑CTTTTTGAATTTAAAAAAAAACAAGCAAATATTTAAT‑AATTGCCTCATTTTTTTTTAAATCATTTATCATattttcatcacccactttccc                                                           >  2:1339000/1‑139 (MQ=255)
                                                                                   tCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTGGAATGAAAGAAAAAGCAAAAAAAAATATAAT‑AATAGGCTAATTTTTTTTTAAATCAATAAACATAATATCATCCTCTtttt                                                               >  1:404076/1‑147 (MQ=255)
                                                                                      tATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGTCCTAATTTCTTTGAACGTCATTAAGCATATCATCAGCGTCTATGTGCCa                                                           <  2:1314894/148‑1 (MQ=255)
                                                                                      tATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGa                                                         <  1:640408/150‑1 (MQ=255)
                                                                                       aTTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGaa                                                        <  2:932545/150‑1 (MQ=255)
                                                                                       aTTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GT‑TTTTTGGGATTAAAGAAAATGCAAGCAAAAATATAAT‑AAAGGCCTAAATTTTTTTAACATCATTAAAAATATCATCATCGTCTAtttttcag                                                          >  1:548839/1‑143 (MQ=255)
                                                                                          gTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GT‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCACTAAGCATATCATCATCGTCTATTTGCCAGAATc                                                      <  1:724506/149‑1 (MQ=255)
                                                                                          gTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATcc                                                     <  1:122733/150‑1 (MQ=255)
                                                                                          gTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTGGGATGAAAAAAAAAAGAAGCAAAAATAAAAT‑AAATGCCTAATTTTTTTTAACAACATTAAACATAAAATCATTGTCTTTTTTTCAGaa                                                        >  1:142690/1‑147 (MQ=255)
                                                                                           tttACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GG‑TTTTTGGAATGAAAAAAAAAACAAGCAAAAAAATAAT‑AAAAGCCCAATTTTTTTTAACATCATTTAGCATATCATCATCGTCTATTTTTCAGAAttc                                                     >  1:1212906/1‑147 (MQ=255)
                                                                                            ttACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGt                                                   <  2:875882/150‑1 (MQ=255)
                                                                                             tACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTc                                                  <  2:308257/150‑1 (MQ=255)
                                                                                               ccTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTTGAATGAAAGAAAAAGCAAGCAAAAAAATAAA‑AAAGGCCTAATTTTTTTTTACATCATTAAGAATATCATCATCGTCTTTTTTCCCGAAACCGTCGAc                                               >  1:1103314/1‑151 (MQ=255)
                                                                                                cTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCAGTCg                                                 <  2:329139/148‑1 (MQ=255)
                                                                                                cTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑AT‑TTTTTTGATTTTAAAAAAAAACAAGCAAAAAAATAAT‑AAAAGGCTTATTTTTTTTTAAATCATTAAAAATATAATCATTGTCTCTTTTCTAGAATccctaca                                                >  2:252507/1‑144 (MQ=255)
                                                                                                cTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑CTTTTGGGATGAAAAAAAAAGCAAACCAAAATATAAA‑AAAGGGCTAATTTTTTTTAAAATCATTAAAAATATCATCATCCTCTATTTTTCAGAATACGTCGAc                                               >  1:458421/1‑150 (MQ=255)
                                                                                                 tAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGGC‑TTTTTGG‑ATGAAAAAAAAAAGAAGCAAAAAAATAATAAATGGCC‑AATTTTTTTTAACAACAATTAACAGATCATCATCGTCTCTTTTCCAGGAtaccgctac                                               >  1:810536/1‑141 (MQ=255)
                                                                                                  aaTCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACt                                              <  2:45822/149‑1 (MQ=255)
                                                                                                     cATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GG‑TTTTTGGGATGAAAAAAAAAGGAAGCAATAATATAAT‑AATAGGCTAATTTTTTTTAACAATATTAAAAATATAATAATCTTCTATTTTTCAGAAAACGCCGACTta                                            >  1:29883/1‑148 (MQ=255)
                                                                                                     cATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATaa                                         <  1:65206/151‑1 (MQ=255)
                                                                                                      aTTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GG‑TTTTTGGGATTAAAAAAAAAGCAAACAATAAAATAAA‑AATAGCCTTATTTTTTTTTAAATCATTAAACATATCATCATCGTCTTTTTTTCAGAAACCGCCGACTTTTaa                                         >  1:970641/1‑150 (MQ=255)
                                                                                                      aTTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTTGGTTGAAAGAAAAAGCAAGGAAAAATATAAT‑AAAGGCCTAATTTCTTTTTAAAACATTTAAAATATAATCATCGTCTTTTTGTCAGAAACCGTCGACTtat                                           >  2:221961/1‑148 (MQ=255)
                                                                                                            cTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTGGGATTAAAAAAAAAGCAAGGAATTAAATAAT‑AAAGGGCTTATTTTTTTTAAAAATATTAAAAAAATCATAATCGTCTATTTTTCAGAATTCGTCGCCTTATAATCTcc                                    >  2:158979/1‑149 (MQ=255)
                                                                                                            cTTTGCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTGGAATGAAAAAAAAAGCAAGCAAAAATATAAA‑AAAAGCCTAATTTTTTTTTACATCATTAAACATATCATCATCGTCTATTTTTCAAAATCCGTCCACTTATAAttccc                                    >  1:994601/1‑145 (MQ=255)
                                                                                                            cTTTGCATAATGCGCCTGGGATTAATGGCGGGC‑GC‑TTTTTGGCATTAAAGAAAAATGAAGGAAAAATAAAAT‑AATGGGATCATTTTTTTTAAAAACATTTAAAATATCATCATAGTCTATTTTTCCGAATTCGTCGACTTATAATTGcc                                    >  2:184703/1‑149 (MQ=255)
                                                                                                             tttGCATAATGCGCCTGGGATCAATGGCGGGT‑GC‑TTTTATGTATGGAAGAAAATGCCAGCAATAATATAAT‑AAAGGGCTTATTTTTTTGAAAAAAATTAAACAAATCATCAAAGTCTATTTTCCAGAATACGTTGAATTATAAACGc                                     >  2:892678/1‑147 (MQ=255)
                                                                                                               tGCACAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGaa                                <  2:1315425/150‑1 (MQ=255)
                                                                                                                gCATAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTTGAATGAAAAAAAAAGCAAACAAAAATATAAT‑AAAGGCCTAATTTTTTTTAAAATCATTAAGCATATTATCATCGTCTATTTTTCAGAAACCCGCGACCTATAATCGCCAGaa                                >  1:1073876/1‑149 (MQ=255)
                                                                                                                  aTAATGCGCCTGGGATTAATGGCGGGG‑GG‑TTTTTTGAAAGAAAAAAAAAGGAAGCAAAAATATAAT‑AATAGGCTAATTTTTTTTTAAATCATTTAGCATTTCATCATCGTCTATTTTCCAGAAACCGTCGACTTTTAAATGCCCGaa                                >  1:1143377/1‑147 (MQ=255)
                                                                                                                   tAATGCGCCTGGGATTAATGGCGGGG‑GC‑TTTTTTGGAAAAAAAAAAAAACAAACAATAAAATAAT‑AATAGCCTAATTTTTTTTTACAATATTAAACATATCATCATCGTCTTTTTTTCAGAATCCGTCGGCTTATAATTTCCAGAACGGc                            >  1:1103679/1‑150 (MQ=255)
                                                                                                                    aaTGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCat                          <  1:770462/151‑1 (MQ=255)
                                                                                                                          ccTGGGATTAAAGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAg                     <  2:99498/150‑1 (MQ=255)
                                                                                                                             gggATTAATGGCGGGTGGT‑TTTTTGAAATAAAAAAAAAACCAGGAAATAA‑ATAAT‑AATGGGCTAATTTTTTTTAAAATCATTAAAAAAATAAACATCATCTATTTTCTAGAATCCGTCGACTTATAATTACCAGAAAGGCctataaag                    >  2:59619/1‑144 (MQ=255)
                                                                                                                               gATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGt               <  1:399820/151‑1 (MQ=255)
                                                                                                                                aTTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGtg              <  1:588511/151‑1 (MQ=255)
                                                                                                                                aTTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGt               <  2:748699/150‑1 (MQ=255)
                                                                                                                                     tGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCg         >  1:91807/1‑151 (MQ=255)
                                                                                                                                        cGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAAc      <  1:1233093/151‑1 (MQ=255)
                                                                                                                                        cGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAAc      <  1:430662/151‑1 (MQ=255)
                                                                                                                                              gC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCtg  <  2:38530/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
GATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGT‑GC‑TTTTAGGAATGAAAGAAAATGCAAGCAATAATATAAT‑AATGGCCTAATTTCTTTGAACATCATTAAGCATATCATCATCGTCTATTTGCCAGAATCCGTCGACTTATAATCGCCAGAACGGCATATCAGGACGGTGCTGCGAACGCTG  >  NC_000913/4536050‑4536340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑