Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,356,201	0	T	G	37.7%	149.1 / 10.9	78	T304P (ACC→CCC)	sapA	antimicrobial peptide transport ABC transporter periplasmic binding protein
Reads supporting (aligned to +/- strand):  ref base T (5/43);  new base G (29/0);  total (35/43)
Fisher's exact test for biased strand distribution p-value = 2.10e-16
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCC  >  NC_000913/1356054‑1356351                                                                                                                                                    |                                                                                                                                                          cGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGgtg                                                                                                                                                          <  1:543419/149‑1 (MQ=255) cGTTGTCATAGGCCCACGAGGCGAGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGgtg                                                                                                                                                          >  2:436195/1‑149 (MQ=255)   ttGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGtt                                                                                                                                                        >  1:821799/1‑149 (MQ=255)    tGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTaa                                                                                                                                                      <  1:518674/150‑1 (MQ=255)    tGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTaa                                                                                                                                                      <  1:382549/150‑1 (MQ=255)     gTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTaaa                                                                                                                                                     <  2:960334/150‑1 (MQ=255)       cATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGc                                                                                                                                                  <  1:225146/151‑1 (MQ=255)         tAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGGTTAATggc                                                                                                                                                 >  1:1228116/1‑148 (MQ=255)           ggCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGa                                                                                                                                              <  2:908417/151‑1 (MQ=255)           ggCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAAGCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGTCGGTGTTAAATGCCAGa                                                                                                                                              <  2:1633319/151‑1 (MQ=255)            gCCCACGAGGCGCGCTGTAAAATAGATGCCTCCGTTTCAGCCGTACCAGAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGTACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGAt                                                                                                                                             <  2:1277636/151‑1 (MQ=255)            gCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGGGGGGGTAAAAGcc                                                                                                                                                 >  1:561163/1‑147 (MQ=255)               cACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGTTAAAAGCCAGATa                                                                                                                                            >  1:407746/1‑149 (MQ=255)               cACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGGTAAATGCCAGATa                                                                                                                                            >  1:580307/1‑149 (MQ=255)                   aGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGTTAAATGCCAGa                                                                                                                                              >  1:1405688/1‑143 (MQ=255)                        cgcgGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGGTTTGCGGGGGTTAATGCCAGATAAGCGACggtt                                                                                                                                  >  2:299409/1‑147 (MQ=255)                             tAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGGTTAATAACAGAAAgggggaggttaacccc                                                                                                                            >  2:1160887/1‑137 (MQ=255)                              aaaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGGGGGGTTTAAAGCCAGATAGGCGGCG‑GTCA‑Tccc                                                                                                                           >  1:111833/1‑149 (MQ=255)                              aaaaTAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCa                                                                                                                          <  1:604329/150‑1 (MQ=255)                                   agagGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGTTAAAAGCCCGATAGGGGACG‑GTCC‑Tccc                                                                                                                           >  1:1443786/1‑144 (MQ=255)                                            cgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTaaa                                                                                                           <  2:1495949/151‑1 (MQ=255)                                            cgTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGGTAAATGCCAGAGAAGCGACG‑GTCA‑CCCCAGGACGCCGCGTTa                                                                                                             >  2:535609/1‑149 (MQ=255)                                             gTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGGGGGGGTTAATACCAAATAGATGACG‑TTCATTCCCAgccggccggttaaa                                                                                                            >  2:1239422/1‑137 (MQ=255)                                              tttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGGTTAAAGCCAGATAGGGGACG‑TTCA‑TCCCAGGACGCAGCGTTAAAc                                                                                                          >  2:1036618/1‑150 (MQ=255)                                               ttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGGGGGGTTTAATGCCAGATAGGCGACG‑TTCA‑TCCCCGGACGCAGCGGTaaa                                                                                                           >  1:686116/1‑148 (MQ=255)                                               ttCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACg                                                                                                         <  2:193389/150‑1 (MQ=255)                                                     cGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGTTAAATGCCAAATAGGCGACG‑TTTA‑TCCCCAGACGCAGCGGTTAAAGCAAacg                                                                                                   >  2:967110/1‑150 (MQ=255)                                                     cGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAgcgc                                                                                                  <  2:835437/151‑1 (MQ=255)                                                      ctACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGGTAAAAGCCAGATAGGCGGCG‑TTCC‑TCCCAGGGCGCAGCGTTTAAAGCaa                                                                                                      >  1:1161803/2‑146 (MQ=255)                                                       tACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGGGGGGTTAAAAGCCCGATTCGCGGAG‑GTCA‑TTCCCGGGCGCCAGGGTCAACGCAAGAGCg‑g                                                                                               >  1:1206653/1‑151 (MQ=255)                                                        aCCATAATAGATGGATTGCATCAGGCGCTGGGTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGAGTATTGAGCGGCGGTTTGGCGGTGTTAAATGCCCGATAGGCGCCG‑TGCA‑TCCCAGGACGCAGCGTTAAACGCAATcgcg                                                                                                 <  2:514636/149‑1 (MQ=255)                                                         ccATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑Ggt                                                                                             <  1:638044/151‑1 (MQ=255)                                                              ataGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGATTGGCGGGGTTTAATGCCCGATATGCGACGTTTCG‑CCCCAGG‑CGCCGCGTTAAAAGCAAGCGCg‑g                                                                                               >  1:37962/1‑144 (MQ=255)                                                               taGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCa                                                                                        <  2:269672/150‑1 (MQ=255)                                                                 gATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGTTAAATGCCAGATAAGCGACG‑TTTA‑TCCCCGGACGCAGCGGTTAACGCAAGCGCG‑GGGCGTCAc                                                                                       >  1:1538477/1‑149 (MQ=255)                                                                   tGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGGGGGGTTTAATGCCAGATAGGCGGCG‑GTCA‑TTCCAGGGCGCAGCGGTTAAAGCAAGCGCG‑Gggcgtccc                                                                                       >  1:602799/1‑145 (MQ=255)                                                                      aTTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGGTTAAAGCCAGATAGGCGGCG‑TTCC‑TCCCCGGACGCCGGGGTTAAAGCAAACGCG‑GGGCGGCACGCaaa                                                                                  >  1:864132/1‑149 (MQ=255)                                                                         gCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGa                                                                             <  2:140466/151‑1 (MQ=255)                                                                          cATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGa                                                                             <  1:1039602/150‑1 (MQ=255)                                                                            tCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGGGGGGGTTAATGCCAGATAAGCGGCG‑TTTA‑TCCCCGGACGCAGCGTTAAACGCAAGCGCG‑GGGGGGCACGCaaaa                                                                                 >  1:784327/1‑144 (MQ=255)                                                                              aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAgct                                                                        <  1:1521716/151‑1 (MQ=255)                                                                              aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGGTAAAAGCCAGATAGGCGACG‑TTCA‑TCCCCGGACGCCGCGTTAAAAGCAAACGCG‑GGGCGGCACGCAAAATGGATa                                                                           >  1:829729/1‑148 (MQ=255)                                                                              aGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGGTTTGCGGGGGTTAATGGCCAATAAGCGACG‑GTCA‑TCCCACGACGCCGCGGTTAACGCAAGCGCG‑GGTGGTTCCGCGAAATGGAAAgc                                                                         >  1:1120551/1‑150 (MQ=255)                                                                                     ggTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGGGTTTAATGCCAGATAAGCGACG‑GTCA‑TCCCCGGACGCAGCGTTAAAAGCAAGCGCG‑GGGCGTCACGCCAAAAGGATAGcttgctgg                                                                  >  1:1100066/1‑150 (MQ=255)                                                                                      gTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGGTAAAAGCCAGAAAGGGGAAG‑TTCA‑TCCCCGGACGCACAGGTAAAAGGAAGCGCG‑GGGCGGTACGCAAAATGGGTa                                                                           >  2:904181/1‑140 (MQ=255)                                                                                      gTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGgca                                                                <  1:1569251/151‑1 (MQ=255)                                                                                        tattaATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGgcag                                                               <  2:109569/150‑1 (MQ=255)                                                                                         attaATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGgcagc                                                              <  1:1059635/150‑1 (MQ=255)                                                                                            aaTCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGGGGGGTTTAAAGGCAGAAAAGCGGCG‑TTTA‑TCCCCAGGCGCAGCGGTAAACGCCAAGGCG‑GGGCGTCACGCAAAAAGGATAggtgg                                                                      >  2:699010/1‑139 (MQ=255)                                                                                              tCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTTGCGGGGGTAAAAGACAGAAAAGGGAAG‑GTTA‑ACCCAGGGCGCCGCGCTAAACGCAAACGCG‑GGGCGTCCCGCAAAAAgggaaagtgggcgg                                                                  >  2:1460238/1‑129 (MQ=255)                                                                                              tCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGGTTTGCGGGGGTAAAACACCGAGAGGCGCAG‑TTCC‑TCCCAGGACCGAGCGTTAAACACAAACGCC‑GGTAGCCCCGCAAAAAAGTTAGGCTGCTGGcagcagc                                                           >  2:914859/1‑147 (MQ=255)                                                                                               cGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGcaggccag                                                       <  1:1150396/151‑1 (MQ=255)                                                                                                gCCACTGCCAGCGCAGGGCGGACATCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAACAGCCAGATAGGCGACG‑TTCA‑TACCAGGACGCAGCGTTGAACGCATGCGCA‑GTGCGTCGCGTACAATGGATAGCTGTCTCGCAGcaggcca                                                        <  2:205914/149‑1 (MQ=255)                                                                                                    gTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GTTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGgcaaggacag                                                  <  2:569722/151‑1 (MQ=255)                                                                                                         aGCGCATGGCGGACATCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGGTAGCTGGCTGGGAGCAGGCCAGGCCAGAACGt                                             <  2:81062/151‑1 (MQ=255)                                                                                                          gcgcATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTc                                            <  1:1037457/151‑1 (MQ=255)                                                                                                          gcgcATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTc                                            <  2:1101555/151‑1 (MQ=255)                                                                                                             cATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCa                                         <  1:290067/151‑1 (MQ=255)                                                                                                              aTGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGTGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCAt                                        <  2:367438/151‑1 (MQ=255)                                                                                                                ggCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTc                                      <  1:383858/151‑1 (MQ=255)                                                                                                                      cAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGt                                <  1:205433/151‑1 (MQ=255)                                                                                                                        gCGGGATTATTTAGCGGCGGTTTGGTGGCGTTATATACCCAATAGGGGTCC‑TTCA‑TTCCCGGACGGAGCGGTAAACGCAAGAGCGCGGTGGGC‑CCCAAAATGGGGAGCTGGCTGGCAGCAGGCCAGGGCCGAACgcccgccccccccggc                               >  2:103687/1‑135 (MQ=255)                                                                                                                         cGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAg                             <  1:1377602/151‑1 (MQ=255)                                                                                                                             attattTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCGCGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGt                         <  1:704612/151‑1 (MQ=255)                                                                                                                             attattTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGt                         <  1:440225/151‑1 (MQ=255)                                                                                                                             attattTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGt                         <  2:908766/151‑1 (MQ=255)                                                                                                                             attattTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGt                         <  1:1327699/151‑1 (MQ=255)                                                                                                                                attTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGttt                       <  2:919697/150‑1 (MQ=255)                                                                                                                                  ttAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCg                     <  1:210264/150‑1 (MQ=255)                                                                                                                                   tAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGa                    <  1:292721/150‑1 (MQ=255)                                                                                                                                    aGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACa                  <  1:20260/151‑1 (MQ=255)                                                                                                                                     gcggcgGTTTGGCGGGGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGGCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGAc                   >  1:182330/1‑149 (MQ=255)                                                                                                                                      tggcggTCTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGAc                   >  2:566588/2‑148 (MQ=255)                                                                                                                                      cggcggTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGa                    >  2:1519765/1‑147 (MQ=255)                                                                                                                                          ggTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTc            >  2:1327970/1‑151 (MQ=255)                                                                                                                                           gTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTcc           <  1:1506727/151‑1 (MQ=255)                                                                                                                                              tGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑GCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCgg         <  2:873292/150‑1 (MQ=255)                                                                                                                                               ggCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGt        <  1:1633604/150‑1 (MQ=255)                                                                                                                                               ggCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTg       <  1:908705/151‑1 (MQ=255)                                                                                                                                                  ggTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTgccg    >  1:1228127/1‑151 (MQ=255)                                                                                                                                                   gtgtTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTgccgc   >  2:257179/1‑151 (MQ=255)                                                                                                                                                    tgtTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTgccgcc  >  1:362795/1‑151 (MQ=255)                                                                                                                                                    tgtTAAATGCCAGATAGGCGACG‑GTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTgccg    <  2:1248764/149‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                          CGTTGTCATAGGCCCACGAGGCGCGCGGTAAAATAGAGGCCGCCGTTTCAGCCGTACCATAATAGATGGATTGCATCAGGCGCTGGTTATTAATCGCCAGTGCCAGCGCATGGCGGACAGCGGGATTATTTAGCGGCGGTTTGGCGGTGTTAAATGCCAGATAGGCGACG‑TTCA‑TCCCAGGACGCAGCGTTAAACGCAAGCGCG‑GGTCGTCACGCAAAATGGATAGCTGGCTGGCAGCAGGCCAGGCCAGAACGTCGCATTCCCCGGTCAGGAGTTTCGACAGACGTCCGGTGCCGCC  >  NC_000913/1356054‑1356351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑