| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,415,786 | 0 | A | C | 37.8% | 123.7 / 18.1 | 75 | V534G (GTG→GGG) | recE | Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease |
| Reads supporting (aligned to +/- strand): ref base A (39/7); new base C (1/27); total (41/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.10e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTCATCACTGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCTGGTACACACAATC > NC_000913/1415641‑1415931 | tgcctcaCTGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCGCTTCATCGAATGTTC‑CCTGG‑TGTGTTGCGTCGCCCATCACCg < 2:531321/145‑1 (MQ=255) catcaCTGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑cacc < 1:282785/151‑1 (MQ=255) caCTGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACcaca < 2:686780/151‑1 (MQ=255) tGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTc > 1:793118/1‑151 (MQ=255) aaTCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAgg > 2:582524/1‑151 (MQ=255) tCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCCCAGTCAGGGc > 2:1277913/1‑151 (MQ=255) cgcgATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCa < 1:491056/151‑1 (MQ=255) gcgATGCGGATCGCTGCTAGCATTCTCATTGTGCGAATGTTCAGAGACTCGCA‑TTTCCTCCGGATAATTTTCCGTAGCTTCAACCTGACTCTCTTCATCGAATGCTT‑CCTGG‑TATGTTGCGTCGCCCATCGCCG‑CACCACAgcaagcg > 2:166539/1‑142 (MQ=255) gATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCACCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCCTCCTCGAAAGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACTACAGTCAGGGCa < 2:39311/148‑1 (MQ=255) aTGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGtt > 1:1444845/1‑150 (MQ=255) tGCGGCTCGCTGCCAGCTTTCTCATTGTGCGGATGTTCAGCGTCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGACTGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACCGTCAGGGCAGTTAt > 2:478209/1‑151 (MQ=255) cGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATcc > 2:1540727/1‑151 (MQ=255) gATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATcccc > 2:694336/1‑151 (MQ=255) aTCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCg > 1:782234/1‑151 (MQ=255) tCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCg < 2:332326/150‑1 (MQ=255) tCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCg < 2:721210/150‑1 (MQ=255) cTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCCCCG‑CACCACAGTCAGGGCAGTTATCCCCGCCa < 2:874759/150‑1 (MQ=255) cTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGcc > 1:227087/1‑149 (MQ=255) ttCTCATTGTGCGGCTGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGTATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCGGCCAGTCTGGCCGc > 2:1090486/1‑151 (MQ=255) tctcATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGc > 1:1431966/1‑150 (MQ=255) ttGTGGGGTTGTTCAGCCCCTTCCT‑TTCCCCCCGGATCTTTTTCTTTACCTCAACCCTGCCTCTCTCCATCAAATTTTT‑CCTGT‑TATTTGGCGCCCCCCCCCCCCG‑CCCCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGc < 1:59061/149‑1 (MQ=255) ggggATTTTCAGCGCCTTCCA‑TTCCCTCCGGATCTTTTTCCTTACCTTCACCCTGCCTCTCTTCATCGATTTTTT‑CCTGG‑TTTGTTGCGCCCCCCATCCCCG‑CCCCACAGTCAGGGCATTTATCCCCGCCAGTCTGGCCGCAGGCATTGCa < 1:784779/149‑1 (MQ=255) gCGGTTTTTCGGCCCCTCCCA‑TTTCCCCCGGATCATTTCCCTTAGCTTCACCCCGCCCCTCTCCA‑CAAATTTTTCCCTGT‑TAGTTGGCGCCGCCCCCCCCCG‑CCCCACGGTCAGGGCATTTACCCCCGCCAGTCTGGCCGCAgg < 1:805397/144‑1 (MQ=255) tGTTCAGCGCCTTCCA‑TTTCCTCGGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCCAAGGCAtccaaggct > 2:1253369/1‑142 (MQ=255) ttcccgcccTTCCATTTTCCCCCGGTTTTTTTTCTTTACTTCCACCCTCCCTCCCTCCACCGATTTTTT‑CCGGT‑TATGTTGCGGCCCCCCCCCCCC‑CCCCACAGCCAGGGAATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTa < 2:58394/143‑1 (MQ=255) tCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTAttt > 2:282511/1‑151 (MQ=255) ccccTCCCT‑TTCCCCCCGAATCTTTTTCTTTATCTTCACCCTGCCTCTCTTCATCAATTTTTT‑CCTGG‑TATGTGGCGCCCCCCACCCCCC‑CCCCACAGTCAGGGCAGTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCg < 1:1591971/148‑1 (MQ=255) tttCCCCCGAATCTTTTTCCTTACCTCCACCCTGCCTCTCTCCACCGATTGTTT‑CCTGG‑TTTTTGGCGCCCCCCACCCCCC‑CCCCACAGTCGGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTc < 1:1066997/145‑1 (MQ=255) ttccctccGGTTCTTTTTCCTTACCTTCACCCTGCCTCTCTTCATCGATTGTTT‑CGTGG‑TATGTGGCGCCCCCCACCCCCG‑CACCACAGTCGGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTg < 1:76952/145‑1 (MQ=255) tccccccGGATCTTTTTCCTTACCAACACCCTCCCTCCCTTCACCGAGTTTTA‑CGTGG‑TGTGTGGCGCCCCCCCCCCCCC‑CCCCACAGGCGGGGCAGTTTTCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCt < 2:1492299/141‑1 (MQ=255) tcctccGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGc > 2:197562/1‑150 (MQ=255) cctccttttctttttCCTTCGCTCCACCCTGCCTCTCTCCACCTTTTTTTT‑CCTTT‑TATTTTGCGCCACCCCTGCCCC‑CCCCCCAGTCAGGGCATTGCCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTg < 1:560795/137‑1 (MQ=255) cctccGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCac > 1:447236/1‑151 (MQ=255) cctccGGATCATTTTCCTTACCTTAAACCTGCCTCTCTTCATCGAATGATT‑CCTGG‑TATATTGCGTCGCACATCACCG‑CACCACCGTCAGGGCAGTTATCACTGCCAGTCTGGCTGCAGGCATTGCAGGCTCTTTCCGGTTCCTGTTGc > 2:1277917/1‑149 (MQ=255) ctcggtttCATTTTCTTTAGCTTAACCCTGCCTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGCCGCCCATCCCCG‑CCCCACAGTCGGGGCAGTTCCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTg < 1:357572/140‑1 (MQ=255) ctccGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCact > 1:572216/1‑151 (MQ=255) ctccGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCact > 1:421162/1‑151 (MQ=255) tcgtgttctttttCTTTAACTCAACCCTGTCTCTCTTTATCGAATTTGC‑CCTGG‑TATTTGGCG‑CCCCCAACCCCGCCCCCAAAGACAGGCCATTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGt < 1:1030562/135‑1 (MQ=255) aTCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGc > 2:1473659/1‑151 (MQ=255) aTCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGc > 2:34895/1‑151 (MQ=255) tCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCt > 2:1306112/1‑151 (MQ=255) ttttCTTTAGCTCCACCCTGCCTCTCTTCATCGATTTTTT‑CCTGG‑TTTGTTGCGCCCCCCACCCCCC‑CCCCACAGGCAGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTc < 1:1048981/149‑1 (MQ=255) ttttCCTTAGCTCCACCCTGCCCCTCTCCATCGATTTTTT‑CTTGG‑TTTGTTCCGTCCCCCCCCCCCG‑CCCCACGGTCAGGGCATTTCTCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCa < 2:456460/150‑1 (MQ=255) ttttCCTTACCTCCACCCTGCCTCTCTTCATCGAATTTTT‑CCTGT‑TATTTTGCGCCCCCCACCCCCC‑CCCCACAGTCAGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCa < 1:1390446/150‑1 (MQ=255) tttcCCTTACCTACACCCTGCCTCTCTTCATCGAATTTTT‑CTGGT‑TTTGTGGCGCCCCCCACCCCCC‑CCCCACAGTCGGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCt < 1:680207/148‑1 (MQ=255) tttCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAgg > 1:730543/1‑151 (MQ=255) ttCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAgg > 2:1584692/1‑150 (MQ=255) ccTTATCTTCAACCTGACTCTCTTCACCGATTGTTT‑CTTGG‑TATGTTGCGTCGCCCACCCCCG‑CCCCACAGTCGGGGCAGTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGtt < 1:1129615/150‑1 (MQ=255) ccTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTg > 1:1061968/1‑151 (MQ=255) ttACCTTCAACTTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCCCCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCCGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTCCCCTACTGGCCCAGGtt > 2:203370/1‑148 (MQ=255) aGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTc > 2:779450/1‑151 (MQ=255) cTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCat > 1:761706/1‑151 (MQ=255) aaCCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCt > 1:399245/1‑151 (MQ=255) ccTGTCTCCCTTCACCAAAT‑TTT‑CCGGGTTTTGTGGCGCCCCCCATCCCCG‑CCCCAGAGCCGGGGCATTAATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTg < 1:492345/150‑1 (MQ=255) ccTGCCTCTTTTCATCAAATGTTT‑CCTGT‑TGTGTTGCTTCGCCCCCCCCCG‑CACCACAGTCGGGGCATTTCCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTgg < 1:914452/151‑1 (MQ=255) cttCGATTTTTC‑CCTGG‑TTTGTGGCGTCCCCCTCCCCCC‑CACCACGGTCGGGGCAGTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGtttt < 2:1207496/146‑1 (MQ=255) catagatttttt‑CTTGG‑TATGTGGCGCCGCCCATCCCCG‑CCCCACAGTCGGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGtttttt < 1:745300/141‑1 (MQ=255) cATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTc > 1:1050210/1‑151 (MQ=255) accGAATTTTT‑CCTGG‑TATGTTGCGCCCCCCACCCCCC‑CCCCACAGTCGGGGCATTTCCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTc < 1:250499/148‑1 (MQ=255) caaaTGTTT‑CCTGT‑TAGGTGGCCTCCCCCTCCCCCG‑CACCACAGTCGGTGCATTCTCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGttttt < 2:118991/144‑1 (MQ=255) cGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGt > 2:830870/1‑151 (MQ=255) gAATGATT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCACGGCAGTTATCCCCGCCAGTCTGGCCGCACGCACTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGACTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGtt > 2:1314767/1‑151 (MQ=255) caTGTTT‑CCTGG‑TAGGTTGCGCCGCCAGCCCCCG‑CCCAACATTCAGCGCGTTTCCCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTCTTCCg < 2:168601/147‑1 (MQ=255) ttt‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctgg > 1:1422779/1‑151 (MQ=255) tt‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctggc > 2:1453324/1‑151 (MQ=255) tt‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctggc > 1:1334341/1‑151 (MQ=255) t‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTATTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctggc > 2:397558/1‑150 (MQ=255) ccTGG‑TATGTTGCGCCCCCCACCCCCC‑CCCCACAGTCGGGGCAGTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctggct < 1:792570/150‑1 (MQ=255) tGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGt > 2:1304169/1‑151 (MQ=255) tgtttttttGCGCCCCCCACCCCCC‑CCCCACAGTGAGGGCATTTACCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTctggctg < 1:367821/142‑1 (MQ=255) tgggTTGCGCCGCCCCCCCCCG‑CCCCAAGGCCGGGGGATTCATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGtt < 1:121498/146‑1 (MQ=255) aTGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCCGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCt > 2:701189/1‑150 (MQ=255) ttGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCACGCCCGTCTGGCCGCAGGCATTGCAGGCTATTTCAGGTTCCTGTTGCCCTACTGGCTCAGGGTGATTCATCTCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCTGGt > 2:1339509/1‑150 (MQ=255) ccATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCTGGTACACACAATc > 1:1542011/1‑151 (MQ=255) ccATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCTGGTACACACAATc > 2:166592/1‑151 (MQ=255) | TTCATCACTGCAATCGCGATGCGGATCGCTGCCAGCATTCTCATTGTGCGGATGTTCAGCGCCTTCCA‑TTTCCTCCGGATCATTTTCCTTAGCTTCAACCTGACTCTCTTCATCGAATGTTT‑CCTGG‑TATGTTGCGTCGCCCATCACCG‑CACCACAGTCAGGGCAGTTATCCCCGCCAGTCTGGCCGCAGGCATTGCAGGCTATTTCCGGTTCCTGTTGCACTACTGGCTCAGGTTGATTCATATCTGGGCTGGTTTTTTCCGTTTCTGGCTGGTTCTGGTACACACAATC > NC_000913/1415641‑1415931 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |