| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,903,692 | 0 | C | A | 47.1% | 94.0 / 54.9 | 70 | intergenic (+318/+1055) | ygcE/queE | putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis |
| Reads supporting (aligned to +/- strand): ref base C (4/33); new base A (33/0); total (37/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.71e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTACAAGGAATATTAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCTTAACG > NC_000913/2903545‑2903841 | tttACAAGGAATATTAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACa > 1:770392/1‑150 (MQ=255) atTAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑Ca < 2:446139/151‑1 (MQ=255) ttAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAACACTC‑CTT‑aaaccca > 2:747450/1‑144 (MQ=255) tAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTGTTAAAAAACTC‑ATT‑A‑Acc > 2:893591/1‑146 (MQ=255) aaCTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAAAAACTC‑ATT‑A‑GCCT‑Caaa > 2:881540/1‑150 (MQ=255) aCTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAACACCC‑CTT‑A‑TCCT‑Caaaa > 2:145643/1‑150 (MQ=255) aCTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCGCTC‑ATT‑A‑GCCT‑Caaa < 1:702562/149‑1 (MQ=255) acacTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTAAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACaa < 2:709310/150‑1 (MQ=255) cGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACa < 2:805506/150‑1 (MQ=255) gTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACtt < 1:898897/151‑1 (MQ=255) gTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACtt < 2:452701/151‑1 (MQ=255) tttAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACACCC‑ATT‑A‑ACCT‑CCAaaaaaaa‑aaaaa > 2:654761/1‑145 (MQ=255) aaTAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑ttt < 2:71273/151‑1 (MQ=255) tAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTTAAAAAACCC‑ATT‑T‑ACCT‑CCAAAAAAAA‑AAAAAAATC‑CAGA‑ttttt > 1:909680/1‑149 (MQ=255) aaGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAAAACAC‑ATT‑A‑ATCT‑CCAAAAAAAA‑AAAAACTTC‑CAAA‑Ttta‑t > 1:431251/1‑148 (MQ=255) aCAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTa < 2:430998/151‑1 (MQ=255) cGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAAt < 2:254588/151‑1 (MQ=255) aaTCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGa < 1:2001/151‑1 (MQ=255) aTCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAAACACTC‑CTT‑T‑ACCT‑CCAAAAAAAA‑ACAAAAATC‑CCGA‑TTTT‑TTTC‑TTTAACaa > 2:486254/1‑147 (MQ=255) tCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAAAAACC‑ATT‑A‑TCCT‑CCAAAAAAAA‑AAAAAAATT‑CAGA‑TTTT‑TTAT‑TTAACCaa > 1:458336/1‑146 (MQ=255) gCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTGTAAAAAAAACC‑ATT‑A‑AACTACAAAAAAAAA‑AAAAACTT‑‑CAGA‑TTTT‑TTAA‑TTTACCaaaaaa > 2:536206/1‑144 (MQ=255) tATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTTAAAACCCCC‑CTT‑A‑TGCC‑CAAAAAAAAA‑ACAAACCTT‑CCGA‑TTTT‑TTTT‑TTTACCAAAGAAAAACaaac > 2:338264/1‑148 (MQ=255) aTCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCt < 1:318942/150‑1 (MQ=255) tCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTTAAAACAAAC‑ATT‑T‑TCCT‑CTAAAAAAAA‑ACAAAAATC‑CAGA‑TTTT‑TTAA‑TTTATCaacattaaaaaaa > 1:128879/1‑136 (MQ=255) cAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACACCC‑ATT‑A‑GCCT‑CCAAACAAAA‑ACAAAATTT‑CAAA‑TTTT‑TTAT‑TTAACCaaaaaaaaaaaaa > 2:289828/1‑135 (MQ=255) cAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTaa < 1:453409/151‑1 (MQ=255) aTTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAACACTC‑ATT‑A‑ACCT‑CAAAAAAAAA‑ACAAAAATT‑CCCA‑TTTA‑TTTC‑TTAAACAAATAAAAAAAAACTTaaa > 2:442717/1‑150 (MQ=255) aTTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTaaaa < 1:860275/151‑1 (MQ=255) ttttCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACACTC‑CTT‑A‑ACCTCCAAAAAAAAA‑AAAAATTTC‑CAAA‑TTTT‑TTAT‑TTAACAAATAATAAAAAACCTTaaa > 2:559605/1‑150 (MQ=255) tttCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTGTTAAAACAATCTATT‑A‑‑ACT‑TAAAAAAAAA‑AAAAAATTT‑CAGA‑TTTATTTAT‑TTAACCAA‑GAATAAAAAAAATaaaaa > 1:100352/1‑150 (MQ=255) tttCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTaaaaa < 1:931306/150‑1 (MQ=255) cACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GACT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAatat < 1:836117/151‑1 (MQ=255) ttAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAAACACCC‑ATT‑A‑ACCC‑CAAAAAAAAA‑ACAAAATTC‑CCCA‑TTTT‑TTAA‑TTTACCAAAAAATAAAAAACTTtaaaaaaa > 2:615943/1‑145 (MQ=255) tAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACt < 2:192867/150‑1 (MQ=255) aTGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTTAAAAAAATC‑CAT‑T‑TCCT‑CAAAACAAAA‑ACAAACATT‑CAAA‑TTTA‑TTAC‑TTTAACAAAGAAAAAAAAAATTAAAAAAAATACTTTTAttt > 1:393998/1‑150 (MQ=255) tGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAACACCC‑ATTAA‑CCCC‑CAAAAAAAAA‑AAAAAATTC‑CGAA‑TTTT‑TTCT‑TTAACCAA‑GAAAAAAAAACCTAAAAAAAAAAATGTtttttt > 2:269341/1‑149 (MQ=255) gAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGGTTTTTTTAAAACACCCC‑CTA‑A‑ACCC‑CAAAAAAAAA‑AAAAAATT‑‑CAGA‑TTTT‑TTTT‑TTTACAAAAAAATAAAAAAATTAAAAAAAATACTATtttttt > 1:677564/1‑148 (MQ=255) gAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTGTAAAAACAACC‑ATT‑A‑ATCT‑CAAAAAAAAA‑AAAAAAATCACAG‑‑TTTT‑TTTC‑TTTAACAAAAAATAACAAACCTAAAAAAaataattttttttt > 1:119599/1‑140 (MQ=255) gAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCt < 1:1012896/150‑1 (MQ=255) aCTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTAAAAACACCC‑ATT‑A‑ACCT‑CAAAAAAAAA‑AAAAAATTC‑CCGA‑TTTT‑TTAT‑TTAAACAAAAAAAAACAAACTTAAAAAAaataattttttttt > 2:45193/1‑138 (MQ=255) aCTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑AAAAAATTC‑CCGA‑TTTT‑TTTC‑TTTACCAAAAAAAAAAAAACTTAAAAAAAATAATTTTAtttt > 2:431673/1‑146 (MQ=255) aCTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAACACTC‑ATT‑A‑GCCT‑CAAAAAAAAA‑ACAAAATTC‑CCGA‑TTTT‑TTTC‑TTAACCAATGAAAAAAAAAATTAAAAAAAAAAATGTTAtttt > 2:97870/1‑146 (MQ=255) aCTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTaaa < 2:1032803/151‑1 (MQ=255) ggATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGaa < 1:639640/151‑1 (MQ=255) atatCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGaaaa < 2:335287/151‑1 (MQ=255) tCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATTTAAAAAAACCC‑ATT‑A‑ACCT‑CCAAAAAAAA‑ACAAAATTC‑CAGA‑TTTA‑TTAC‑TTAAACAAAGAATAAAAAACTTAAAAAAAAAAATGTTATTTTTAAGaaaaaa > 2:658296/1‑150 (MQ=255) tCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAg < 1:729315/150‑1 (MQ=255) tCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑CGTTTTAAAAACAAAC‑ATT‑A‑CCCT‑CAAAACAAAA‑AAAAACTAC‑TCGACTTTT‑TTAT‑TTAA‑CAAAGAATAAAAAAATTAAAAAATAAAATATTATTTTTTAAAAAAAATTaaaa > 1:814567/1‑147 (MQ=255) cATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGc < 2:644158/151‑1 (MQ=255) aaGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCAt < 2:1044028/150‑1 (MQ=255) aGAACTATTCATCAACAGCGTATAGAGGCGG‑TTTTTTTAAAACAATC‑ATT‑T‑TCCT‑CACAAAAAAGAAAAAAATTC‑CA‑A‑TTTT‑TTTA‑TTAAACAAAAAAAAACAAACTTAAAAAAAAAAATGTTTTTTTAAAAAAAAAAATaaaaaggatt > 2:585914/1‑142 (MQ=255) gAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTaa < 2:231864/151‑1 (MQ=255) aCTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAAtt < 2:976946/151‑1 (MQ=255) aTTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAAACACTC‑ATT‑A‑GCCC‑CCAAAAAAAA‑AAAAAATTC‑CAGA‑TTTT‑TTAC‑TTTAACAAAGAAAAAAAAACTTAAAAAAAATACTTTTATTTTTAAAAAAAAAATAACAAGCATTAAtt > 2:127809/1‑148 (MQ=255) tcatcaACAGCGTATAGAGGCGG‑TTTTTTAAAAAAACAC‑ATT‑A‑TCCT‑CCAAAAAAAA‑ACAAACATT‑CCGA‑ATTT‑TTTC‑TTTACCAAAGAATAAAAAACTTAAAAAAAATAATTTTTTTTTAAAAAAAAAAATAAAAAGCATTAATTCaa > 2:566874/1‑149 (MQ=255) tcatcaACAGCGTATAGAGGCGG‑TTATGTAAAAACACCC‑CTT‑T‑TCCC‑CAAAACAAAA‑AAAAAAATC‑CAGA‑TTTA‑TTTC‑TTAAACAATAAAAAAAAAAAGTTAAAAAAATAATGTTATTTTAAAAAAAAAATTAACaaagaat > 1:297364/1‑136 (MQ=255) catcaACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAatat < 1:145587/151‑1 (MQ=255) atcaACAGCGTATAGAGGCGG‑TTATGTTAAAACACCC‑ATT‑T‑ACCT‑CAAAAAAAAA‑ACAAAAATT‑CCGA‑TTTA‑TTTCTTTACCCAATAAAAAAAAAAC‑TAAAAAAAAAAATGTTATTTTTAAAAAAAAAATAAAAAGCATTAAATTAAAAtt > 1:778273/1‑151 (MQ=255) atcaACAGCGTATAGAGGCGG‑TTATGTAAAAACAACC‑ATT‑ATCCCC‑CAAAAAAAAA‑AAAAAATTC‑C‑GA‑TTTT‑TTTA‑TTAAACAAAGAAAAAAAAAAATAAAAAAAAAAATGTTATTTTTAAAAAAAAAATAAAAAGAATTAATTTaa > 1:268626/1‑147 (MQ=255) caACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTaa < 1:606248/151‑1 (MQ=255) caACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTaa < 2:695847/151‑1 (MQ=255) caACAGCGTATAGAGGCGG‑TTATGTAAAAACACTC‑CCT‑A‑AACT‑CAAAAAAAAA‑ACAAAAATT‑CAGA‑TTTT‑TTTA‑TTAACCAAAAAAAAAAAAACCTAAAAAAAATAATGTTTTTTTTAAAAAAAAAATAAAAAACAATAATTTAata > 1:782817/1‑147 (MQ=255) aaCAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTaaa < 1:132153/151‑1 (MQ=255) ataGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAaataat < 1:45188/151‑1 (MQ=255) gg‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTaa > 2:76111/1‑150 (MQ=255) gTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTc < 1:233191/150‑1 (MQ=255) gTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCt < 2:525915/151‑1 (MQ=255) gTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCt < 2:637050/151‑1 (MQ=255) aaaaCCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCtt > 2:881237/1‑150 (MQ=255) aaCCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCTTAAc > 1:1060105/1‑151 (MQ=255) ccACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCTTAACg > 1:250306/1‑150 (MQ=255) | TTTACAAGGAATATTAACTACACTCGATGTCTTTAGAATAAAAGACAATACGAATCGCACTTTATCAATTTTCACTTAAAGTATGAACTGGATATCTTTATTCATAAGAACTATTCATCAACAGCGTATAGAGGCGG‑TTATGTAAAACCACTC‑ATT‑A‑GCCT‑CAAAACAAAG‑ACAAACTTC‑CAGA‑TTTA‑TTAC‑TTAACCAATGAATAACAAGCTTAAAAAATATACTGTTATTCTAAAGAAAAAATTAACAGGCATTAATTCAATATTAAAAAAATAATAGATTAAAATTTCTTAACG > NC_000913/2903545‑2903841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |