Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 3,812,792 | 0 | C | A | 45.7% | 96.8 / 51.3 | 81 | T21N (ACC→AAC) | dfp | fused 4'‑phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase, FMN‑binding |
Reads supporting (aligned to +/- strand): ref base C (15/29); new base A (37/0); total (52/29) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.90e-11 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.79e-01 |
AAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAG > NC_000913/3812645‑3812941 | aaaGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAcccc < 1:633504/151‑1 (MQ=255) aaaGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAcccc < 1:239165/151‑1 (MQ=255) tGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGa > 2:43320/1‑150 (MQ=255) aaTCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATTAAAACCCCGaa > 2:620380/1‑149 (MQ=255) ggTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGGGcg > 1:124858/1‑150 (MQ=255) tGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGATTGCTGCCTATAAAAACCCCGAACTGGTGc > 2:435130/1‑147 (MQ=255) gAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGcgtcgt < 1:116453/151‑1 (MQ=255) aaGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGTTGCCCCTAAAAACCCCGCAATGGGGCGTCGtt > 1:807237/1‑151 (MQ=255) aGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCATAAAAACCCTGAAATGGTGCGTCGttt > 2:536984/1‑151 (MQ=255) aCGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTgcgc < 1:784267/151‑1 (MQ=255) cGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTgcgc > 2:957530/1‑150 (MQ=255) gACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGGGCGGCGTTTGcgcg > 2:195873/1‑150 (MQ=255) caacaaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATc < 1:118809/151‑1 (MQ=255) caacaaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGTGCGGCGTTTGCGCGAt > 2:389551/1‑150 (MQ=255) aacaaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGGAATGGTGGGTCGTTTGCGCGa > 2:614116/1‑148 (MQ=255) caaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCCGAACTGGTGCGTCGTTTGCGCGATcgc > 1:536471/1‑150 (MQ=255) caaAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGTGCGGCGTTTGCGCGATcgc > 2:370512/1‑150 (MQ=255) aTTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGGCTTTAAAACCCCTTAACCTGTGGGGCGGTTTTGGGATCGCgggg > 1:692498/1‑147 (MQ=255) aTTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCg < 1:705935/150‑1 (MQ=255) tgtgATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGGTGCCTATAAAACCCCCGAACTGGTGCGTCGTTTGCGCGATCGCGGGGGCGa > 1:216122/1‑149 (MQ=255) tgtgATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGAc < 2:163183/150‑1 (MQ=255) tgATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTTTAAAAACCCCGAACTGGGGGGTCGTTTTGGCGATCGCGGGGGCGGCGTc > 1:816931/1‑151 (MQ=255) tgATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGGGCGGCGTTTGCGCGATCGCGGGGGCg > 2:447685/1‑146 (MQ=255) gATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGTTGCCTCTAAAAACCCTGAACTGGGGGGTCGTTTGCGCGATCGCGGGGGCGACGGcc > 1:478165/1‑151 (MQ=255) cGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCTATAAAAAACCTTAAATTGTGCGTCGCTTTCGCGCTCGCGGGGCCGACGGCCGCGTGGc > 1:804297/1‑150 (MQ=255) cGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGGCTATAAAAACCCCGAACTGGGGCGTCGGTTGCGCGATCGCGGGGGCGACGTCcgcg > 1:913593/1‑146 (MQ=255) gCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCTATAAAAACCCTGAAACGGTGGGTCGGTTGCGCGGTCGCGGGGGCGACGTCCGCGGAggcc > 2:46502/1‑148 (MQ=255) ccAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCAt < 1:458350/151‑1 (MQ=255) ccAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGATCTCGGCGTTAGCGGCGGTATTGCTGCCCATAAAAACCCTGAACTGGGGCGGCGGTTGCGCGATCGCGGGGGCCACGTCCGCGCAGcc > 2:779440/1‑149 (MQ=255) cAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATg > 2:210694/1‑151 (MQ=255) aaCTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGa < 2:1025731/151‑1 (MQ=255) aaCTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGCTTGCTACCTTTAAAAACCCCGAACACGGGCGGCGTTTGCGGGATCGCCGGGCCGACATCcgcccacacctg > 2:748002/1‑141 (MQ=255) aCTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGAc < 2:864969/151‑1 (MQ=255) cTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTTGTGCGTCGGTTTCGCGATCGCGGGGCCGACGTCCGCGGAGCCATGACCg > 1:768135/1‑149 (MQ=255) cTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGGATTGGTGCCTTTAAAACCCCCTCAATTTTGCGTCGGTTGCGCCAGTGGCGGGCCGACGACcgcggtaccagggc > 2:122996/1‑137 (MQ=255) tGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGTGCGTCGGTTGCGCGGTCGCGGGGCCGCCGTCCCCGGAGCCATGAcc > 1:363652/1‑147 (MQ=255) ggTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGGGCGTCGTTTGCGCGGTCGCGGGGGCGACGTCCGCGTAGCCATGACCGaa > 1:23916/1‑149 (MQ=255) gtgtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCg < 1:97184/151‑1 (MQ=255) tgtCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGGGCGTCGTTTTCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCgg > 2:29081/1‑151 (MQ=255) cACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCa < 1:272879/150‑1 (MQ=255) aCCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGGGCGGCGTTTGTGCGGTCGCGGGGGCGACGTCCCCGGAGCCAAGAcc > 2:826733/1‑140 (MQ=255) ccTGCAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAg < 2:112433/151‑1 (MQ=255) ccTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTGTTCCCATAAAAACCCTCAACTTGGGCGCCGGTTTCGCGGTCCCGGGGGCCACGTCCCCGCAGCCCTGACCGAAGGGGCcaaa > 2:258517/1‑150 (MQ=255) ccTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGGGCGGCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCaaaa > 2:689159/1‑150 (MQ=255) aGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCttt < 2:77626/151‑1 (MQ=255) aGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAAACCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGGCGACGTCCGCGTAGCCATGAACGCAGCGGCGAAAGCCttt > 1:1042007/1‑151 (MQ=255) aaaTCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGTGCGTCGTTTGGGCGATCGCGGGGCGGACGTCCGCGGAGCCATGACCGAAGCGGCAAAAGCCTTTTTCAc > 1:528462/1‑151 (MQ=255) catcatGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGGGCGTCGTTTTCGCGAGCGCGGGGGCGACGTCCGCGTAGCCATGACCGAAGCGGCCAAAACCTTTTTCAccccc > 2:321713/1‑150 (MQ=255) catGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACtt < 2:124912/151‑1 (MQ=255) catGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCGAACTGGTGGGTCGTTTGCGCGATCGCGGGGCCGGCGTCCGCCGAGCCATGACCGAAGCGGCCAAAGCCTTTATCAcccccc > 1:815905/1‑147 (MQ=255) atGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTCTGGCCCTAAAAACCCTGAACCGGGGCGTCGTTTGGGCGATCGCGGGGGCGGCGGCCGCGTAGCCATGACCGAAGCGGCCAAAACCTTTATTACCCCAcct > 1:927348/1‑148 (MQ=255) gAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAg < 1:298455/150‑1 (MQ=255) gCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCCATAAAAACCCCGAAATTGTGCGGCGTTTGCGCGGTCGCGGGGGCGGCGTCCCCCGAGCCCTGACCGAAGCGGCCAAAACCCTTTTCAcccccc > 1:558788/1‑142 (MQ=255) tGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTTTTGCCTGTAAAAACCCCGAACTAGTGCGTCGGTTGCGCGTTTGCGGGGGCGGCGTCCGCGTAGGCATGGCCGTAAGGGCCAAAGCCTTTATCCCCCCCCCTAGcct > 2:1019451/1‑146 (MQ=255) tGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCTAACTGGGGCGGCGTTTGCGCGGTCGCGGGGCCGACGGCCGCGCAGCCATGACCGGCGCGGCGAAAGCCTTTTTCACCCCCCCTAGCTTGc > 2:975725/1‑150 (MQ=255) ggCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTGTTTCTGCCTATAAAAAACCCGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCCTGGCCGAAGCGGCCAAAACCTTTTTCACCCCACTTAGCt > 1:734667/1‑146 (MQ=255) ggCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑Ag < 2:641635/151‑1 (MQ=255) ggCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑Ag < 2:187680/151‑1 (MQ=255) gCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑Agg > 2:882972/1‑151 (MQ=255) ggTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑gg < 2:741172/151‑1 (MQ=255) aaaaaaaTCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGtt < 1:478047/150‑1 (MQ=255) aaaaaaTCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAAACCCCCAACTGGTGGGGCGCTTTCGCGATCGCGGGGCCGACGCCCGCGGAGCCATGACCGAAGCGGCAAAAACCCTTTTCACCCCCCATAGCTTTC‑AGGG‑GGgtt > 2:519061/1‑150 (MQ=255) aaaaaTCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCt < 2:128166/151‑1 (MQ=255) tCGTTCTCGGCGTTAGCGGCGGTATTTCTGCCCCTAAAACCCCTGAACTGGTGGGGCATCTGGGCGATCGCGGGGCCGCCGTCCGCCTGGCCATGACCGCAGCGGGAAAAGCCTCTTTTACCCCACCTAGCTTCC‑AGGC‑gg > 1:618876/1‑141 (MQ=255) cGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTa < 1:254025/150‑1 (MQ=255) gTTCTCGGCGTTAGCGGCGGTATTGCTGGCTATAAAACCCCTGAACTGGTGCGGCGTTTTCGCGGTCGCGGGGGCCACGCCCGCGGAGCCCTGTCCGAAGCGGCCAAAACCCTTTTAACCCCCCTTAGCTTTCAAGGG‑GGTTTTTGtttt > 2:120202/1‑149 (MQ=255) ttCTCGGCGTTAGCGGCGGTATTGCTGCCCATAAAAACCCCGAACTGGTGCGGCGTTTTCGCGATCGCGGGGGCGACGTCCGCGTAGGCATGACCGAAGCGGCAAAAGCCTTTTTCACCCCACCTAGCTTGC‑AGGC‑GGgtttttg > 2:646089/1‑141 (MQ=255) ctcGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCCGAACTGGGGCGTCGTTTTCGCGATCGCGGGGCCGACGGCCGCGGAGCCATGACCGAAGCGGCAAAAGCCTTTTTCACCCCCCTTAGCTTGC‑AGGCGGGTTTTTGGTTTTcc > 2:784961/1‑150 (MQ=255) ggCGTTAGCGGCGGTATTTGTGCCCCTAAAACCCCCTAAATGGTGCGGCGTTTGGGCGGTCGCGGGGGCGACGTCCGCGTAGCCATGACCGAAGAGGCCAAAGCCTTTTTCACCCCCCCTAGCTTGC‑CGGCGGGTTTTTGGTTTTCCGGtt > 1:725266/1‑151 (MQ=255) ggCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGttt < 2:195786/151‑1 (MQ=255) gCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTc < 1:657994/151‑1 (MQ=255) aGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACa < 1:46497/151‑1 (MQ=255) gcggTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTct < 2:662871/151‑1 (MQ=255) gcggTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTct < 2:258499/151‑1 (MQ=255) ggTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTctgc > 2:343315/1‑151 (MQ=255) tgctgcCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGa > 1:9474/1‑150 (MQ=255) gcCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCg < 1:43316/150‑1 (MQ=255) ccTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCgg > 1:823259/1‑150 (MQ=255) ataAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCa < 2:817065/149‑1 (MQ=255) ataAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAg > 2:41471/1‑150 (MQ=255) aaaCCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGGTATCCCGTTTCCGACAGTCTGCTGGACCCGGc > 1:1032280/1‑145 (MQ=255) aaCCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGaa < 2:768263/151‑1 (MQ=255) aCCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAg < 2:674034/151‑1 (MQ=255) | AAAGTGAATCTCAGGTGAAGGCACGACAACAAAAGTATTGTGATAAAATCGCCAACTTCTGGTGTCACCCTACAGGAAAAATCATCATGAGCCTGGCCGGTAAAAAAATCGTTCTCGGCGTTAGCGGCGGTATTGCTGCCTATAAAACCCCTGAACTGGTGCGTCGTTTGCGCGATCGCGGGGCCGACGTCCGCGTAGCCATGACCGAAGCGGCAAAAGCCTTTATCACCCCACTTAGCTTGC‑AGGC‑GGTTTCTGGTTATCCCGTTTCCGACAGTCTGCTGGACCCGGCAGCCGAAG > NC_000913/3812645‑3812941 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |