Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 4,538,109 | 0 | A | C | 43.1% | 115.9 / 24.6 | 72 | G219G (GGT→GGG) | nanM | N‑acetylneuraminic acid mutarotase |
Reads supporting (aligned to +/- strand): ref base A (34/7); new base C (0/31); total (34/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.46e-14 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537964‑4538258 | ccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCttt > 2:418509/1‑151 (MQ=255) ccGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCttt < 1:392161/151‑1 (MQ=255) gCAAAACCGCCAGCTACGCCATCTGGTGATGAGCCGGGAGCAAGCTTATTCCATTTT‑AAATTATTCCCGGTGAAATCAAGTTC‑AAA‑TACCGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTa < 1:283478/150‑1 (MQ=255) aaCCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑cac > 1:450093/1‑151 (MQ=255) cAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAAccgc < 2:144450/151‑1 (MQ=255) tACGCCATCTGGCGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACcgccgc > 1:690481/1‑150 (MQ=255) aCGCCATCGGGTGATGAGACGGGAGCAAGCTTATTCCTTTTA‑AAATTATTCCCGGTAAAATCAAGTTA‑AAA‑TCCGGCATCCTTTCGCAACCCTGG‑TTG‑GGCTTCGCCATTAATAAGCCGGGTTTTACCCCCTTAATT‑CACAACcgccgc < 1:795061/149‑1 (MQ=255) cATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGc > 2:450414/1‑151 (MQ=255) cATCTGGTGAGGAGAGGGGAGCAAGTTTTTTCCTTTTT‑AAATTATTACCGGTAAAATCAAGTCA‑AAA‑TCGGCCATCCGTCCGCAATCCTGT‑TTT‑GGCTTCGCCATAAATAAGCCGGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGc < 1:850797/151‑1 (MQ=255) cTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGt > 1:77672/1‑151 (MQ=255) gaCGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTAcc > 1:672866/1‑149 (MQ=255) gggAGCAATCTTTTTCCATTTA‑AAATTATTCCGGGTAAAATCAATTTA‑AAA‑TACGGCCTCCGTCCCCATCCCGGG‑TTG‑GCCTCCGCCATAAAAAACCCAGTTTTTACCCCTTTTATA‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGc < 1:184581/151‑1 (MQ=255) gggAGCAAGTTTTTTCCTTTTT‑AAATTATTCCCGGTAAAATCAAGTTC‑AAA‑TACGCCATCCTTCCGCAATCCTGT‑TTT‑GGTTTCCCCATAAATAAGCCAGTTTTTATCCCTTTTATT‑CAAAACCGCCGCACCAGCCGTTCCGTACCAg < 2:153225/148‑1 (MQ=255) gggAGCAACCTT‑TTCCTTTTTAAAATTATT‑CCGGGAAAAACAAATTCAAAA‑TCCGGCACCCTTTCAC‑ATCCTGG‑TTTGGGCTTCCCCATTAAAACGCCAGTTTTTACCCCTTTTATT‑CAAACCCGCCGCACCAGCCGTTCCGTACCAGGGc < 1:460567/151‑1 (MQ=255) ggAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCg > 1:1034495/1‑151 (MQ=255) aaGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg > 1:442717/1‑151 (MQ=255) aaGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg > 2:473945/1‑151 (MQ=255) aaGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCg > 1:825965/1‑151 (MQ=255) aGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGc > 2:340503/1‑151 (MQ=255) gCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGcc > 2:1055763/1‑151 (MQ=255) agtttttCCAATTT‑AAATTTTTACCGGTGAAAATAAATTA‑AAA‑AGCCGCCCCCCTTCCGAAACCTGG‑TTTGGGCTTCCCCTTAAATAA‑CCAGGTTTTAACCCCTTTTTTCCAAACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGc < 1:824862/146‑1 (MQ=255) ttt‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc > 1:285024/1‑151 (MQ=255) tt‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc > 2:242383/1‑150 (MQ=255) taaaaTTATTCCCGGTAAAAACAAGTAA‑AAA‑TAGGGCCCCCGTCCCAATTCCTGT‑TTT‑GTCTCCGCAATAAAAACCCCGGTTTTTACCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTcc < 2:606314/148‑1 (MQ=255) aaaTTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCAtt > 2:211806/1‑151 (MQ=255) ttattaCCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCt > 1:923652/1‑151 (MQ=255) attaCCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt > 1:1029614/1‑151 (MQ=255) ttcccGGTAAAATCAATTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGT‑TTT‑GCCTTCGCCATTAATAAGCCAGGTTTTACCCCCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgt < 2:813790/147‑1 (MQ=255) cgggTAAAATCAAGTAC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCCCCATTAATAAGCCGGTTTTTATCCCTTTTATC‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCtgtg < 2:676068/146‑1 (MQ=255) ccGGTAAAATCAATTTA‑AAA‑TCCGGCACCCGTTCGCAACCCTGT‑TTT‑GGTTTCGCCATTAAAAAGCCAGTTTTTATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTg < 2:843130/151‑1 (MQ=255) ggtaaaacaaatttaaaa‑TCCGGCCCCCGTTCGCAATCCTGG‑TTG‑GGTTTCGCCTTTAATAAGCCAGTTTTTATCCCCTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGa < 1:279757/135‑1 (MQ=255) ggtaaaaCAAATTC‑AAATTCCGCCATCCTTTCGCAATCCTGT‑TTT‑GTTTTCCCCATAAAAACGCGGGTTTTTATCCCCTTTTTT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGa < 2:349200/147‑1 (MQ=255) tGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAggg > 1:573692/1‑151 (MQ=255) attCAATTTA‑AAA‑TCCGGCATCCTTTCGCAATCCTGG‑TTT‑GGCTCCCCCATTAATAACCCAGTTTTTACCCCCTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATc < 1:750738/149‑1 (MQ=255) cAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 1:387423/1‑150 (MQ=255) cAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 1:445081/1‑150 (MQ=255) cAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaa > 1:39890/1‑150 (MQ=255) aaGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 2:831900/1‑150 (MQ=255) aaGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCaaa > 2:384999/1‑150 (MQ=255) aatttaaaa‑TCCGGCTTCCGTTCGCACTCCTGT‑TTT‑GGCTCCGCCATTAAAAAGCCAGTTTTTATCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCa < 1:450326/142‑1 (MQ=255) aatttaaaa‑TCCGCCATCCTTTCGAAATCCTGT‑TTT‑GGTTTCCCTATTAATAGGCCAGTTTTTACCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCa < 2:688442/142‑1 (MQ=255) ttC‑AAA‑TACGGCATCGTTTCGAAATCCGGT‑TTG‑GGCTTCCCCATTAATAGGCCAGTTTTTACCCCTTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGa < 2:61861/150‑1 (MQ=255) aaa‑TCCGCCTTCCTTTCCCAACCCTGT‑TTT‑GGCTTCCCCTTTAATAACCCAGTTTTTATCCCCTTTTTC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGac < 2:149117/148‑1 (MQ=255) aaa‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaac > 1:1763/1‑151 (MQ=255) a‑TACGCCATCCTTCCGCAACCCTGT‑TTT‑GGTTCCGCTTTTAAAAACCAAGTTTTTACCACTTTTATT‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGacaaca < 2:144180/150‑1 (MQ=255) gcctccttttCCCAATCCTGG‑TTG‑GGCTCCCCCTTTAAAAAACCCGGTTTAATCCCTTTTATC‑CCAAGCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGa < 1:297411/140‑1 (MQ=255) gccATCCTTTCCCATTCCTGT‑TTT‑GGCTTCCCAATAAATAGGCCGGTTTTTATCCCTTTTATC‑AAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGaaa < 1:142687/148‑1 (MQ=255) acccGTTCCCATTCCTGT‑TTT‑GCCTTCGCATTAAATAAGCCGGGTTTTACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACt < 2:118953/147‑1 (MQ=255) aTCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt > 2:811126/1‑150 (MQ=255) cctttCGCAATCCTGG‑TTT‑GGCTTCCCCATAAAAAAGCCGGTTTTTACCCCTTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACtt < 2:672981/145‑1 (MQ=255) ccGTCCGCAATCCTGG‑TTT‑GGTTCCCCCATTAAAAACCCGGGTTTTACCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTa < 2:366740/149‑1 (MQ=255) ttCGCAATCCTGG‑TTG‑GGCTTCCCCATTAAAAAGCCAGTTTTTACCCCTTTTATC‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTAtt < 2:20761/148‑1 (MQ=255) ttCGCAA‑CCTGGTTTT‑GGTTTCGCCATAAATAAGCCAGGTTTTATCCCCTTTATT‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga < 2:982355/150‑1 (MQ=255) tcccaaaTCCTGT‑TTT‑GGCTCCCCCATAAATAAGCCAGGTTTTATCACTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAg < 1:328433/134‑1 (MQ=255) tCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTga > 1:287453/1‑149 (MQ=255) cAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTgaagaa > 2:710806/1‑150 (MQ=255) tGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCAATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtct > 1:853119/1‑151 (MQ=255) gg‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtctt > 1:3136/1‑151 (MQ=255) ttt‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAAtcttct > 2:712490/1‑151 (MQ=255) tt‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTg > 2:66753/1‑151 (MQ=255) cTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCttt > 2:1056409/1‑151 (MQ=255) ttCGCCATAAAAAACCCGGTTTTTATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGc < 2:1024751/147‑1 (MQ=255) cGCCATTAATAAGCCGGGTTTTATCCCCTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCttttt < 2:1012575/150‑1 (MQ=255) ttAAAAACCCAGTTTTTATCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTc < 2:880906/149‑1 (MQ=255) aaaaacccggtttttACCCCTTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGt < 1:897822/135‑1 (MQ=255) ataaGCCGGTTTTTACCCCTTTTATC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAAt < 2:754722/151‑1 (MQ=255) ccAGTTTTTACCCCCTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGt < 1:1055588/149‑1 (MQ=255) aGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGc > 1:801703/1‑151 (MQ=255) gttttaATCCCTTTAATC‑CAAAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCa < 1:537917/149‑1 (MQ=255) tttaATCCCCTTTTTC‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGa < 1:1052729/146‑1 (MQ=255) cACTTTTATC‑CACACCCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAttt < 2:578134/150‑1 (MQ=255) cACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGAtttt > 2:909162/1‑151 (MQ=255) | CCGCAAAACCGCCAGCTACGCCATCTGGTGATGAGACGGGAGCAAGCTTATTCCATTTT‑AAATTATTACCGGTGAAATCAAGTTC‑AAA‑TACGGCATCCGTTCGCAATCCTGG‑TTT‑GGCTTCGCCATTAATAAGCCAGGTTTTATCACCTTTATT‑CACAACCGCCGCACCAGCCGTTCCGTACCAGGGCGATTCGCCAGCGTAACTCCATTGCTGTGTTGAGGGATCAAAAGACAACAGAAACTTATTGAAGAAATAATCTTCTGCTTTTTTGTCAAAATAGTGAGCATTGATTTT > NC_000913/4537964‑4538258 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |