Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,779,384	A→G	S111G (AGC→GGC)	lldR →	dual role activator/repressor for lldPRD operon

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,779,384	0	A	G	100.0%	238.0 / NA	61	S111G (AGC→GGC)	lldR	dual role activator/repressor for lldPRD operon
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (27/34);  total (27/34)

CAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATA  >  NC_000913/3779239‑3779531                                                                                                                                                  |                                                                                                                                                    cAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCAcc                                                                                                                                                <  1:509054/151‑1 (MQ=255) cAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCAcc                                                                                                                                                <  2:1014733/151‑1 (MQ=255)  aGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCg                                                                                                                                               <  2:3201/151‑1 (MQ=255)     cGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCgcat                                                                                                                                            >  1:550045/1‑151 (MQ=255)      gACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCgcatg                                                                                                                                           >  1:624819/1‑151 (MQ=255)           ggcggcggGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCgcatggcatg                                                                                                                                      >  2:213235/1‑151 (MQ=255)              ggcggGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCgg                                                                                                                                   >  2:735053/1‑151 (MQ=255)               gcggGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGc                                                                                                                                  <  1:988168/151‑1 (MQ=255)                   gACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATg                                                                                                                              <  1:594976/151‑1 (MQ=255)                     cGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATgcg                                                                                                                            >  2:1025715/1‑151 (MQ=255)                       tttATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATgcgcg                                                                                                                          >  1:300950/1‑151 (MQ=255)                       tttATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATgcg                                                                                                                            <  2:384199/149‑1 (MQ=255)                             cGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCcaca                                                                                                                     <  2:425508/150‑1 (MQ=255)                              gCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACAcc                                                                                                                   <  2:416442/151‑1 (MQ=255)                                tGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTg                                                                                                                 >  1:586741/1‑151 (MQ=255)                                 ggCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCt                                                                                                                  <  1:766672/149‑1 (MQ=255)                                 ggCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTgg                                                                                                                <  1:1064916/151‑1 (MQ=255)                                   cGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCg                                                                                                              <  1:1025957/151‑1 (MQ=255)                                    gTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCg                                                                                                              >  2:242682/1‑150 (MQ=255)                                     tCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGAc                                                                                                            >  2:580164/1‑151 (MQ=255)                                         gACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACaa                                                                                                          >  1:608732/1‑149 (MQ=255)                                             caTGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACaaagaaa                                                                                                     >  2:215377/1‑150 (MQ=255)                                              aTGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACaaagaaaa                                                                                                    <  1:349825/150‑1 (MQ=255)                                                        cAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAgcttt                                                                                         <  2:422035/151‑1 (MQ=255)                                                        cAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAgctt                                                                                          <  1:949792/150‑1 (MQ=255)                                                           aaCATCGCCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAgctttgct                                                                                      <  1:114330/151‑1 (MQ=255)                                                                   ccAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGc                                                                               >  1:990945/1‑150 (MQ=255)                                                                   ccAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGc                                                                               >  1:810015/1‑150 (MQ=255)                                                                   ccAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCa                                                                              <  1:399248/151‑1 (MQ=255)                                                                      gCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACg                                                                           <  2:811879/151‑1 (MQ=255)                                                                            aaaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGt                                                                     <  1:369983/151‑1 (MQ=255)                                                                            aaaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGt                                                                     >  2:1055418/1‑151 (MQ=255)                                                                            aaaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGt                                                                     >  1:402644/1‑151 (MQ=255)                                                                             aaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTg                                                                    <  1:858051/151‑1 (MQ=255)                                                                             aaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTg                                                                    <  2:488819/151‑1 (MQ=255)                                                                             aaaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTg                                                                    <  1:90671/151‑1 (MQ=255)                                                                              aaaCACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGa                                                                   <  1:826719/151‑1 (MQ=255)                                                                                acacTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAg                                                                 <  1:814400/151‑1 (MQ=255)                                                                                   cTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGAcc                                                              >  2:773507/1‑151 (MQ=255)                                                                                     gATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCg                                                            <  1:590202/151‑1 (MQ=255)                                                                                      aTGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCgg                                                           <  1:332826/151‑1 (MQ=255)                                                                                        ggCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGat                                                         <  2:367234/151‑1 (MQ=255)                                                                                           cGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATc                                                      >  2:7826/1‑151 (MQ=255)                                                                                            gatgatCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCg                                                     <  1:123876/151‑1 (MQ=255)                                                                                                atCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTc                                                 >  2:76418/1‑151 (MQ=255)                                                                                                  ccGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTca                                                <  2:728326/150‑1 (MQ=255)                                                                                                     gATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAg                                            <  1:923685/151‑1 (MQ=255)                                                                                                      aTTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGc                                           >  2:651397/1‑151 (MQ=255)                                                                                                           aGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcg                                      <  1:494523/151‑1 (MQ=255)                                                                                                            gTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgt                                     >  2:972434/1‑151 (MQ=255)                                                                                                            gTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgt                                     >  2:913163/1‑151 (MQ=255)                                                                                                             tttCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgtt                                    >  2:124972/1‑151 (MQ=255)                                                                                                               tCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgttc                                   <  1:142739/150‑1 (MQ=255)                                                                                                                cGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgttcgt                                 >  1:958001/1‑151 (MQ=255)                                                                                                                cGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgttcgt                                 <  2:1019893/151‑1 (MQ=255)                                                                                                                cGATATTCTGGAAGCCCGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGAcgttcgt                                 <  1:2475/151‑1 (MQ=255)                                                                                                                                cGCTACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTg                 >  2:995542/1‑151 (MQ=255)                                                                                                                                   tACGCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCg              >  1:96143/1‑151 (MQ=255)                                                                                                                                      gCCATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGa             >  2:424749/1‑149 (MQ=255)                                                                                                                                        cATTGAAGCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGcc         >  1:728961/1‑151 (MQ=255)                                                                                                                                               gCCGGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATa  <  1:263175/151‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                    CAGTCGACGCGGCGGCGGGACGTTTATTCGCTGGCGTCATGACACATGGTCGGAGCAAAACATCGTCCAGCCGCTAAAAACACTGATGGCCGATGATCCGGATTACAGTTTCGATATTCTGGAAGCCCGCTACGCCATTGAAGCCAGCACCGCATGGCATGCGGCAATGCGCGCCACACCTGGCGACAAAGAAAAGATTCAGCTTTGCTTTGAAGCAACGCTAAGTGAAGACCCGGATATCGCCTCACAAGCGGACGTTCGTTTTCATCTGGCGATTGCCGAAGCCTCACATA  >  NC_000913/3779239‑3779531

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑