| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,222,233 | 0 | G | A | 39.0% | 116.9 / 41.8 | 82 | pseudogene (60/75 nt) | ycgH | pseudogene; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base G (42/8); new base A (0/32); total (42/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.29e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222084‑1222382 | tgtgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑g > 1:364729/1‑150 (MQ=255)tgtgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑g < 1:119522/150‑1 (MQ=255) gtgAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑Ga > 1:599503/1‑150 (MQ=255) aaGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAatat < 2:1162032/151‑1 (MQ=255) ggcGAACAAGATGGAGCGAGTAAGTTTGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCACCGTATGGGGAATGTGGGCATGCAGCTAGGAGATAAAGGCAACATTGTCA‑CCGCAGTGATGGTGGGCCT‑GAAATATaa < 2:1122117/149‑1 (MQ=255) gAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGtt > 1:17584/1‑151 (MQ=255) aaCAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTc < 1:683764/151‑1 (MQ=255) aCAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCt < 1:287968/151‑1 (MQ=255) cAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTg > 1:9696/1‑151 (MQ=255) aaGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTg > 2:203035/1‑150 (MQ=255) aGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGa > 2:1464644/1‑150 (MQ=255) aTGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGGGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATcc > 1:1458688/1‑151 (MQ=255) ggggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATccc < 1:402440/150‑1 (MQ=255) gggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCccgc > 1:138716/1‑151 (MQ=255) ggCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCccgcc < 1:952759/151‑1 (MQ=255) gAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGtt > 1:1174915/1‑151 (MQ=255) aGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGtt > 2:356287/1‑150 (MQ=255) ttGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTaa > 2:537908/1‑150 (MQ=255) ggggaAAATTAAACTTGGCGAAAATGGCAACCTGAATCCGGCGGCCAGCGTCGGGGGAATGTGGGCGTGCAGCTGGTTAATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑AAAATATAAGTTCGGATCCCGCCGTTAGCTaaa < 1:520328/149‑1 (MQ=255) gAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTTTGGGGAATGTGGGCGCGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACcg > 2:175368/1‑151 (MQ=255) aaaTAAAACTGGGCGAAAGGGGCACCCTGAACCCAGGGGCCAGCGTCGGGGGAAGGTGGGGGTGCAGCGGGGGGATAAGGGCTACAAGGACC‑CCGAAGTGATGGGGGGCCT‑AAAATATAAGTTTTGATCCCGCCGTTAGCTAAAAAACcg < 1:910994/150‑1 (MQ=255) aaTAAAACTGGGCGAAAAGGCAAACCTAAACCCAGCGGCCAGCGTGGGGGGATTGGGGGGGGGCGGCTGGTTAATAAGGGCTAAAATGCCC‑CCGCAGTGAGGGTGGGCGT‑AAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACcgcg < 2:88079/151‑1 (MQ=255) aaaCTTGGGGAAAATGGCCCCCGGAACCCAGGGGCCGGCGTCGGGGGAATGGGGGGGTGAGGCGGGGTAAAAATGGCTACAAGGCCC‑CCGTGGTGAGGGGGGCCAT‑GAAATATAATTTCTTTCCCCGCCGTTAGCTAAAAAACCGcgtcg < 2:271212/150‑1 (MQ=255) aaaCTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtcg > 2:91963/1‑150 (MQ=255) aaaCTGCGCGAAAAGGGCACCCTGATCCCGGCGGCCGGCGTGTGGGGAAGGGGGGGGGGCAGGTGGGTGAAAAGGCCTAAAATGACC‑CGGCAGGGTTGGTGGCCTT‑AAAATATAATTTCTGTTCCCGCCGTTAGCTAAAAAACCGcgtcgt < 1:1074878/151‑1 (MQ=255) aaCTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGcgtcgt > 1:613913/1‑150 (MQ=255) tGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTc > 2:678739/1‑150 (MQ=255) ggCGAAAAGGGCACCCGGAACCCGGCGGCCAGCGTCGGGGGAAGGTGGGCGTGAAGTTGGGTGATAATGGCTACAAGGACA‑CCGCAGTGAGGGTGGGCCT‑GAAATATAAGTTCTGCTCCCGCCGTTAGCTAAAAAACCGCGTCGTAt < 1:48361/147‑1 (MQ=255) gCGTAAAGGGCACCCTGAACCCAGCGGCCAGCGTCGGGGGATTGGGGGCGTGCAGCGGGGTAATAATGGCTAAAATGACA‑CCGCAGTGATGGTGGGCTT‑AAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATc < 1:407378/151‑1 (MQ=255) cGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg > 1:721248/1‑151 (MQ=255) gTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg > 1:1407108/1‑150 (MQ=255) aaaggccacccTAAACCCGGCGCCCAGCGTCTGGGGAATGTGGGGGTGAAGGTGGGTAATAATGTCTACAATGACA‑CCGCAGTGATGGGGGGCCG‑AAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAc < 1:139550/141‑1 (MQ=255) aaaTGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcg > 1:645344/1‑151 (MQ=255) aaaGGGCAACCTAAATCCAGCGGCCAGCGTGGGGGGAGGGGGGGGGGGCAGGGGGGTGATAAGGGCTAAAAGACCC‑CCGGAGTGGGGGGGGGCAG‑AAAATATAAGTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCg < 2:910651/148‑1 (MQ=255) aaTGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGAcgc > 2:303165/1‑151 (MQ=255) gggCAACCTGAACCCGGCGGCCAGCGTCGGGGGAATGTGGGGGGGCAGGGGGGTGATAGGGGCTACAAGGCCC‑CCGCAGTGATGGTGGGCTT‑AAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCgg < 2:608596/150‑1 (MQ=255) gCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGt > 1:693574/1‑150 (MQ=255) acccTGACTCCGGCGGCCGGCGTCGGGGAAATGGGGGCGGGCAGCTGGGTAAAAATGGCTAAAATGACC‑CCGCAGTGAGGGTGGGCCT‑AAAATAAAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACa < 1:777786/149‑1 (MQ=255) acccTAAACCCAGCGGCCAGCGTCGGGGAAAGGTGGGCGGGCAGGTGGGTAATAAGGGCTACAATGCCC‑CCGCAGTGAGGGGGGCCCT‑AAAATAAAAGTTCGGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTAc < 1:533128/148‑1 (MQ=255) cctaacgccAGCGGCCGGGTTGGGGGGAAGGTGGGCGTGCATATGGGTAATAATGGCTACAGTGCCC‑CCGATGTGAGGGGGGCCAT‑AAAAAATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACa < 2:168125/142‑1 (MQ=255) ccTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACat > 1:439503/1‑150 (MQ=255) gAACCCGGCGGCCGGCGTCGGGGGAAGGGGGGCGTGCAGCTGGGTAATAATGGCTACAATGACC‑CCGCAGTGGTGGTGGGCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACatat < 1:417248/149‑1 (MQ=255) tCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAat > 1:866871/1‑151 (MQ=255) ccggCGGCCGGCGTCGGGGGAAGGGGGGGGTGAGGGTGGGTGATAATGGCTACAATGACC‑CCGCGGTGGGGGTGGGCAT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAat < 1:358067/147‑1 (MQ=255) ccAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAat > 1:778238/1‑150 (MQ=255) aGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt > 1:323744/1‑151 (MQ=255) gCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt > 2:916637/1‑150 (MQ=255) cgcacgtcGTCGGGGGAGTGTGGGGGTGCGGCGGGGGAAAAGTGGATAAAAGGACC‑CCGCGGGAAGGGTGGGACT‑AAAAAAAATGTTCTGAGCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAata < 2:1431901/140‑1 (MQ=255) ggCCAGCGTCGGGGGAAGGTGGGCGTGCGGCGGGGTGATAATGGCTAAAATGACC‑CCGCAGTGATGGTGGCCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAAtatt < 1:438032/148‑1 (MQ=255) ccggCGTCGGGGGAATGTGGGGGTGCGGTGGGGTAATAATGCCAACAATACCC‑CCGATGGGATGG‑GGGCCTAAAAATATAATTTCTAATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATattattc < 2:1101090/147‑2 (MQ=255) gtttGGGTAGTGTGGGGGTGCGGCGGGGTAATAGTGGCTAAAATGACC‑CCGCAGTGTTGGTGGGCCT‑AAAATAAAGTTTCTGTACCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAttt < 1:4706/142‑1 (MQ=255) gTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGcc > 1:643840/1‑151 (MQ=255) gTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGcc > 2:537554/1‑151 (MQ=255) ttggggaaagggggggGTGCAGTGGGGTAATAATGGCTACAAGAACC‑CCGCAGGGAGGGGGGCCAT‑AAAATATAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGcc < 2:1222790/138‑1 (MQ=255) tcgggggATTGGGGGCGGGCAGCGGGGTGATAATGGCTACAAGAACC‑CCGCAGTGATGGTGGGCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTAtttttt < 1:160076/144‑1 (MQ=255) tcgggggAATGTGGGCGTGGAGCTGGTTGAAAATTCAAAAAAGGCCC‑CCGCAGTGAGGGTGGGCTT‑AAAAAATAATTTCTAATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGc < 1:115300/146‑1 (MQ=255) ggggAATGGGGGCGTGCAGCGGGGTGATAATGGCTAAAATGACC‑CCGCAGTGATGGTGGGCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATa < 1:642203/151‑1 (MQ=255) gAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGc > 1:318740/1‑150 (MQ=255) gCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGtc > 1:567708/1‑150 (MQ=255) aGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCAATAGCACGCATGGTGtcatc > 2:1408010/1‑151 (MQ=255) gttGGGTGATAATGGCTAAAATGACC‑CCGCGGTGATGGTGGGCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGgtg < 1:535625/143‑1 (MQ=255) ggttGATAAGGGCTAC‑ATTACACCCGCAGGGGTGGTGTGGCT‑AAAATATAATTTCGGTCACCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAt < 2:537219/147‑1 (MQ=255) gggTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAAtt > 2:1127166/1‑151 (MQ=255) gTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGc > 1:390591/1‑151 (MQ=255) aTAATGGTTAAAATGACC‑CCGCGGTGAGGGTGGGCCT‑AAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGc < 1:962444/148‑1 (MQ=255) aaTGGCTACAATGCCA‑CCGAAGTGAGGGTGGGCCT‑AAAATAAAATTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGa < 1:1399972/151‑1 (MQ=255) ggCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATc > 2:1350132/1‑150 (MQ=255) cAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGc > 2:553790/1‑151 (MQ=255) aaTGACA‑CCGGAGTGGGGGTGGGCTT‑AAAATATAAGTTCTGAGCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGc < 1:642631/150‑1 (MQ=255) aTGACA‑CCGCAGTGATGGGGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATATCACGCATGGTGTCATCAATTGCCGTGATCAACAGCAt > 2:93172/1‑151 (MQ=255) ca‑cCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGc > 2:1068934/1‑151 (MQ=255) ccGGAGTGATGGTGGCCCT‑AAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTg < 1:158821/148‑1 (MQ=255) cGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCggg > 1:371448/1‑151 (MQ=255) gaaGTGAGGGAGGGCCA‑AAAATATAATTTGTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGt < 1:1138365/149‑1 (MQ=255) gCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGt > 1:1075794/1‑151 (MQ=255) tGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCttt > 1:441754/1‑151 (MQ=255) gATGGTGGGCAT‑AAAAAAAAATTTCTAATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGc < 1:185085/142‑1 (MQ=255) ggtggGCCT‑AAAATATAATTTCGGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCtt < 2:230703/146‑1 (MQ=255) ggggggCCT‑AAAATATAATTTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAg < 1:1434743/146‑1 (MQ=255) gggCTT‑AAAATATAAATTCTGACCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTa < 1:1362287/145‑1 (MQ=255) gggCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCa > 2:952018/1‑150 (MQ=255) gCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAAc > 2:193269/1‑151 (MQ=255) cT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCt > 2:233283/1‑151 (MQ=255) t‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTg > 2:1376751/1‑151 (MQ=255) | TGTGAAAGTCGAACAAGATGGGGCGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGTCTGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACA‑CCGCAGTGATGGTGGGCCT‑GAAATATAAGTTCTGATCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCATGGTGTCATCAATTGCCGTGATCAACAGCATTTGCGGGTCTTTAGCGCAAACCTG > NC_000913/1222084‑1222382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |