Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,621,118 | 0 | A | C | 40.7% | 161.1 / 25.2 | 91 | V7G (GTG→GGG) | eamA | cysteine and O‑acetyl‑L‑serine efflux system |
Reads supporting (aligned to +/- strand): ref base A (45/9); new base C (0/37); total (45/46) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.10e-17 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGAT > NC_000913/1620975‑1621265 | tCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATc > 2:1083314/1‑151 (MQ=255) cGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCAtat < 2:751439/151‑3 (MQ=255) cGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTc > 2:495876/1‑151 (MQ=255) gTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTcg < 1:633269/151‑1 (MQ=255) gCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTcgcg < 1:1315975/151‑1 (MQ=255) aaaaaaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACAtt < 1:229592/151‑1 (MQ=255) aGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTAcc > 2:1363320/1‑151 (MQ=255) gATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTAcc > 2:206702/1‑150 (MQ=255) aTAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGc < 1:937266/151‑1 (MQ=255) tAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGcc > 1:931758/1‑151 (MQ=255) cGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTg > 1:64150/1‑151 (MQ=255) gAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGa > 1:759046/1‑150 (MQ=255) aaaaGCGACCAGCATAAAGCGCAACCCGGCCAGCATCAGCGGTGGCATGTTATAAAGCCCCCCTTTGATGCCCACAAAATTAACCCCCCATCCGACCACTCCCAGTAGCCCCACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAAt < 1:1146946/151‑1 (MQ=255) aaaGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAAtt > 1:658885/1‑151 (MQ=255) cGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCAt > 1:530702/1‑151 (MQ=255) gACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATc > 1:496932/1‑151 (MQ=255) aCCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCt > 2:1059772/1‑151 (MQ=255) aCCAGAATAAAGCGCAAACCGGCCAGCACCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGCCCACTACCATTAGCCCCACCCCCCCATTTTTCCGCGACATTCTACCGCCTCTGAATTTCATc < 1:760149/150‑1 (MQ=255) ccAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCtt > 1:1037055/1‑151 (MQ=255) cAGCAAAAAGCGAAACCCGGCCAGCATGAGCGGTGGCATTTTATGAAGCCCCTTTTTGATGACCACAAAATTTGCCCCCCATACGCCCCCTCCAAGTAGCCCCAACCCCCCATCTTTTCGCGACTTTCTACCGCCTCTGAATTTc < 2:926028/145‑1 (MQ=255) aaaaaGCCAAACCCGGCCAGCATCAGCGGTGGCATGTTATGAACCCCCACTTTGATGCCCAAAAAATTTAGCCCCCAACCGCCCCCTCCCAGTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCtt < 2:796987/144‑1 (MQ=255) aTAAAGCGCAACCCGCCCAGCATCAGCGGTGGCATGTTATGAAGCCCCCCTTTGATGACCAAAAAATTTACCCCCCATACGCCCACTACCAGTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTa < 1:1029844/151‑1 (MQ=255) aTAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAACCCCCATTTTGATAACCACAAATTTTACCCCCCACCCTCCCACTCCCAGTAGCGCCAACCCCCCATTTTTTCGCGAAATTCTACCGCCTCTGAATTTCATCtttt < 1:181674/148‑1 (MQ=255) aaaGCGCAACCCGGCCAGCATCAGCGGTGGCATGTTATGAACCCCCACTTTGATAACCACAAAATTTAGCCCCCATCCGCCCACTACCAGTAGCCCCACCCCCCCATTTTTTCGCGAAATTCTACCGCCTCTGAATTTCATCTTTTGTaa < 1:464332/150‑1 (MQ=255) aaaGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTa > 2:130889/1‑149 (MQ=255) aaGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGc > 1:569743/1‑151 (MQ=255) gcaccccGCCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCAAAAAATTTACCCCCCTTACCCCCACTACCAGAAGCGCCAACACCCCATTTTTGCCCGAAATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCa < 2:548781/143‑1 (MQ=255) aacccGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCAAAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCaa < 1:138436/148‑1 (MQ=255) aaaCGGCCCCGCATGAGTGGTGGAATCTTAGGAAGCCCATTTTTGAGAACCAAAAATTTTTGCCCCCATACGACCCCCCCAATTAGCGCAAGCACCCCACCTTTTCGGGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCa < 1:1298345/150‑1 (MQ=255) aaaCCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCa > 2:1061245/1‑150 (MQ=255) aaaCCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCa > 2:826024/1‑150 (MQ=255) aaaCCGGCCAGCATCAGCGGTGGCATGATAAGAAGACCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACAGCCTCTGAATTTCATCTTTTGTAAGCAATc > 2:411872/1‑149 (MQ=255) cggcccAGCATCAGGGGTGGCATGTTATGAACCCCCACTTTGACAACCACAAAATTTACCCCCCATACGCCCACTACAAAAAGCCCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACt < 2:710496/146‑1 (MQ=255) ccGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTACCCCCCATACGACCACTCCCAGTAGCCCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACt < 1:361126/150‑1 (MQ=255) ccGGCCAGCATCAGCGGTGGCATGTTATAAAGCCCCATTTTGATGACCACAAAATTTACCCCCCATACGCCCCCTACCAGTAGCCCCAACCCCCCATCTTTTCGCGAAATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACt < 1:987732/150‑1 (MQ=255) ccAGCACCAGCGGTGGCATTTTATGAAGCCCCGCTTTGATGACCAAAAAATTTACCCCCCATACCCCCACTCCCAGTAGCGCCAACCCCCCCTCTTTCCGCGCCATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGc < 2:1040769/150‑1 (MQ=255) cAGCACCGGCGGTGGCTGGTTATGACCCCCCCTTTTGATGACCCCAAAATTTACCCCCAATACGCCCACCCCCAGTAGCGCCAACCCCCTATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACtt < 2:1354760/146‑1 (MQ=255) aGCGTCAGCGGTAGCATGTTACGAAACCCCTCTTTATTAACCAAAAAATTTAGCCCCCACTCCCCCACTCCTAGGAGCGCCAACCCCCCATTTATAGGGGACATTAAACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTg < 2:1207404/150‑1 (MQ=255) aTCAGCGGGGGCATGTTATAAAGCCCCATTTTGATGCCAAAAAAATTTACCCCCCATACGCCCACTCCCAGTAGCGCCACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAAt < 1:936902/150‑1 (MQ=255) aGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAc > 1:863522/1‑151 (MQ=255) ggggTGGCATGTTATGAAGCCCCACTTTGATGACCAAAAAATTTAGCCCCCATCCACCCACTCCCAGTAGCGCCAACCCCCCATTTTTTCGCGACATCCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAc < 1:1083366/148‑1 (MQ=255) cGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACtt > 1:350331/1‑151 (MQ=255) cGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACtt > 1:926318/1‑151 (MQ=255) tgTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCCCCAACACCCCATCTTTTCGCGACATTCCACCGCCTCTGCATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACttt > 2:639836/2‑151 (MQ=255) gTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACtttt > 2:784045/1‑151 (MQ=255) ggaattttATGACGCCCCATTTTAATGCCCAAAAATTTTAGCCCCCATCCGCCCACTACCAGTAGCCCCAACCCCCCATTTTTTCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCt < 2:1331446/145‑1 (MQ=255) ggCATTTTATGAACCCCCCCTTTGATGACCACAAAATTTACCCCCCATCCGCCCACTACCAGTAGCCCCAACCCCCCTTCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACttt < 2:935038/148‑1 (MQ=255) ggCATGTTATGAAGCCCCTCTTTGATGCCCACAAAATTTAGCCCCCACACGACCCCTCCCAGTAGCCCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTc < 1:558266/150‑1 (MQ=255) aaccccccttttGATGACCAAAAAATTTACCCCCCATACGACCCCTCCCAGTAGCGCCAACCCCCCATTTTTCCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGa < 2:332414/142‑1 (MQ=255) aacccccATTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATTTTTTCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGtt < 1:1428393/146‑1 (MQ=255) aaGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTg > 1:430301/1‑150 (MQ=255) aGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGAt > 2:60291/1‑151 (MQ=255) ccccACTTTGATGACCACAAAATTTAGCCCCCATACGACCCCTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTc < 1:439268/151‑1 (MQ=255) ccccACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTc > 1:1446310/1‑151 (MQ=255) cccACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCg > 1:769463/1‑151 (MQ=255) cccACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCg > 1:887865/1‑151 (MQ=255) cccACTTTGATGACCAAAAAATTTACCCCCCATACGACCACTACCAGTAGCGCCACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCg < 1:1341900/151‑1 (MQ=255) aCTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGtt > 1:746256/1‑150 (MQ=255) atgaCCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGcc > 2:1178310/1‑151 (MQ=255) gaCCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCgg > 2:187375/1‑151 (MQ=255) aCCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGt > 2:300035/1‑151 (MQ=255) acaAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTac > 1:165424/1‑151 (MQ=255) caAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacg > 1:669764/1‑151 (MQ=255) caAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacg > 1:1448203/1‑151 (MQ=255) aaaaTTAAGCCCCCATACGCCCCCTCCCATTAGCGCCACCCCCCCTTCTTTCCCCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacg < 1:844386/150‑1 (MQ=255) aaaTTTGCCCCCCATCCGCCCACTCCCAGTAGCGCCACCCCCCCATTTTTTCGCAAATTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacgac < 1:401587/151‑1 (MQ=255) tttACCCCCCATACGCCCCCTCCCAGTGGCCCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACgg < 2:178227/150‑1 (MQ=255) tAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCAt > 1:294552/1‑151 (MQ=255) cccccaaccccccACTACCAGTAGCGCCACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCAtt < 1:1441017/138‑1 (MQ=255) cccccATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTa > 2:661038/1‑150 (MQ=255) ccATACGACAACTACCAGTGGCGCCAACACCCCATCTTTTCGCGACATTCTACTGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGCCGGCATTaa > 2:1057956/1‑148 (MQ=255) tACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATgcgc > 1:24184/1‑150 (MQ=255) cGACCACTCCCAGTAGCCCCACCCCCCCATCTTTTCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCa < 2:179687/149‑1 (MQ=255) cGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCaa > 1:1434642/1‑150 (MQ=255) ccccccccAGTAGCGCAAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa < 1:1043943/144‑1 (MQ=255) cccccacaaGTAGCACCACCCCCCCATCTTTGCGCGTCATTTTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa < 2:1459510/142‑1 (MQ=255) ccccTACCAGTGGCCCCAACACCCCACCTTTCCGCGCCATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa < 1:536680/147‑1 (MQ=255) ccACTCCCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATaa < 1:734866/151‑1 (MQ=255) ccACTCCCAGTAGCGCCAACCCCCAATCTTTCCGCGACTTTTTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATaa < 1:1048306/151‑1 (MQ=255) ccACTCCCAGTAGCCCCACCCCCCCATCTTTTCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa < 2:703302/150‑1 (MQ=255) ccACTACCAGTAGCCCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATaa < 2:249852/151‑1 (MQ=255) cACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATa > 1:1256494/1‑149 (MQ=255) cTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTc > 1:534119/1‑151 (MQ=255) aCCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTc > 2:1257853/1‑149 (MQ=255) ccggaggcgcCACCCCCCCTTTTTTTCGCGACATCCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGc < 1:328990/144‑1 (MQ=255) ccAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGt < 1:661052/147‑1 (MQ=255) ccAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCg < 1:201943/150‑1 (MQ=255) ccAACCCCCCATCTTTCCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCgg < 1:71154/151‑1 (MQ=255) cAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCgg > 2:140530/1‑150 (MQ=255) aaCACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGAt > 2:447966/1‑151 (MQ=255) aaCACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGAt > 1:576812/1‑151 (MQ=255) | TCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTCGGAT > NC_000913/1620975‑1621265 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |