Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 963,273 3 bp→CGT coding (1279‑1281/1674 nt) rpsA → 30S ribosomal subunit protein S1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913963,2730GC100.0% 365.6 / NA 95E427Q (GAA→CAA) rpsA30S ribosomal subunit protein S1
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (42/53);  total (42/53)
*NC_000913963,2740AG100.0% 371.1 / NA 95E427G (GAA→GGA) rpsA30S ribosomal subunit protein S1
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (42/53);  total (42/53)
*NC_000913963,2750AT100.0% 375.4 / NA 95E427D (GAA→GAT) rpsA30S ribosomal subunit protein S1
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (42/53);  total (42/53)

TCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCGTT  >  NC_000913/963133‑963416
                                                                                                                                            |||                                                                                                                                             
tCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTAtctc                                                                                                                                       >  1:43683/1‑151 (MQ=255)
 cATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTAtctc                                                                                                                                       <  1:348175/150‑1 (MQ=255)
     ggCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTgg                                                                                                                                  <  2:186069/151‑1 (MQ=255)
       cTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTTGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGc                                                                                                                                >  1:778010/1‑151 (MQ=255)
         tGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGc                                                                                                                                <  1:867892/149‑1 (MQ=255)
          ggACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGt                                                                                                                              <  1:579237/150‑1 (MQ=255)
           gACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTa                                                                                                                            <  2:577057/151‑1 (MQ=255)
              ggcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAAc                                                                                                                         >  2:59366/1‑151 (MQ=255)
              ggcggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAAc                                                                                                                         >  2:588272/1‑151 (MQ=255)
                cggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAg                                                                                                                       <  1:1375571/151‑1 (MQ=255)
                 ggcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGc                                                                                                                      >  1:713328/1‑151 (MQ=255)
                  gcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAg                                                                                                                       <  2:246109/149‑1 (MQ=255)
                  gcATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCt                                                                                                                     <  2:563126/151‑1 (MQ=255)
                   cATCGACGGCCTGGTTCACCTGTCTGACATCGCCTGGAACGTTGCAGGCGACGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTc                                                                                                                    <  2:910528/151‑1 (MQ=255)
                    aTCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCg                                                                                                                   >  2:152553/1‑151 (MQ=255)
                      cGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGc                                                                                                                  <  1:554007/150‑1 (MQ=255)
                       gACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCag                                                                                                                <  2:209979/151‑1 (MQ=255)
                        aCGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCaga                                                                                                               <  1:1396916/151‑1 (MQ=255)
                             cTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCaga                                                                                                               >  1:306565/1‑146 (MQ=255)
                             cTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCaga                                                                                                               >  1:624657/1‑146 (MQ=255)
                              tGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATcc                                                                                                         >  1:917294/1‑151 (MQ=255)
                               ggTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATc                                                                                                          <  2:1053271/149‑1 (MQ=255)
                                   cACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTca                                                                                                    <  1:1371735/151‑1 (MQ=255)
                                   cACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTca                                                                                                    <  1:1307795/151‑1 (MQ=255)
                                   cACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTca                                                                                                    <  2:1424066/151‑1 (MQ=255)
                                    aCCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTACGTGAATCCAAAAAAGGCGACGAAGTCGCAGCAGTTGTTCTGCAGATTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTca                                                                                                    <  2:76964/150‑1 (MQ=255)
                                        gTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCaacaac                                                                                               >  1:888411/1‑151 (MQ=255)
                                         tCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTcaaca                                                                                                 <  2:1160550/148‑1 (MQ=255)
                                            gACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACt                                                                                              <  2:40300/148‑1 (MQ=255)
                                            gACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTggg                                                                                           >  1:69309/1‑151 (MQ=255)
                                               aTCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTg                                                                                        >  2:1036557/1‑151 (MQ=255)
                                                  tcCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGctc                                                                                     >  2:1424824/1‑151 (MQ=255)
                                                   ccTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGctct                                                                                    <  2:278454/151‑1 (MQ=255)
                                                   ccTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGctct                                                                                    >  2:1042223/1‑151 (MQ=255)
                                                   ccTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGct                                                                                      <  2:421203/149‑1 (MQ=255)
                                                    cTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTg                                                                                   >  2:1203593/1‑151 (MQ=255)
                                                      ggAACGTTGCAGGCGAAGAAGCAGTTCGTGAACACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGa                                                                                  <  2:1447493/150‑1 (MQ=255)
                                                       gAACGTTGCAGGCGAAGAAGCAGTTCGTGGATATAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGct                                                                                      <  2:363757/145‑1 (MQ=255)
                                                       gAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAAGTTGACGCAGAACGTCGTCTTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAGCAACTGGGTTGCTCTGaa                                                                                 <  2:1113425/150‑1 (MQ=255)
                                                        aaCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAAc                                                                                >  1:900050/1‑150 (MQ=255)
                                                         aCGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACaa                                                                              <  1:491144/151‑1 (MQ=255)
                                                          cGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAg                                                                             <  1:1405794/151‑1 (MQ=255)
                                                           gTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACa                                                                               >  1:201408/1‑148 (MQ=255)
                                                           gTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACa                                                                               >  1:764398/1‑148 (MQ=255)
                                                             tGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGaa                                                                           >  1:1197592/1‑150 (MQ=255)
                                                              gCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGaaa                                                                          <  1:262648/150‑1 (MQ=255)
                                                               cAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAgg                                                                        <  1:1288712/151‑1 (MQ=255)
                                                                aGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGgc                                                                       <  2:56996/151‑1 (MQ=255)
                                                                 ggCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGgcg                                                                      >  1:1001607/1‑151 (MQ=255)
                                                                  gCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGgcgc                                                                     <  1:1189200/151‑1 (MQ=255)
                                                                    gaagaaGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCt                                                                    >  2:807995/1‑150 (MQ=255)
                                                                     aagaagCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTAt                                                                  >  2:668475/1‑151 (MQ=255)
                                                                     aagaagCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTAt                                                                  >  1:1195957/1‑151 (MQ=255)
                                                                       gaagCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCg                                                                >  1:1020252/1‑151 (MQ=255)
                                                                         agCAGTTCGTGAATGCAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTa                                                              <  1:1348356/151‑1 (MQ=255)
                                                                           cAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAAc                                                            >  1:449/1‑151 (MQ=255)
                                                                               tCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCgg                                                         <  2:272982/150‑1 (MQ=255)
                                                                               tCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCgg                                                         <  1:548250/150‑1 (MQ=255)
                                                                                   gAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTaaa                                                     <  1:1378109/150‑1 (MQ=255)
                                                                                   gAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTaaa                                                     <  1:1186804/150‑1 (MQ=255)
                                                                                   gAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAg                                                    <  2:773359/151‑1 (MQ=255)
                                                                                    aaTACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAgg                                                   <  1:1423854/151‑2 (MQ=255)
                                                                                     aTACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTa                                                  <  2:242163/151‑1 (MQ=255)
                                                                                       aCAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAAc                                                >  2:1246450/1‑151 (MQ=255)
                                                                                          aaaaaGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGc                                             >  2:1219582/1‑151 (MQ=255)
                                                                                           aaaaGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCa                                            <  1:520565/151‑1 (MQ=255)
                                                                                            aaaGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAg                                           <  1:1398195/151‑1 (MQ=255)
                                                                                             aaGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGt                                          >  2:589080/1‑151 (MQ=255)
                                                                                              aGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGtt                                         <  1:126018/151‑1 (MQ=255)
                                                                                                 cgacgaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGAc                                      <  2:420317/151‑1 (MQ=255)
                                                                                                  gacgaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACg                                     >  1:1254303/1‑151 (MQ=255)
                                                                                                  gacgaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACg                                     <  2:1082851/151‑1 (MQ=255)
                                                                                                    cgaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCt                                   <  2:13617/151‑1 (MQ=255)
                                                                                                    cgaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCt                                   >  2:1003451/1‑151 (MQ=255)
                                                                                                     gaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCt                                   <  2:1073951/150‑1 (MQ=255)
                                                                                                     gaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCt                                   >  2:934857/1‑150 (MQ=255)
                                                                                                     gaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCt                                   >  1:664193/1‑150 (MQ=255)
                                                                                                     gaAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTa                                  <  2:71096/151‑1 (MQ=255)
                                                                                                        aTCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAg                               <  1:356053/151‑1 (MQ=255)
                                                                                                        aTCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAg                               <  2:697496/151‑1 (MQ=255)
                                                                                                          cGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGgc                             <  1:1398190/151‑1 (MQ=255)
                                                                                                            cTGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGgcgc                           >  2:430834/1‑151 (MQ=255)
                                                                                                             tGCAGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACTCTAAAGgcgc                           >  1:1336062/1‑150 (MQ=255)
                                                                                                                aGTTGTTCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGAAACTGCAGTTGACGCTAAAGGCGCAAc                        >  2:1254586/1‑150 (MQ=255)
                                                                                                                  ttgttCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGt                     >  1:1036153/1‑151 (MQ=255)
                                                                                                                   tgttCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCg                      >  2:450630/1‑149 (MQ=255)
                                                                                                                   tgttCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACGGCAGTTGACGCTAAAGGCGCAACCGt                     <  1:275488/150‑1 (MQ=255)
                                                                                                                    gttCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGt                     >  1:662174/1‑149 (MQ=255)
                                                                                                                    gttCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGt                     >  2:909056/1‑149 (MQ=255)
                                                                                                                      tCTGCAGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGa                  <  1:152555/150‑1 (MQ=255)
                                                                                                                           aGGTTGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGc            <  2:986132/151‑1 (MQ=255)
                                                                                                                              ttGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGGAGAACTGGCTg          >  1:662589/1‑150 (MQ=255)
                                                                                                                               tGACGCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGTGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGAc        >  1:108882/1‑151 (MQ=255)
                                                                                                                                   gCAGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCg    >  2:773037/1‑151 (MQ=255)
                                                                                                                                     aGAACGTCGTCGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCGtt  <  1:544626/151‑1 (MQ=255)
                                                                                                                                            |||                                                                                                                                             
TCATCGGCTTGGACGGCGGCATCGACGGCCTGGTTCACCTGTCTGACATCTCCTGGAACGTTGCAGGCGAAGAAGCAGTTCGTGAATACAAAAAAGGCGACGAAATCGCTGCAGTTGTTCTGCAGGTTGACGCAGAACGTGAACGTATCTCCCTGGGCGTTAAACAGCTCGCAGAAGATCCGTTCAACAACTGGGTTGCTCTGAACAAGAAAGGCGCTATCGTAACCGGTAAAGTAACTGCAGTTGACGCTAAAGGCGCAACCGTAGAACTGGCTGACGGCGTT  >  NC_000913/963133‑963416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑