Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,350,844	0	A	C	40.0%	123.6 / 19.4	75	L728V (TTA→GTA)	arcB	aerobic respiration control sensor histidine protein kinase, cognate to two‑component response regulators ArcA and RssB
Reads supporting (aligned to +/- strand):  ref base A (36/9);  new base C (0/30);  total (36/39)
Fisher's exact test for biased strand distribution p-value = 2.74e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGG  >  NC_000913/3350699‑3350991                                                                                                                                                      |                                                                                                                                                    gTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCa                                                                                                                                                <  1:938067/151‑1 (MQ=255)   ggCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCAc                                                                                                                                               <  1:449630/150‑1 (MQ=255)   ggCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACt                                                                                                                                              >  2:1377317/1‑151 (MQ=255)      ttttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGAc                                                                                                                                           >  2:711283/1‑151 (MQ=255)       tttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGa                                                                                                                                            <  2:513193/149‑1 (MQ=255)       tttGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGAcc                                                                                                                                          >  2:669113/1‑151 (MQ=255)          gCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGAcccc                                                                                                                                        <  1:1199278/150‑1 (MQ=255)          gCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGAcccc                                                                                                                                        <  2:1334875/150‑1 (MQ=255)            cacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCccgcc                                                                                                                                     <  1:1183003/151‑1 (MQ=255)            cacccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCccgcc                                                                                                                                     >  1:877748/1‑151 (MQ=255)               ccacGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCcgccgc                                                                                                                                   >  1:70464/1‑150 (MQ=255)                   gCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCtt                                                                                                                              >  2:998160/1‑151 (MQ=255)                         aGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAAttt                                                                                                                        >  2:825193/1‑151 (MQ=255)                          gCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGAAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAAtttt                                                                                                                       >  2:877193/1‑151 (MQ=255)                           cACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAAtttt                                                                                                                       >  2:206714/1‑150 (MQ=255)                           cACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑ACAGGCGCCTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAAtttt                                                                                                                       >  1:1181149/1‑150 (MQ=255)                            aCTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTAt                                                                                                                     >  2:300603/1‑151 (MQ=255)                             ctccaccgccgtCACCCCCCTCTTCTTTAATCTCTTCAACCTTTCCCCCGACTTTATCTTCCCGGGCC‑GAAGGG‑TAGGGAGATTGAATTTC‑CTGCCCCAGTTTTTG‑AGATCGGCGAACCCCCACTTACCCCGCCGCACCTTTAAtttt                                                                                                                       <  1:378418/139‑1 (MQ=255)                                ctccggcgtacccccACTTTTCTTCCATCTCTTCAACCAATCCCCCGACGTTATCTGCCGAGG‑C‑GGAAGGTTCAGGAGACGAATTTTG‑CGACCCCATCTGTTGTAGAG‑GGCATCACCCCCCTGCCCCCGCCGCACCTTTAATTTTATGtc                                                                                                                  <  2:384776/137‑1 (MQ=255)                                     tggtgccaccACTTTTCTTTCATCTCTCAAACCCATTCACCTACGTTATCTCCCCAGCCC‑GGACGG‑TCAGAAATCGAAATTTG‑CGGACCAATATATTTTAGAT‑GCCGTACCCCCCCTCCCCCCGCCGCACCTTTAATTTTATGtccttcc                                                                                                             <  2:704949/142‑1 (MQ=255)                                      cgtGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTc                                                                                                           >  1:7571/1‑151 (MQ=255)                                        tgccccccctctTCTTTCATCTCTCCAACCCATCCCCCGCCTTTATCTCCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGCCCCAGCTGTTGCAGAG‑GGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGtcctt                                                                                                               <  1:806090/137‑1 (MQ=255)                                           ctccACTTTTCTTTCATCCTTTAAACCAATACACCGACTTTATCTCCCAAGGCG‑GGAAGG‑ACAGGAGA‑TTAATTTGTCTACCCCAGTTGTGCCAGAG‑GGGAAAACCCCACCGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaaca                                                                                                       <  1:1236258/148‑1 (MQ=255)                                           cGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaaca                                                                                                       >  1:8506/1‑150 (MQ=255)                                            cccACCCTTCTTTATTCTCTCAAATCCTTCCCCCGGCGTAATCTCCCAACGCC‑GGAGGG‑TAGGGAGACTAATTTTG‑CGGCCCCAGTTGTTGAAGAG‑GGATAACCCCCGCCCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaa                                                                                                         <  1:774562/146‑1 (MQ=255)                                             cccctctTTTTCCATCTCTTCAACCCATCCCCCGACGTTTTCTCCCCAGGCG‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGCCCCAGCTGTTGCAGAT‑GGCGAACCCCCACTACCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATg                                                                                                    <  1:1169918/148‑1 (MQ=255)                                             cccctctTCTTCCTTCTCTTCAACCCATCCCCCATCTTTCTCTCCCCGGGCC‑GGAGGG‑TAAGGAGACTGATTTTG‑CTGCCCCAGTTTTTGCAGTT‑GGCTTACCCCCACTCACCCCGCCGCACCTTTAATTTTATGTCCTTCCTcaaca                                                                                                       <  2:799155/145‑1 (MQ=255)                                               aCTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGcc                                                                                                  >  2:157073/1‑151 (MQ=255)                                                 tcttctTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtt                                                                                                >  1:379994/1‑151 (MQ=255)                                                  cttcttTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt                                                                                               >  1:249422/1‑151 (MQ=255)                                                   ttttttCATCTCTTAACCCCATCCCCCGATGTTATCTCCCCAGGCC‑GGAAGG‑TAAGGAGACTAATTTTG‑CTGCCCCAGCTGTTGAAGAT‑GGCGAACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt                                                                                               <  1:742429/147‑1 (MQ=255)                                                   ttctttctTCCCTTCAACCCATCCCCCGTCTTTATCTCCCCAGGCG‑GGAAGG‑TCAGGAGCCTGAATTTG‑CTACCCCAGTTGTTGAAGAT‑GGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGcc                                                                                                  <  2:600662/147‑1 (MQ=255)                                                   ttcttTCATCTCTTCAACCCATCCCCCGACTTTATCTCCCCAGGCG‑GGAGGG‑TCAGGAGACTGATTTTG‑CTGCCCCAGTTTTTGCAGAT‑GGCGAACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtt                                                                                                <  2:500071/149‑1 (MQ=255)                                                    tttttCATCTCTTCATCCCATCCCCCGACTTTATCTCCCCGGGCC‑GGAAGG‑TAAGGAGACGGAATTTG‑CTGCCCCAGTTGTTGAAGAT‑GGCGTAACCCCCCTACCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttt                                                                                               <  1:817980/147‑1 (MQ=255)                                                     cttTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt                                                                                            >  2:955379/1‑151 (MQ=255)                                                      tttCATCTCTTAAACCCATCCCCCGACGTTTTCTTCCCAGGCG‑GGAGGG‑TCGGGAGACTGAATTTG‑CTGCCCCAGCTGTTGCAGAT‑GGCGTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt                                                                                            <  1:995185/150‑1 (MQ=255)                                                       ttcttcTCTTCAACCCTTCCCCCGCCTTTATCTCCCCGGGCG‑GGAAGG‑TCAGGAGACTGATTTTG‑CTGACCCTTTTGTTGCAGGT‑GGCTTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCtttttt                                                                                            <  2:552000/149‑1 (MQ=255)                                                       tccATCTCTTAAACCCTTTCCCCGACTTTTTCTCCCCAGGCC‑GGAAGG‑TCGGGAGACTAATTTTG‑CTGCCCCAGTTTTTGCAGTT‑GGCGTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCttttt                                                                                             <  2:1364242/146‑1 (MQ=255)                                                       tcatcctctACAACCCAGTCACCGTCGTTATCTTCCCACGCC‑GGAAGG‑GAAGGACACTAAATTTG‑CTGACCAACGTGTTGCAGGG‑GCCTTACCCCCACCACCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTa                                                                                           <  2:163743/145‑1 (MQ=255)                                                        tCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATc                                                                                         >  1:530094/1‑151 (MQ=255)                                                           tctcTTCAAACCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAGTTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg                                                                                      >  2:1245793/1‑151 (MQ=255)                                                            ctctTCACCCCATCCCCCGCCTTTATCTCCCCAGGCC‑GGAAGG‑ACAGGAGACTGATTTTG‑CTCCCCCATCTTTTGCAGAG‑GGCGAACCCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATc                                                                                         <  2:1242513/147‑1 (MQ=255)                                                            ctctTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTgc                                                                                     >  2:689652/1‑151 (MQ=255)                                                               ttCAACCCATTCCCCGACGTTATCTCCCCGGGCC‑GGAGGG‑TCAGGAGACTGAATTTG‑CTGCCCCAGTTGTTGCAGAT‑GGCGTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg                                                                                      <  1:492151/147‑1 (MQ=255)                                                               tccAACCCATCCCCCGACTTTTCCTCCCCAGGCG‑GGAAGG‑ACAGGAGACGAATTTTG‑CTGCCCCAGTTTTTGAAGAG‑GGCTTACCCCCCCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTg                                                                                      <  1:450547/145‑1 (MQ=255)                                                               tacagtctttccACCGACGTTATCTCCCCGGGCC‑GGAAGG‑GGAGGCAACGGAATTTG‑CTGGCCCAGCGGTTGCAAAG‑GGCGAACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTgcg                                                                                    <  1:904024/138‑1 (MQ=255)                                                                     ccATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTc                                                                               >  1:467036/1‑148 (MQ=255)                                                                     ccATCCCCCGACTTTATCTCCCCAGCCG‑GAAAGG‑TCAGGAGACTGATTTTG‑CTCCCCCAGCTGTTGCAGGT‑GGCGTACCCCCCCGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGcc                                                                                  <  1:782031/145‑1 (MQ=255)                                                                        tcccccgccgTTATCTCCCCAGGCG‑GAAAGG‑CCGGGAAACTAATTTTC‑CTCCCCCAGTTTTTGAAGGT‑GGCGTACCCCCCCTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGa                                                                            <  2:492829/144‑1 (MQ=255)                                                                        tcccccGACTTTATCTCCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGCCCCAGCTTTTGCAGAG‑GGCTTACCCCCACTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGAtt                                                                          <  1:178613/146‑1 (MQ=255)                                                                          cACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCg                                                                        >  1:16971/1‑150 (MQ=255)                                                                          cACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCg                                                                        >  2:1304158/1‑150 (MQ=255)                                                                             cGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTc                                                                    >  1:570083/1‑151 (MQ=255)                                                                                 gTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGc                                                                >  1:787166/1‑151 (MQ=255)                                                                                       ttCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCATGCTg                                                          >  2:413158/1‑151 (MQ=255)                                                                                         ccccGGCCGGGAAGG‑TCAGGAGACTAATTTTG‑CTGCCCCAGTTGTTGCAGAG‑GGCTTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCa                                                               <  2:613780/145‑1 (MQ=255)                                                                                          ccAGGCG‑GGAAGG‑TAGGGACACTAAATTTG‑CAGCCCCATTTTTTGCAGAG‑GCCGTACCCCCACTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACa                                                       <  2:832037/151‑1 (MQ=255)                                                                                           ccagtcggtaaGG‑TCAGGACCCAGATTGCG‑CTCCCCTAGGTGTTGCAGTG‑GGCGAACCCCAACGGCCCCCGCCGCACCTTTAAGTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACa                                                       <  2:668293/142‑1 (MQ=255)                                                                                           cAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGCT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                      >  1:991132/1‑151 (MQ=255)                                                                                            aGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                      >  2:810362/1‑150 (MQ=255)                                                                                                c‑GGAAGG‑TCAGGAGACTGAATTTG‑CTAACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGccc                                                 >  1:54138/1‑151 (MQ=255)                                                                                                  ggAAGG‑TCGGGAGACTAAATTTG‑CTGCCCCAGTTGTTGCAGAT‑GGCTAACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACAt                                                      <  2:132204/145‑1 (MQ=255)                                                                                                    aaGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGc                                              >  2:1170083/1‑151 (MQ=255)                                                                                                           aGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCatcatc                                        >  2:609684/1‑151 (MQ=255)                                                                                                                     aTTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAac                               >  2:603613/1‑150 (MQ=255)                                                                                                                            tGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCt                         >  2:829840/1‑150 (MQ=255)                                                                                                                              ccccttttGTTGCAGTT‑GCCACACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAAc                      <  2:388253/144‑1 (MQ=255)                                                                                                                                     tGTTGCAGAT‑GGCGTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTc                 <  2:407260/149‑1 (MQ=255)                                                                                                                                             gagggCGCACCCCCACGGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCa         <  1:580047/147‑1 (MQ=255)                                                                                                                                              t‑GGCTTACCCCCACAGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACGCCGCTAAc                      <  2:522340/135‑1 (MQ=255)                                                                                                                                              t‑GGCGTACCCCCCCTGCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCa         <  1:1288863/148‑1 (MQ=255)                                                                                                                                                ggCGTACCCCCCCTCCCCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAg        <  1:300610/148‑1 (MQ=255)                                                                                                                                                ggCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCt      >  1:1337029/1‑150 (MQ=255)                                                                                                                                                  cGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCg   >  1:378231/1‑151 (MQ=255)                                                                                                                                                   gTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCgg  >  2:149267/1‑151 (MQ=255)                                                                                                                                                      |                                                                                                                                                    GTGGCTTTTGCCACCCACGCTTTCAGCACTTCTACGTCGTGACGCCACTCTTCTTTCATCTCTTCAATCCATTCACCGACGTTATCTTCCCAGGCC‑GGAAGG‑TCAGGAGACTGAATTTG‑CTGACCCAGCTGTTGCAGAT‑GGCGTAACCCCACTGACCCCGCCGCACCTTTAATTTTATGTCCTTCCTCAACAATGCCTTTTTTATCCTGCGCCGTCAGATTCGACTCCAGCACGCTGACATAGCCCGGCATCATCTTCTCAAACACCGCTAACCCGTCGGTGATCAGCTTCGG  >  NC_000913/3350699‑3350991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑