| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,579 | 0 | T | G | 42.5% | 131.2 / 13.6 | 81 | V289G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (6/40); new base G (34/0); total (41/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.74e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACA > NC_000913/599430‑599722 | gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGgtggtg < 2:966561/151‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGa < 1:576390/149‑1 (MQ=255) acgacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGCTGTTGCGAAGGACCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGACGGgggggtattact > 1:657684/1‑145 (MQ=255) cTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCg > 1:462825/1‑150 (MQ=255) acaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCaa < 1:1304039/151‑1 (MQ=255) aTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGggggtggccccgtgttcc > 2:403821/1‑132 (MQ=255) tCGGTTTAAAAGCCAGTGAAAATGGCGTCCCCGTTTACCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATTCGCCGGGGCATGGCCGATATAAACGGCTAAGGCGAGGTTGCGGACGGGGTTGTGAACCTACGAT‑CTCGCaaga < 2:1022784/150‑3 (MQ=255) cGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGGGGGGGCCCTGCCAT‑CCCGCgaaaa > 2:72533/1‑150 (MQ=255) ttttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGTGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGGAGTGGCGGGCGGGGGGGGGGTTCTGCGAT‑CCCGCcaaaa > 2:115726/1‑148 (MQ=255) ttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGTGGGGTTACCGCCGT‑GCGGCAAAAAAGccc > 1:74218/1‑151 (MQ=255) ttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGcc < 1:584906/150‑1 (MQ=255) tAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGccc < 2:922144/150‑1 (MQ=255) aaaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCg < 2:341982/150‑1 (MQ=255) aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGAGTCTTCGAG‑CCCGGAAAAAAGccc > 1:702881/1‑147 (MQ=255) aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGAGGGGGGGGGAGACCTCGATCCCGCCGAAAACGcc > 2:991375/1‑147 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCCGCGGT‑CCGGGAAAAAAGccc > 2:317670/1‑143 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGGCCTGCGAT‑CCGGCGAAAACGCCCggggaggg > 2:534008/1‑144 (MQ=255) tGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTTGTGCGGT‑CCCGCAAAAAAGCCCGCGAAGt > 2:827918/1‑147 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGGGGGGGGGGGAGCCTGTGATCCCGGCACAAAGGccggggag > 2:610432/1‑139 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGGAAAAACGCCCCGGAAGGGATcg > 1:241811/1‑150 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCgccgcc < 1:1095782/150‑1 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCCGCAAAAAAGCCCGCGAAGGGGTCGCCGCCGTg > 2:316724/1‑148 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGCGATCCCGCGAT‑CCCGCCAAAACGCCCCAGAAGTGATCGCCGGCGCGAAgg > 1:304018/1‑149 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGGGCTGGGGT‑CAGGCAAAAAAGCCCGAGAAGGGATTGGCGCCGCGAAgg > 2:727704/1‑148 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAgg > 1:309825/1‑148 (MQ=255) gTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAG‑CCGGCAAAAACGCCCGCGGAGTGATCGCCGCCGTGAAgg > 1:34195/1‑148 (MQ=255) tttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGTGGGGGTGCTGCGAT‑CCGGCAAAAAAGCCCCGGGAGGGATTGGCGCCGGTAAGGaaa > 2:74047/1‑148 (MQ=255) tttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGGGAAgg > 1:353109/1‑147 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCCAAAACGCCCGAGAAGAGATCCCCGCCGTGAAGGACAAAc > 1:910509/1‑150 (MQ=255) cTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCCAGAAGTGATAGCCGCCCTGAAGGACAAACAgg > 1:747633/1‑151 (MQ=255) cTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGGTCCTGCGGT‑TCCGCAAAAACGCCCGAGAAGGGAGCGCCGCCGCGGAGGACAAACCgg > 2:580520/1‑151 (MQ=255) cTGCGCGATGTTGCGAAGGCCCAGGTTGGCCCGGAGATGCCGCGGGGCATTGCCGACCTACCCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGCTCCGGCCAT‑CCGGCAAAAACGCCCGATAATTGATCGCCGCCGTGAAGGACAAACTg < 2:231585/150‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaa < 1:1148555/151‑1 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaa < 1:92079/151‑1 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 1:550685/151‑1 (MQ=255) cgcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 1:1348665/151‑1 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCTGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 2:198681/150‑1 (MQ=255) gATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAAGACAAACTggga > 2:187342/1‑145 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 1:644946/151‑1 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGA‑CCGGCCAAAAAGCCCCAGGAAGGATCGCCGCCGGGGAGGGCCAACAGGaacgcctgg > 2:650537/1‑144 (MQ=255) tGCGAAGGTCCAGATTGGCCCGGGGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGACCCTCGAC‑GCGGTGCAAACCGCCGCGAAGCGAAACCCGGCGCGTAGGACAAACTggtgaatgcga > 2:878190/1‑140 (MQ=255) tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGGGAAGGACAAACTGGAAACGCTGaa > 1:850793/1‑150 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTTGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaa < 2:750087/150‑1 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGGGAAGGACAAACTGGAAAAGCTGgaa > 1:1169886/1‑150 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGGGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaa < 2:770576/150‑1 (MQ=255) gAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagt < 2:16302/151‑1 (MQ=255) gTCCAGATTGGCCCGGAGTTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagtag < 1:875316/149‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTc < 2:1116215/151‑1 (MQ=255) gTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGGT‑CCGGCAAAAAAGCCCGGGAAGGGATCGCCGCCGGGAAGGGCAAAAAGGAAAAGCTGGAAagta > 1:390410/1‑148 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGTCCCGCGGT‑CCCGCAAAAACCCCCGAGAAGTGGTCGCCGCCGGGGAGGACAAAATGGGAACGCTGAAAAGGAGTCTG‑cc > 2:1165935/1‑150 (MQ=255) ttGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCgg < 1:1280703/150‑1 (MQ=255) ggCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAg < 1:911740/151‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAgg < 1:247146/151‑1 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAATCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGc < 1:837706/151‑1 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGTAACCCGGGGT‑CCGGAAAAAACGCCCGAGGAGGGAGCGCCGCCGGGAAGGACAAAATTGGAAAGCTGGAAAATAGTCTG‑CCgggcgg > 1:730810/1‑144 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCCGCAAAAAAGCCCCCGAAGAGATCGCCGCCCGGGAGGACAAAATGGAAAAGCTGAAAAGTAGTGTGCCCGGAAgcg > 2:1318355/1‑148 (MQ=255) ggAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTg < 2:1083148/151‑1 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAAAGCTTAAAAGTAGTCTG‑CCGGAAGGCgggg > 1:450287/1‑151 (MQ=255) agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGga < 2:832082/151‑1 (MQ=255) agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTGCGGT‑CCGGCAAAAAAGCCCGGGAAAAGGTCGCCGCCGTGGAGGACAAACTGGAAACGCCGAAAAGTAGTCTG‑CCGGGAggggggg > 2:1368303/1‑145 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGgag < 1:1101239/151‑1 (MQ=255) cgcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAg < 1:70923/151‑1 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAg < 2:747614/150‑1 (MQ=255) ccGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGAAGGCTG‑CCGGAAgggggggggaaaggt > 1:336345/1‑138 (MQ=255) ggggCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTac < 2:647382/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTacaaca < 1:934087/150‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATAc < 1:732031/150‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACg < 2:944482/151‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGTGATCCTGCGGA‑TCGGGAAAAAAGCCCCAGGAGTGATTGCCGCCGTGAAGGGCAAAATTGAAAAGGTGAAAAGGAGTTGG‑GCGGAAGGCGTGGAGATAATTACAACATa > 1:1069350/1‑149 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGAt > 1:360795/1‑151 (MQ=255) gAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATc < 1:394997/151‑1 (MQ=255) aaCTAAACGGTGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATc < 1:532537/150‑1 (MQ=255) cTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGGGATCCTGCGAT‑ACGGCAAAAACGCCCGAGGAGTGATCGCCGCCGTGGAGGACAAACTGGGAACGCTGAAAAGTAGTCTG‑CCCGAAGGCGTGGAGATAGTTACAACATACGATc > 1:314060/1‑148 (MQ=255) tAAACGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGGTCCTTCGAT‑CCGGCAAAAACGCCCGAGGAGGGATCGGCGCCCGGAAGGGCAAACTGGAAACGCTGGAAAGGAGTCCG‑ACGGAAGGGGGGGGGATAGGTAAAACATa > 2:156483/1‑142 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGcag < 2:787092/150‑1 (MQ=255) aaaCGGCGAAGGCGAAGTGGCGGGCGGGGGGGGGATCCTTCGAT‑CCCGCAAAAACGCCCGGGAAGGGATCGCCCCCCTGTAGGACAAACTGGGAACGCTGAAAAGGAGGCTG‑CCGGCAGGGGGGGGGATAGTTATAACATAAGATCGccg > 1:285421/1‑148 (MQ=255) gaaggcgaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCa < 2:747526/151‑1 (MQ=255) gaaggcgaagTGGCGGGCGGGGGGGGGGTCCTGCGAT‑CCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGGGGAGGACAAAATGGAAAAGCTGAAAAGAAGTCTG‑CCGGGAGGCGTGGGGGTAGTTTCAAAATACGATCGCAGCCAGCTcc > 2:929099/1‑150 (MQ=255) ggcgaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTg < 1:187348/151‑1 (MQ=255) gaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc < 1:1336335/151‑1 (MQ=255) gaagTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAcc < 1:474594/151‑1 (MQ=255) cgggcgggGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCAt > 1:268176/1‑151 (MQ=255) cgggGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 2:159462/1‑151 (MQ=255) ggggTGGTAATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAGCTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATGCGATCGCAGCCAGCTCATTGGCCGCGGCATAGACa < 2:155337/151‑1 (MQ=255) | GCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGCGGGGTGGTGATCCTGCGAT‑CCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTG‑CCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACA > NC_000913/599430‑599722 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |