Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,621,118 | 0 | A | C | 43.7% | 94.4 / 25.6 | 72 | V7G (GTG→GGG) | eamA | cysteine and O‑acetyl‑L‑serine efflux system |
Reads supporting (aligned to +/- strand): ref base A (31/9); new base C (0/31); total (31/41) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 2.51e-12 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
TTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTC > NC_000913/1620973‑1621261 | attCGGTCGTGCGACAAAAAAGATAGCCGGAAACGCGACCAGCATAAAGCTCAAACCGCCCAGCATCAGCGGCGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACCACCAGTATCGCCAACAcccc > 1:1285654/2‑150 (MQ=255) ggTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCt < 1:543888/150‑1 (MQ=255) cGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTc < 1:650355/151‑1 (MQ=255) gACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGAc < 2:582483/151‑1 (MQ=255) aCAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGAc < 1:470473/150‑1 (MQ=255) aaaaaaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACAtt > 2:1135607/1‑151 (MQ=255) aaaaaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTc > 2:392162/1‑151 (MQ=255) aaaaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCt > 1:822876/1‑151 (MQ=255) aaaaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCt > 2:144065/1‑151 (MQ=255) aaGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGGGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTAc > 1:1193372/1‑151 (MQ=255) gATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCg > 2:999545/1‑151 (MQ=255) aTAGCCGGAAAAGAGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCCTGTTATGAAGCCCCACTTTGATGACCCCAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGc > 1:181477/1‑151 (MQ=255) gCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCct < 1:833864/150‑1 (MQ=255) aaaaGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAAt > 2:854224/1‑151 (MQ=255) aaGCGACCAGCAAAAACCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCCTTTTGATGCCCACAAAATTTAGCCCCCATACGACCCCTACCAGTAGCGCCAACACCCCATCTTTCCGCGACTTTCTACCGCCTCTGAAttt < 1:293449/151‑1 (MQ=255) ggccAGAAAAAAGCCAAAACCGGCCAGCACCAGGGGTGGCATGTTATGAACCCCCACTTAGATAACCACAAAATTTGGCCCCCATACGCCCTCTACCAGTAGCCCCAACCCCCCACTTTTCCGCGAAATTCTACCGCCTCTGAATTTc < 1:402622/146‑1 (MQ=255) gACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATc > 2:195523/1‑151 (MQ=255) aaaaaGCCCAAGCCGCCCACCACCGGCGTTGGCATTTTATAAACCCCCATTTTAATGACCACAAAATTTTCCCCCCATCCGACCACTCCCATTAGCGCCACCCCCCCTCCTTTTCGCGATTTTCTACCGCCTCTGAATTTCATCTTTTGt < 1:372990/148‑1 (MQ=255) aTAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGt > 2:1052236/1‑150 (MQ=255) tAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTa > 1:11880/1‑150 (MQ=255) aaGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGc > 1:1090270/1‑151 (MQ=255) gcAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATc > 1:966197/1‑151 (MQ=255) aaaCCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGCCCACTACCAGTAGCGCCAACCCCCCATTTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCaa < 2:1295141/147‑1 (MQ=255) aCCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACt > 2:314122/1‑151 (MQ=255) ccGGCCAGCACCGGGGGGGGCATGTTAGGAAACCCCATTTTGATGACCAAAAATTTAAGCCCCAACACGCCCCCTCCCAGTCGCCCCAACCCCCCATCTTTCCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACtt < 2:95017/151‑1 (MQ=255) ggCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACtt > 2:788596/1‑149 (MQ=255) ggCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACtt > 1:1058092/1‑149 (MQ=255) ccAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAATTTTACCCCCCATACGCCCCCTACCAGTAGCGCCAACCCCCCATTTTTTCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGc < 2:582437/150‑1 (MQ=255) ccAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCct < 2:1078968/116‑1 (MQ=255) cATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAAt > 2:761671/1‑151 (MQ=255) cAGCGGTGGCATGTTATGAACCCCCCCTTTGATGACCACAAAATTTAGCCCCCATCCGCCCACCCCCAGTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTa < 2:428796/151‑1 (MQ=255) aGCGGTGTGATGTTATGAGCCCCCCCTTTAAACACCAAAAATTTTACCCCCAATACAACCCCCCCCATTAGCCCCACCGCCCAATCTTTTCGAGAAATTTTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTAc < 1:416604/151‑1 (MQ=255) ggggTGGCATGTTATGAACCCCCCCTTTGATGACCAAAAAATTTCCCCCCCATACGACCCCTCCCATTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACt < 1:1086063/149‑1 (MQ=255) cGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACtt > 2:714952/1‑151 (MQ=255) ggTGCCATTTTATGAACCCCCACTTTGATCACCACAAATTTTGCCCCCCATCCGCCCACTCCCAGTAGCGCAACCCCCCCATTTTTCCGCAACTTTCAACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAAtt < 1:1139408/145‑1 (MQ=255) ggaatattagaaaGCCCCCTTTTGATCACCAAAAATTTTAGCCCCCATATAACCACTCCCAACAGCGCAACCACCCTTTTTTTTCCCTAAATTCTTCCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAAt < 1:487556/130‑1 (MQ=255) ggCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATCCGACCACTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCGATCAACTTAGCTGAATTTACtttt < 2:969613/149‑1 (MQ=255) aTGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCttt > 1:299505/1‑150 (MQ=255) ttATGAAGCCCTACTTTGATCACCAAAAAATTTAGCCCCAATACAACCACTCCCAGTAGCGCCAACCCCCCTTCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCttt < 2:756227/147‑1 (MQ=255) tATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAAc > 2:286885/1‑149 (MQ=255) aTGAAGCCCCACTTTTATGACCACAAAATTTAGCCCCCATACGACCTCTACCAGTAGCCCCACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTTACa < 2:196916/149‑1 (MQ=255) aTGAACCCCCACTTGGTTGACCAAAAAATTAAGCCCCCATACGCCCCCTCCCAGAGGCCCCACCCCCCCATTTTTTCGCGCCATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACa < 2:196918/149‑1 (MQ=255) tGAACCCCCCTTTTGATGCCCAAAAAATTTACCCCCCATCCGCCCACTCCCAGTAGCGCAACCCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAg < 2:1143163/149‑1 (MQ=255) aaGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTg > 1:812703/1‑150 (MQ=255) gCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGAtt > 1:1173520/1‑151 (MQ=255) ccccACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGAt < 2:782444/149‑1 (MQ=255) ccccACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTCCCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTc < 2:86504/151‑1 (MQ=255) ccccACTTTGATCACCAAAAAATTTACCCCCCATCCGCCCCCTACCAGTAGCCCCAACCCCCCATCTTTCCGCGATTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGAtt < 1:779796/150‑1 (MQ=255) ccccACTTTGATACCAACAAAATTTACCCCCCATACGACCCCTCCCAGTAGCACCACCCCCCCTTTTTTCCGCGATATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAATAGTTGAtt < 1:285025/150‑1 (MQ=255) cccACTTTGATCACCACAAATTTTAGCCCCCATCCGCCCAGTCCCAGTAGCCCAACCCCCCCATCTTTCCCCCACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCg < 1:1059596/151‑1 (MQ=255) aCTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGtt > 1:936597/1‑150 (MQ=255) ttGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACCCCCCACCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAg < 2:81141/149‑1 (MQ=255) atgaCCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGcc > 2:558994/1‑151 (MQ=255) acaAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTac > 2:425091/1‑151 (MQ=255) aaaaaaTTTAGCCCCCATCCACCCCCTCCAGGTAGCGCCAACCCCCCATCTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTac < 1:254793/149‑1 (MQ=255) aaatTTTACCCCCCATACGCCCACTACCAGTAGCGCAAACCCCCATTATTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacg < 1:231815/150‑1 (MQ=255) aaTTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTacgacg > 2:123426/1‑151 (MQ=255) aTTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACgg > 1:597606/1‑151 (MQ=255) tttAGCCCCCATACGACCACTACCAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACgg < 2:877841/150‑1 (MQ=255) cccccATACGCCCCCTCCCAGTACCCCCAACCCCCCTTCTTTCCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGc < 2:660087/146‑1 (MQ=255) cccATACGCCCACTCCCAGAGGCCCAACCCCCCCATCTTTTCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATg < 1:386431/151‑1 (MQ=255) cgccctctcccAGTAGCCCCAACCCCCCATCTTTCCGCAACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCaa < 2:454915/141‑1 (MQ=255) ccaCCACTCCCAGTAGCGCCAACCCCCAATTTTTTCGCGACATTCTTCCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCaaa < 2:544766/149‑1 (MQ=255) cGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCaa > 1:795556/1‑150 (MQ=255) cccctcccAGTAGCGCCAACACCCCATCTTTTCGCGACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCaaa < 2:963891/142‑1 (MQ=255) ccACTACCAGTAGCCCCACCCCCCCATTTTTCCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCa < 2:709333/146‑1 (MQ=255) tACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTc > 1:85012/1‑150 (MQ=255) tACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCg > 1:153394/1‑151 (MQ=255) ccAGTAGCGCCAACCCCCCATTTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCg < 1:251082/149‑1 (MQ=255) ccAGTAGCGCCAACCCCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCg < 2:487694/149‑1 (MQ=255) cAGTAGCGCCACCCCCCCATCTTTCCGCCACTTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTc < 2:111687/147‑1 (MQ=255) gcCAACCCCCCTTTTTTCCCCGACGTTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTc < 1:1250751/150‑1 (MQ=255) | TTTCGGTCGTGCGACAAAAAAGATAGCCGGAAAAGCGACCAGCATAAAGCGCAAACCGGCCAGCATCAGCGGTGGCATGTTATGAAGCCCCACTTTGATGACCACAAAATTTAGCCCCCATACGACCACTACCAGTAGCGCCAACACCCCATCTTTTCGCGACATTCTACCGCCTCTGAATTTCATCTTTTGTAAGCAATCAACTTAGCTGAATTTACTTTTCTTTAACAGTTGATTCGTTAGTCGCCGGTTACGACGGCATTAATGCGCAAATAAGTCGCTATACTTC > NC_000913/1620973‑1621261 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |