New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2798605	0 (0.000)	76 (0.990)	67/298	0.2	100%	intergenic (‑110/‑559)	stpA/alaE	DNA binding protein, nucleoid‑associated/alanine exporter, alanine‑inducible, stress‑responsive
	?	NC_000913	3583428 =	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

GGGTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGCTGTTATTTTCTGAAACTCTCAGAATAATTTCAAGATTATATATTAGCCATTTTGATGAGTAATTTAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAA  >  NC_000913/2798456‑2798755                                                                                                                                                      |                                                                                                                                                       gggTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCgag                                                                                                                                                        <  1:1179798/150‑1 (MQ=255)   gTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggt                                                                                                                                                     <  1:794860‑M1/151‑4 (MQ=255)     gCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtg                                                                                                                                                    >  2:223874‑M1/1‑146 (MQ=255)     gCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtg                                                                                                                                                    <  2:489220‑M1/150‑5 (MQ=255)        aaTGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgc                                                                                                                                                >  1:526646‑M1/1‑143 (MQ=255)        aaTGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgc                                                                                                                                                <  2:1168912‑M1/151‑9 (MQ=255)         aTGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgct                                                                                                                                               <  1:87568‑M1/151‑10 (MQ=255)          tGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctg                                                                                                                                              >  2:826086‑M1/1‑141 (MQ=255)          tGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctg                                                                                                                                              >  2:566470‑M1/1‑141 (MQ=255)            ttATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgcc                                                                                                                                            >  1:723194‑M1/1‑139 (MQ=255)              aTTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaa                                                                                                                                          <  2:973098‑M1/151‑15 (MQ=255)                       ttGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgat                                                                                                                                 >  1:178910‑M1/1‑128 (MQ=255)                         gTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgattt                                                                                                                               <  2:1046731‑M1/151‑26 (MQ=255)                         gTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatt                                                                                                                                <  1:764899‑M1/150‑25 (MQ=255)                             cATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtg                                                                                                                           <  2:561060‑M1/151‑30 (MQ=255)                              aTTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgt                                                                                                                          <  2:643426‑M1/151‑31 (MQ=255)                              aTTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgacgctgccaacttactgatttagtgt                                                                                                                          >  2:1031397‑M1/1‑121 (MQ=255)                                tACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtat                                                                                                                        >  1:429920‑M1/1‑119 (MQ=255)                                  cGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatg                                                                                                                       >  2:920780‑M1/1‑117 (MQ=255)                                    gACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                                    <  2:428206‑M1/151‑37 (MQ=255)                                     aCATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   <  2:44725‑M1/151‑38 (MQ=255)                                     aCATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   >  1:1206848‑M1/1‑114 (MQ=255)                                         aataaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                               <  2:366123‑M1/151‑42 (MQ=255)                                         aataaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtt                                                                                                               >  1:762346‑M1/1‑110 (MQ=255)                                           taaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                             >  2:824033‑M1/1‑108 (MQ=255)                                             aaGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           >  1:362170‑M1/1‑106 (MQ=255)                                              aGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           >  1:1174237‑M1/1‑105 (MQ=255)                                                 aaaCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                                        >  2:823924‑M1/1‑102 (MQ=255)                                                  aaCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                                                                      <  2:167696‑M1/151‑51 (MQ=255)                                                   aCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgc                                                                                                     <  1:349100‑M1/151‑52 (MQ=255)                                                   aCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg                                                                                                      >  1:847506‑M1/1‑100 (MQ=255)                                                     cTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                                   >  2:1181650‑M1/1‑98 (MQ=255)                                                         taccgccAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagt                                                                                               >  1:81263‑M1/4‑94 (MQ=255)                                                           aCGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtgg                                                                                             >  1:1064009‑M1/1‑92 (MQ=255)                                                             gCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                           <  1:603546‑M1/151‑62 (MQ=255)                                                              ccAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                          <  2:562089‑M1/151‑63 (MQ=255)                                                              ccAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                          <  1:433597‑M1/151‑63 (MQ=255)                                                               caaaacaaaaAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                                         >  1:433313‑M1/1‑88 (MQ=255)                                                                       aaaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                  >  2:533680‑M1/1‑80 (MQ=255)                                                                        aaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                                                <  2:881229‑M1/151‑73 (MQ=255)                                                                        aaaaATATTTCTTCGCGTTGTGTAAACGATCACTTATTATATTTCCACAAAATTTAATCTAGTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                                                <  2:742846‑M1/151‑73 (MQ=255)                                                                          aaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                               >  2:1004059‑M1/1‑77 (MQ=255)                                                                            gTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                                            >  1:1008113‑M1/1‑75 (MQ=255)                                                                            gTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagc                                                                            >  2:264152‑M1/1‑75 (MQ=255)                                                                             tATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                                                                           >  2:143984‑M1/1‑74 (MQ=255)                                                                             tATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagct                                                                           >  2:242964‑M1/1‑74 (MQ=255)                                                                                  cgtcgCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtc                                                                        <  1:1163899‑M1/149‑81 (MQ=255)                                                                                       cgTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                                 <  1:729639‑M1/151‑88 (MQ=255)                                                                                        gTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgt                                                                >  2:1164008‑M1/1‑63 (MQ=255)                                                                                           gtgtAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttca                                                             <  1:1200747‑M1/151‑92 (MQ=255)                                                                                           gtgtAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttc                                                              <  1:807899‑M1/150‑91 (MQ=255)                                                                                                 gCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctact                                                       <  2:172230‑M1/151‑98 (MQ=255)                                                                                                    aTCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                                    <  2:98152‑M1/151‑101 (MQ=255)                                                                                                         ttattaTATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggg                                                >  1:337197‑M1/1‑46 (MQ=255)                                                                                                          tattatATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg                                              >  2:77085‑M1/1‑45 (MQ=255)                                                                                                          tattatATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggt                                               <  1:256460‑M1/150‑106 (MQ=255)                                                                                                           attatATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtgg                                             >  2:465953‑M1/1‑44 (MQ=255)                                                                                                           attatATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtg                                              <  2:60157‑M1/150‑107 (MQ=255)                                                                                                             tataTTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggt                                            <  2:344135‑M1/150‑109 (MQ=255)                                                                                                              atatTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtg                                           <  1:51736‑M1/150‑110 (MQ=255)                                                                                                                   tCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgcatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaa                                      >  2:586285‑M1/1‑36 (MQ=255)                                                                                                                      acaAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                  <  2:997510‑M1/151‑119 (MQ=255)                                                                                                                                aTCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccg                        >  1:533936‑M1/1‑23 (MQ=255)                                                                                                                                 tCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgc                       >  2:495765‑M1/1‑22 (MQ=255)                                                                                                                                    aTTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                    <  2:475015‑M1/151‑133 (MQ=255)                                                                                                                                    aTTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                    <  1:161555‑M1/151‑133 (MQ=255)                                                                                                                                     tttACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                    >  1:815382‑M1/1‑18 (MQ=255)                                                                                                                                       tACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac                  >  1:611051‑M1/1‑16 (MQ=255)                                                                                                                                         cAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtctgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc               >  1:368296‑M1/1‑14 (MQ=255)                                                                                                                                          aGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc               >  2:99301‑M1/1‑13 (MQ=255)                                                                                                                                             ccTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg           >  1:1104218‑M1/1‑10 (MQ=255)                                                                                                                                             ccTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc            <  1:267482‑M1/150‑141 (MQ=255)                                                                                                                                             ccTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgcccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcg           <  2:924949‑M1/151‑142 (MQ=255)                                                                                                                                              cTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgc          >  2:1182079‑M1/1‑9 (MQ=255)                                                                                                                                                    gcgggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaacgcaccgccggacatccgcgctatct     >  1:324944‑M1/3‑3 (MQ=255)                                                                                                                                                     aGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct   >  1:500859‑M1/1‑2 (MQ=255)                                                                                                                                                      gggtgatgctgccaacgtactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctg  <  1:987957‑M1/151‑151 (MQ=255)                                                                                                                                                      |                                                                                                                                                       GGGTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGCTGTTATTTTCTGAAACTCTCAGAATAATTTCAAGATTATATATTAGCCATTTTGATGAGTAATTTAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAA  >  NC_000913/2798456‑2798755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.