New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2798605	0 (0.000)	79 (0.970)	68/298	0.3	100%	intergenic (‑110/‑559)	stpA/alaE	DNA binding protein, nucleoid‑associated/alanine exporter, alanine‑inducible, stress‑responsive
	?	NC_000913	3583428 =	NA (NA)					noncoding (1/768 nt)	IS1	repeat region

GTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGCTGTTATTTTCTGAAACTCTCAGAATAATTTCAAGATTATATATTAGCCATTTTGATGAGTAATTTAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAA  >  NC_000913/2798458‑2798755                                                                                                                                                    |                                                                                                                                                       gTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCgag                                                                                                                                                        >  2:466171/1‑148 (MQ=255) gTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggt                                                                                                                                                     <  2:315504‑M1/151‑4 (MQ=255) gTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggt                                                                                                                                                     <  1:822490‑M1/151‑4 (MQ=255)  tGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtg                                                                                                                                                    >  1:941094‑M1/1‑147 (MQ=255)   gCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtga                                                                                                                                                   <  1:674216‑M1/151‑6 (MQ=255)      aaTGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgc                                                                                                                                                >  2:932018‑M1/1‑143 (MQ=255)         gTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgc                                                                                                                                             >  2:1252641‑M1/1‑140 (MQ=255)         gTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgc                                                                                                                                             <  1:592115‑M1/151‑12 (MQ=255)                aaaCTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaactta                                                                                                                                      <  1:395426‑M1/151‑19 (MQ=255)                   cTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactg                                                                                                                                   >  1:1005690‑M1/1‑130 (MQ=255)                       gTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgattt                                                                                                                               >  1:90841‑M1/1‑126 (MQ=255)                           cATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtg                                                                                                                           <  2:789809‑M1/151‑30 (MQ=255)                            aTTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtg                                                                                                                           <  2:1229629‑M1/150‑30 (MQ=255)                               aCGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatg                                                                                                                       <  2:127086‑M1/151‑34 (MQ=255)                                  gACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                                    <  2:730193‑M1/151‑37 (MQ=255)                                  aacATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatg                                                                                                                    >  1:1095729‑M1/2‑115 (MQ=255)                                   aCATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   <  1:661952‑M1/151‑38 (MQ=255)                                   aCATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatgg                                                                                                                   <  2:305350‑M1/151‑38 (MQ=255)                                     ataataAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                                 <  1:163613‑M1/151‑40 (MQ=255)                                         taaAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttt                                                                                                             >  1:25666‑M1/1‑108 (MQ=255)                                           aaGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           >  1:862736‑M1/1‑106 (MQ=255)                                           aaGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           <  1:121050‑M1/151‑46 (MQ=255)                                            aGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttg                                                                                                           >  1:1197904‑M1/1‑105 (MQ=255)                                             gAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag                                                                                                         <  1:614424‑M1/151‑48 (MQ=255)                                              agaaccTTTTAACGACAAAACAAAAAAAGTATTTCTTCGCGTAGTGTAAGCGATCCCTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttactgtatgatggtgtttttgagg                                                                                                        <  2:922140‑M1/149‑49 (MQ=255)                                              aaaaCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgagg                                                                                                        >  1:1051994‑M1/1‑103 (MQ=255)                                               aaaCCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTCAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggt                                                                                                       >  2:372956‑M1/1‑102 (MQ=255)                                                  ccTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                    >  2:1086595‑M1/1‑99 (MQ=255)                                                  ccTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggagtttttgaggtgct                                                                                                    >  1:689929‑M1/1‑99 (MQ=255)                                                   cTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctc                                                                                                   >  1:738875‑M1/1‑98 (MQ=255)                                                     tttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                                  <  1:857629‑M1/150‑55 (MQ=255)                                                     tttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                                  >  2:796883‑M1/1‑96 (MQ=255)                                                     tttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcc                                                                                                  >  2:1018226‑M1/1‑96 (MQ=255)                                                      ttAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctcca                                                                                                 <  2:832660‑M1/150‑56 (MQ=255)                                                        aaCGCCAAAACAAAAAAAGTATTTCGTCGCATAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtg                                                                                              >  2:479452‑M1/1‑93 (MQ=255)                                                           gCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggct                                                                                           >  2:435214‑M1/1‑90 (MQ=255)                                                            ccAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                          >  2:67775‑M1/1‑89 (MQ=255)                                                            ccAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                          >  2:469157‑M1/1‑89 (MQ=255)                                                             caaaacaaaaACAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgcccacttactgatttagtgtatgatggtgtttttgaggtgctccagtggctt                                                                                          >  2:1158334‑M1/1‑88 (MQ=255)                                                             caaaacaaaaAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                                         >  2:260286‑M1/1‑88 (MQ=255)                                                              aaaacaaaaAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                        >  1:137871‑M1/1‑87 (MQ=255)                                                                aacaaaaAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                        >  1:177505‑M1/1‑85 (MQ=255)                                                                   aaaaaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgttt                                                                                    >  1:462941‑M1/1‑82 (MQ=255)                                                                    aaaaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                  >  1:279009‑M1/1‑81 (MQ=255)                                                                    aaaaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct                                                                                  <  2:296949‑M1/151‑71 (MQ=255)                                                                      aaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                                                <  1:271130‑M1/151‑73 (MQ=255)                                                                      aaaaGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctat                                                                                >  2:979354‑M1/1‑79 (MQ=255)                                                                         aGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                               >  2:897737‑M1/1‑76 (MQ=255)                                                                         aGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                               >  1:923849‑M1/1‑76 (MQ=255)                                                                             tttCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt                                                                         >  1:1013156‑M1/1‑72 (MQ=255)                                                                                   cgcgTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgcttttgaggtgctccagtggcttctgtttctatcagctgtccct                                                                     >  2:418298‑M1/1‑66 (MQ=255)                                                                                     cgTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctg                                                                 <  1:948325‑M1/151‑88 (MQ=255)                                                                                       tAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                               >  1:577825‑M1/1‑62 (MQ=255)                                                                                              aGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctac                                                        <  2:1145513‑M1/151‑97 (MQ=255)                                                                                              aGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagcta                                                         >  1:624104‑M1/1‑55 (MQ=255)                                                                                                 gATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                                      >  1:407621‑M1/1‑52 (MQ=255)                                                                                                  aTCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgac                                                    >  2:203596‑M1/1‑51 (MQ=255)                                                                                                   tCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtctgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacg                                                   >  2:744584‑M1/1‑50 (MQ=255)                                                                                                       ttattaTATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggg                                                >  2:1091337‑M1/1‑46 (MQ=255)                                                                                                             tatTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcg                                         >  1:624077‑M1/1‑40 (MQ=255)                                                                                                              atTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggagcg                                         >  2:335061‑M1/1‑39 (MQ=255)                                                                                                                ttCCACAAAATTTACTCTATTTACAGTCCCGCGCGAGggggatggtgccaacttactgatttagtgtatgttggagtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggcgcgta                                       >  2:833123‑M1/1‑37 (MQ=255)                                                                                                                 tCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac                                     >  1:205626‑M1/1‑36 (MQ=255)                                                                                                                    acaAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                  >  1:541785‑M1/1‑33 (MQ=255)                                                                                                                     caAAATTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggc                                  >  2:639508‑M1/1‑32 (MQ=255)                                                                                                                       aaaTTTAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaa                                >  1:974920‑M1/1‑30 (MQ=255)                                                                                                                            tAATCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcac                          >  1:68735‑M1/1‑25 (MQ=255)                                                                                                                              aTCTATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcacc                         >  1:1166149‑M1/1‑23 (MQ=255)                                                                                                                                 tATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg                     >  2:410218‑M1/1‑20 (MQ=255)                                                                                                                                 tATTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg                     >  2:791468‑M1/1‑20 (MQ=255)                                                                                                                                  aTTTACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccgg                    >  1:78483‑M1/1‑19 (MQ=255)                                                                                                                                    ttACAGTCCTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggac                  >  1:1255447‑M1/1‑17 (MQ=255)                                                                                                                                           ccTGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc            <  2:1073402‑M1/150‑141 (MQ=255)                                                                                                                                             tGCGCGAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct         >  1:204723‑M1/1‑8 (MQ=255)                                                                                                                                               cgcgAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctat       >  1:128257‑M1/1‑6 (MQ=255)                                                                                                                                               cgcgAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctat       <  1:913196‑M1/151‑146 (MQ=255)                                                                                                                                                gcgAGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc      <  2:278997‑M1/151‑147 (MQ=255)                                                                                                                                                gcgAGggtgatgctgccaacttacggatttagtgtatgatggtgtttttgaggggctccagtggcttctgtttctatcagatgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct         >  2:693799‑M1/1‑5 (MQ=255)                                                                                                                                                   aGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctct   <  1:1105153‑M1/151‑150 (MQ=255)                                                                                                                                                    gggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctg  <  2:25664‑M1/151‑151 (MQ=255)                                                                                                                                                    |                                                                                                                                                       GTGCGAATGTTATTTAAACTTTGTAACATTACGGACATAATAAAGAAAACCTTTTAACGCCAAAACAAAAAAAGTATTTCGTCGCGTAGTGTAAGCGATCACTTATTATATTTCCACAAAATTTAATCTATTTACAGTCCTGCGCGAGATTATTTCAGCTGTTATTTTCTGAAACTCTCAGAATAATTTCAAGATTATATATTAGCCATTTTGATGAGTAATTTAGATTATTGGTGAACAGAGCGGCGCTCTCTGCTCGCTAATTCCGCAAGCCTGACAAAATCAAAGTGAATAAAAA  >  NC_000913/2798458‑2798755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.