Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,594,132 (C)8→9 pseudogene (3856/3861 nt) yneO ← pseudogene, AidA homolog

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,594,1241.C93.0% 187.2 / 8.0 57pseudogene (2/1461 nt)yneOpseudogene, AidA homolog
Reads supporting (aligned to +/- strand):  ref base . (1/3);  new base C (25/28);  total (26/31)
Fisher's exact test for biased strand distribution p-value = 6.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.16e-01

CGTCGCGTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTCCCCCCCCACGAT  >  NC_000913/1593976‑1594261
                                                                                                                                                     |                                                                                                                                           
cGTCGCGTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑c‑c                                                                                                                                         >  1:426542/1‑151 (MQ=255)
cGTCGCGTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGGTGCCGCCGATAGTGGTTTTAGCGACACGCAGTT‑‑c‑c                                                                                                                                         >  2:1018840/1‑151 (MQ=255)
   cgcgTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑c‑cccc                                                                                                                                      <  2:1204862/151‑1 (MQ=255)
      gTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑c‑ccccccc                                                                                                                                   >  1:210589/1‑151 (MQ=255)
             gTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCAt                                                                                                                             <  2:845764/151‑1 (MQ=255)
               catcaGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATaa                                                                                                                           <  1:58937/151‑1 (MQ=255)
                atcaGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAAc                                                                                                                          >  2:18700/1‑151 (MQ=255)
                   aGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGt                                                                                                                        >  2:903994/1‑150 (MQ=255)
                             ttCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGATCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATc                                                                                                                 <  1:278434/147‑1 (MQ=255)
                              tCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCt                                                                                                             <  1:1179346/150‑1 (MQ=255)
                              tCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCt                                                                                                             <  1:249503/150‑1 (MQ=255)
                                  gTATAGTTGCCTTTAACGGTCAGTACATTCCCCGGTTTCCCCCCGTCGCTATTCATTTGAACCGTGCCGCCATTCTCCGGGTTGCCGCCGATAGTAGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAg                                                                                                         <  1:182302/150‑1 (MQ=255)
                                    ataGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAgtg                                                                                                       <  2:279636/150‑1 (MQ=255)
                                        ttGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTCCGCTATTAATTTGAACCGTGCCGCCTTTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGCCC‑CCCCCCCAGGCATAACGTTCATATCACCTGCAgtgg                                                                                                      <  2:788700/148‑1 (MQ=255)
                                          gCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAt                                                                                                >  1:91139/1‑151 (MQ=255)
                                          gCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAt                                                                                                >  1:472810/1‑151 (MQ=255)
                                          gCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACAt                                                                                                <  1:1076553/151‑1 (MQ=255)
                                             gTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAATGTTCATATCACCTGCAGTGGTGACAttt                                                                                              >  1:448936/1‑150 (MQ=255)
                                               tAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTc                                                                                             >  2:1184849/1‑149 (MQ=255)
                                                   ggTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGAc                                                                                        >  1:1047104/1‑150 (MQ=255)
                                                         tACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCacac                                                                                 >  2:587116/1‑151 (MQ=255)
                                                           cATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCg                                                                               <  1:402475/151‑1 (MQ=255)
                                                              tCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCt                                                                             <  2:467806/150‑1 (MQ=255)
                                                                  cGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGCGACATTTCCCGACATCACACCGCTGTTAt                                                                        >  1:182515/1‑151 (MQ=255)
                                                                   ggTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGGGACATTTCCCGCCATCACACCGCTGTTa                                                                         >  1:1090491/1‑149 (MQ=255)
                                                                        ccccccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGatat                                                                  <  1:356932/151‑1 (MQ=255)
                                                                        ccccccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGata                                                                   <  1:798182/150‑1 (MQ=255)
                                                                            ccTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAAtg                                                             <  2:232041/151‑1 (MQ=255)
                                                                                    aTTCATTTGAACCGTGCCGCCATTCTCCACGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGa                                                       <  2:670530/150‑1 (MQ=255)
                                                                                    aTTCATTTGAACCGTGCCGCCATTCACCAGGTAGGGGCCGAGAGTGGTTTTAGGGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAAtgtg                                                           <  1:799786/146‑1 (MQ=255)
                                                                                     ttCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACt                                                     >  2:12893/1‑151 (MQ=255)
                                                                                      tCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACtt                                                    >  1:168999/1‑151 (MQ=255)
                                                                                       cATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTg                                                   >  1:869200/1‑151 (MQ=255)
                                                                                        aTTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTg                                                   <  2:565560/150‑1 (MQ=255)
                                                                                            gAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCata                                              <  1:736967/151‑1 (MQ=255)
                                                                                            gAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCat                                               >  1:635464/1‑150 (MQ=255)
                                                                                             aaCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCatat                                             >  2:826023/1‑151 (MQ=255)
                                                                                              aCCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATAtt                                            >  2:380136/1‑151 (MQ=255)
                                                                                               ccGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGCGC‑C‑CCCCCCCAGGCATAACGTGCATATCACCTGCAGTGGAGACATTCCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCatat                                             >  1:160369/1‑149 (MQ=255)
                                                                                                   gccgccATTCTCCAGGTTGCCGCCGATAGGGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATg                                        <  2:677452/150‑1 (MQ=255)
                                                                                                     cgccATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCa                                     <  2:507909/151‑1 (MQ=255)
                                                                                                      gccATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCaga                                   <  1:756537/151‑1 (MQ=255)
                                                                                                       ccATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGc                                      >  1:195100/1‑148 (MQ=255)
                                                                                                        cATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCag                                    >  1:475645/1‑149 (MQ=255)
                                                                                                        cATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCag                                    >  1:302649/1‑149 (MQ=255)
                                                                                                         aTTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCagag                                  <  2:1107898/150‑1 (MQ=255)
                                                                                                         aTTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGt                                 >  2:924214/1‑151 (MQ=255)
                                                                                                           tctcCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTc                                <  2:1094940/150‑1 (MQ=255)
                                                                                                              ccAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGGCTTGCCATATTAATGGCAGAGTCg                               <  1:854191/148‑1 (MQ=255)
                                                                                                              ccAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCgg                              <  1:240971/149‑1 (MQ=255)
                                                                                                                aGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAAcc                          <  2:178695/151‑1 (MQ=255)
                                                                                                                 gtttGCCAGCGAGAGTAGTTTTAGCGACGCGAGATA‑‑CACGCCCCCAGGCATAACGTTCATGTCGCCTGCAATGGTGACATTTCCCGAGATCTGTTCGCTGTTATGGATATTAATGTGTTGACTGGCCGTATGGATGGCTGAGTCGTAACCg                         <  1:967295/149‑1 (MQ=255)
                                                                                                                 ggTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCg                         <  1:380123/151‑1 (MQ=255)
                                                                                                                   ttGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGaa                       >  1:589773/1‑150 (MQ=255)
                                                                                                                       cgccgATAGTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGc                    >  1:183166/1‑150 (MQ=255)
                                                                                                                               gTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTcccc           >  1:863891/1‑151 (MQ=255)
                                                                                                                               gTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTcccc           >  1:1127265/1‑151 (MQ=255)
                                                                                                                               gTGGTTTTAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTcc             <  1:1041769/149‑1 (MQ=255)
                                                                                                                                   ttttAGCGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTcccccccc       >  2:483863/1‑151 (MQ=255)
                                                                                                                                      tAGCGTCACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTCCCCCCCCAc     <  1:1145191/150‑1 (MQ=255)
                                                                                                                                         cGACACGCAGTGC‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTCCCCCCCCACGat  <  1:903939/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                           
CGTCGCGTTGAACGTCATCAGGCCATTGTTTCCGGTATAGTTGCCGTTAACGGTCAGTACATTCCCCGGTTTCCCCCCTTCGCTATTCATTTGAACCGTGCCGCCATTCTCCAGGTTGCCGCCGATAGTGGTTTTAGCGACACGCAGTG‑‑C‑CCCCCCCAGGCATAACGTTCATATCACCTGCAGTGGTGACATTTCCCGACATCACACCGCTGTTATGGATATTAATGTGTTGACTTGCCATATTAATGGCAGAGTCGGAACCGAAAGCAATTTCCCCCCCCACGAT  >  NC_000913/1593976‑1594261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑