| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 559,181 | 0 | G | A | 40.3% | 90.0 / 25.6 | 68 | E70K (GAA→AAA) | sfmC | putative periplasmic pilus chaperone |
| Reads supporting (aligned to +/- strand): ref base G (23/17); new base A (0/27); total (23/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.84e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAA > NC_000913/559034‑559329 | gcCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTaaaagaa > 1:133146/1‑150 (MQ=255) ccATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTaaaagaaa > 1:1183839/1‑149 (MQ=255) gcCGGAGGGATCGCAATAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGtcattc > 1:970977/1‑150 (MQ=255) ggAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATtcatca < 2:734014/151‑1 (MQ=255) gAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTcatcat < 1:187946/151‑1 (MQ=255) atggATGGCATTAGGTGCCACTAGTATTATTTATCCGGCTGATTCTAACCAGACTGCGGTGTGGATTAGATATTGCCATACCAATGGGCGAATTCTGGTCAATTCGTGGATTGGAACCATCGTCGGTGTAAAATAAATGCCATgcatca < 1:748315/147‑1 (MQ=255) aTCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTacac < 2:790226/151‑1 (MQ=255) cGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACAcc < 2:578709/150‑1 (MQ=255) cGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCg < 2:539664/151‑1 (MQ=255) cATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGcc < 2:610088/151‑1 (MQ=255) cACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACtgtttgtt > 1:944922/1‑151 (MQ=255) gtgTATTATTTACCCCGCTGATGCTAAACAGACGGCGGTATGGATTAAAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGGGGTGAAAAAAAAAAGTCATTCATCATTCCACCGCCACTGTTTGTTAGt < 1:1061412/149‑1 (MQ=255) cgTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTg > 2:281961/1‑151 (MQ=255) gTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTg > 2:760822/1‑150 (MQ=255) gTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTg > 2:393954/1‑150 (MQ=255) ttttgtttatCCCTCTGATTCTAAACACACTGCGTTTTGTATTAAAAATAGCCATACCAATGAGCGCTTTTTGTTCAGTTGGTGGATTAAAAACAGCCGGGGTGAAAAAGAAAAGCCCTCCATCATCACACCGCCACTGTTTGTTAGt < 1:1096502/143‑1 (MQ=255) tattatTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGa > 1:63223/1‑150 (MQ=255) ttttttacCCCGCTGATGCAAAACAGCCGGGGTTATGGATTAGAAATACCCATACCAATGAGCGTTTTCTGGTCAATTCGTGAATTAAAAACAGCAGCGGTTAAAAAAAAAATTCATTCATCATTACACCGCCACtgtttgtt < 1:957479/140‑1 (MQ=255) ttatttacCCCGCTGATGCTAAACGGCCTGCGGTATGGATAAAAAATAGCCATACAAAGGAGCGTTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATCCATCTTTACACCGCCACTGTTTGTTAGTg < 1:42742/147‑1 (MQ=255) tatttatCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAAccc > 1:625237/1‑151 (MQ=255) atCCCGCTGATGCAAAAAAAATTGCGGTATGAATTAGAAATAGCCATCCCAATGAGCGTTTTCTGGTAAATTCGTGTATTAAAAACGGCAGCGTTATAAAAAAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCaaaa < 1:570784/150‑1 (MQ=255) cccGCTGATGCAAAACATACGGCGGTATGAATAAAAAATAGCCATACAAATGAGCGCTTTCTGGTCATTTCGTGGATTAAAAACAGCAGGGGTGAAAAAAAAAAGTCATTCATAATTACACCGCCACTGTTTGTTAGTGAACCCaaaa < 1:634343/148‑1 (MQ=255) cccGCTGAGGCAAAACAGACTGCGGTATGGATTAGAAATAGCCATACAAATGAGCGTTTTCTGGTCAATTCGTGGATTAAAAACAGCAGCGGTGAAAAAAAAAAGTAATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCaaaa < 1:338582/148‑1 (MQ=255) cGCTGATGCTAAACAGACTGCGGTATGAATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGaa < 2:133392/151‑1 (MQ=255) gaaaaaCAGACTGCGTTATGGATAAAAAATAGCCATCCAAATGAGCTCTTCCGGGTAATTTCGTGTATTGAACACAGCAGCGTGGAAAAAAAAAAGAAATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACtt < 1:259265/148‑1 (MQ=255) acaaaacagctggCGGTATGGATTAAAAATCGCCATACAAAGGAGCTCTTTCTGGTCAATTCGTGGTTTGAAAACGGCGGGGGTGAAAAAAAAAAATCTTTCTTCATTACCCCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACt < 1:699635/138‑1 (MQ=255) aaagagatgggtgTATGATTTAAAAATAGCCATACCAATGGGCGTTTTCTGTTCATTTGGTGTATAAAAAACAGCAGCGATAAAAAAAAAAATTCATCCATAATTCCGCCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGc < 1:138512/139‑1 (MQ=255) aaaCAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGAAAAAAAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACt < 1:1198546/147‑1 (MQ=255) aaaCAGACGGGGGTATGGATTAAAAATAACCATACAAATGAGCGTTTTCGGGTAATTTCGTGGATTAAAAAGAGAAGCGGTTTAAAAGAAAAGTAATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACtt < 2:840219/148‑1 (MQ=255) aCAGACTGCGGTGTGGATTAGAAATCGCCATACCAATGAGTGCTTTTTGGTCATTTCGTGGATTAAAAACAGCAGCGGTTTAAAAAAAAAGTCATTCTTCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTg < 2:898516/148‑1 (MQ=255) aCAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGt > 1:1037620/1‑151 (MQ=255) ctgggttttGGATTAGAAATAGCAATACAAATGAGCACTTTCGGGTCATTTCGTGGATTAAAACCAGCGGGGTTGAAAAAAAAAATAAATAAACCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGtat < 1:146194/140‑1 (MQ=255) cggCGGTATGGATTAGAAATAGCCATACCCATGAGCGCTTTCTGGTCAATTCGTGGATTAAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGtatta < 2:670700/148‑1 (MQ=255) gggttATGGATTAAAAATAGCCATACCAATGAGCCCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTATAAAAAAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGta < 1:843609/141‑1 (MQ=255) gCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAAAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTattatt < 2:906455/150‑1 (MQ=255) gCGGTATGAATTAGAAATAGCCATACAAATGAGCGCTTTCTGGTAAATTCGTGGATTAAAAACAGCAGCGGTGAAAAAAAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGtattat < 1:1108343/149‑1 (MQ=255) tATGGATTAGAAATAGCCATGCAAATGAGCTCTTCCTTGTAAATTGGTGTATTGAAAACAGCAGGGGTGAAAAAAAAAGGTCATTCATCATAACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTaca < 2:1036734/150‑1 (MQ=255) aTGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACAcc > 2:765498/1‑151 (MQ=255) ggATTAGAAATAGCCATCCCAATGAGCGTTTTCTGGTCAATTCGTGGATTGAAAACACCAGCGGTGTAAAAAAAAATTCATTCATAATAACCCCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGtattat < 2:405651/142‑1 (MQ=255) tAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTcc > 1:989152/1‑150 (MQ=255) tAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTcc > 2:1141376/1‑150 (MQ=255) aaaaaTAGCAATACCAATGAGCGTTTTCTGGTCATTTCGTGGATTGAAAACAGCGGGGGTTAAAAAAAAAATTCATCCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTcc < 1:582279/147‑1 (MQ=255) cATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGgc > 1:674515/1‑149 (MQ=255) aCCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGgcagc > 2:235870/1‑149 (MQ=255) ccAATGAGCGTTTTCTGTTAATTTGGTGTTTTAAAACCAACAGGGGTAAAAAAAAAAGTTCTTCCACCTTTTCTCCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCt < 1:992827/142‑1 (MQ=255) aTGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGgcagc > 2:1198708/1‑145 (MQ=255) ttaGCGCTTTCGGTTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATCCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGcagcag > 1:81918/3‑146 (MQ=255) tGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGt > 2:79758/1‑151 (MQ=255) gagctttttCTGGTCATTTCTTGGATTGAAAACAGCAGCGGTGAAAAAGAAAAGTCATCCTTCTTTCCACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTg < 1:717964/145‑1 (MQ=255) gagctttttCTGGTAAATTCGTGGATTGAAAACAGCAGCGGTGAAAAAAAAAAGTCTTTCATCATTACGCCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCg < 2:848795/143‑1 (MQ=255) gAGCGCTTTCTGGTCAATTCGTGGATTAAAAACAGCAGCGGTATAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGt < 1:476905/150‑1 (MQ=255) gcgcTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATc > 2:301879/1‑146 (MQ=255) cgcTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGt > 1:586741/1‑151 (MQ=255) gttCAATTCGTGAATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTctct < 1:351672/145‑1 (MQ=255) gtaaaTTGGTGAATTGAAAACAGCGGGGGTGAAAAAAAAAATCCATCCATCTTTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGtt < 1:970628/146‑1 (MQ=255) atttCGTGGATTAAAACCAGCGGCGGTGAAAAAAAAAAGTCTTTCACCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTgg < 1:752529/148‑1 (MQ=255) ttCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATg > 2:822424/1‑151 (MQ=255) gTGGATTAAAAACAGCGGCGGTAAAAAAAAAAAGTCATCCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAAt < 1:661810/151‑1 (MQ=255) gaggtggAAAGCAGCAGGGGTGTAAAGGAAAAATGCTTAGATATCACGCCGCCACTGGTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTAGTTACACCGTTCCGCCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGaa < 1:1107015/143‑1 (MQ=255) ttaaaaaCAGCAGCGGTTAAAAAAAAAAGTCATCAATCATCACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATg < 2:323322/144‑1 (MQ=255) tGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTa > 1:1032712/1‑149 (MQ=255) aaaaCAGCAGGGGTGAAAAAAAAAAGTCATCCAGCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGAc < 1:966146/151‑1 (MQ=255) aaaaCAGAAGGGGTGAAAAAAAAAAGTCATTATAAATCACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGa < 1:724975/150‑1 (MQ=255) aCAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGAt > 2:161438/1‑151 (MQ=255) cagcagCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATc > 1:504685/1‑151 (MQ=255) agcGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCtt > 2:7123/1‑151 (MQ=255) gcGGTGAAAAAGAAAATTCATCCATCATTCCACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGa < 1:466887/144‑1 (MQ=255) ctttttcccagaaaagTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCg > 2:525775/10‑151 (MQ=255) ggTATAAAAAAAAAGTAATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCg < 1:232242/150‑1 (MQ=255) ggTATAAAAAAAAACAAATCCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCg < 1:77807/150‑1 (MQ=255) gtgtAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGt < 2:657042/151‑1 (MQ=255) aaaaaaaaagCCATCCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGAt < 1:618350/151‑1 (MQ=255) aagaaaagTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATaa < 2:49222/151‑1 (MQ=255) agaaaagTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATaa > 2:1181211/1‑150 (MQ=255) | GCCCATGCTGCCGGAGGGATCGCATTAGGTGCCACGCGTATTATTTATCCCGCTGATGCTAAACAGACTGCGGTATGGATTAGAAATAGCCATACCAATGAGCGCTTTCTGGTCAATTCGTGGATTGAAAACAGCAGCGGTGTAAAAGAAAAGTCATTCATCATTACACCGCCACTGTTTGTTAGTGAACCCAAAAGCGAAAATACTTTGCGTATTATTTACACCGGTCCACCGCTGGCAGCAGATCGTGAGTCTCTGTTCTGGATGAATGTTAAGACGATCCCTTCGGTAGATAA > NC_000913/559034‑559329 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |