| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 42.0% | 111.3 / 18.1 | 69 | V288G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (4/36); new base G (29/0); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.73e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAC > NC_000913/599429‑599724 | cGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGggtggt < 1:292810/151‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGa < 2:976262/149‑1 (MQ=255) cgacgaCTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGAGCCCGTTTATCTGCGCGATGATGCGAAGGCCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGGAGTGGC‑GGGCGTGGGAGTGAt > 2:1050812/1‑150 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGgggggggggatctgcgggc > 1:776699/1‑138 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTGCTGC‑GGTc > 2:29236/1‑151 (MQ=255) aaTCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGGATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑Gggggggggggggggccttgcagcc > 1:1159682/1‑136 (MQ=255) aaTCACATCGTTTAAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATcc < 1:105737/150‑1 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGGTCCTGC‑GGTCCgg > 1:157980/1‑149 (MQ=255) acaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTCCTGC‑GGTcccg > 1:165921/1‑146 (MQ=255) caTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCaa > 2:1038546/1‑150 (MQ=255) tAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGccc < 1:809044/150‑1 (MQ=255) aaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGGTCCTGCGGACCCGGCAAAACCCCCCgg > 2:719323/1‑149 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGaa < 2:1168770/151‑1 (MQ=255) aGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTCCTGC‑GATCCGGCaaaaaacgcc > 1:897317/1‑141 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑g < 1:1087557/150‑1 (MQ=255) cAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTg < 2:967158/151‑1 (MQ=255) aGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGa < 2:619012/151‑1 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGAt < 2:251851/151‑1 (MQ=255) gAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATcg < 2:604762/151‑1 (MQ=255) aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGGCCTGC‑GATCCGGCCAAAACGCCCGAGAA‑GGGGTcgcc > 1:358824/1‑151 (MQ=255) tGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGGTCCCGC‑GGTTCCGCGAAAAAGCCCCGGAA‑GGGGGcgccggc > 1:400403/1‑149 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATACTGC‑GGTTCGGCGAAAACGCCCGAGAA‑GTGATcgccgc > 2:238753/1‑143 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATGCCTC‑GGGACGGCCAAAACGCCCGGGAA‑GCGATGGCCGCCGGGAAg > 2:1027429/1‑149 (MQ=255) ccGTTTATCGGCGCGAGGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGa < 1:755971/151‑1 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTCCTGC‑GGACCGGCAAAAACGCCCGAGAA‑GAGGTCGccgccgcggag > 1:315045/1‑143 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑aa < 1:409589/150‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑aa < 1:853747/150‑1 (MQ=255) ttATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAGCCCGAGAA‑GGGATCGCCGCCGTGAAGGAC‑aa > 2:1147452/1‑150 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGATCCTGC‑GATCCGGCCAAAACGCCCCGGAA‑GGGGTCGCCCCCGTGAAGGAC‑aaa > 2:154456/1‑149 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAAc < 1:872878/150‑1 (MQ=255) aTCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GAACCGGCAAAAACGCCCGGGAA‑GTGATCGCCGCCGTGAAGGAC‑aa > 2:1063985/1‑148 (MQ=255) cTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAGCCCGGGAA‑GGGATCGCCGCCGGGAAGGAC‑AAAATgg > 2:252922/1‑151 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACt < 2:314266/147‑1 (MQ=255) ggtGTTGCGAAGGGACAGAGTGGCCCGGGGATGCGCCGGGGGGTGGCCGAGCGAAACGGCGAAGGCGAAGCGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGAAAAACCGCCCGAGAG‑GGGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGc < 1:1196948/149‑1 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTg < 2:328031/150‑1 (MQ=255) gTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTCCTGC‑GATTCGGCAAAAACACCCGGGGA‑GTGAGCGCCGCCGGAAAGGGG‑AAAcacgaagcacgcg > 1:1196683/1‑139 (MQ=255) tGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GAGCCGGCGAAAACGCCCCAGAA‑GAGATCGCCGCCGGGAAGGGC‑AAACTGGAAACGCGGaa > 1:500340/1‑150 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGCGGGGGGGGGGGGGGATCC‑CC‑GATCCGGCAAAAAACCCCCAGAA‑GGGAGTGCCGCCGGCAAAGAA‑AAACAAGaaaacccggaa > 1:702348/1‑141 (MQ=255) aGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAagtag < 2:590894/151‑1 (MQ=255) cAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGGTCCTGC‑GATCCGGCAAAAAAGCCCGAGAA‑GGGATCGCCGCCGCGAAGGAA‑AAACTGGAAAAGCCGAAAAGTAGTCt > 1:804281/1‑149 (MQ=255) aGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGAACCTGC‑GGTCCGGCAAAAACGCCCGAGAA‑GGGAACGCCGCCGTGAAAGAC‑AAACTGGAAACGCTGGAAagtagt > 2:71619/1‑146 (MQ=255) gATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGAAGTCTGcc > 2:57812/1‑150 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGAGCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GGGATTGCCGCCGGGAAGGAC‑AAACTGGAAACGCTGAAAAGAAATCTGCCgg > 2:482031/1‑151 (MQ=255) aTTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCAAAGTGGC‑GGGGGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAACCCCCGAA‑GTGAACGCCGCCCGGAAGGAC‑AAACTGGAAAAGCTGAAAAGCAGGCTGcc > 2:1052830/1‑149 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGa < 2:181286/150‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg < 2:48729/151‑1 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGTGGACCTGC‑GATCCCGCCAAAACCCCCGCGGA‑AGGAACGCCGCCGGGGAGGGC‑CAACAGGAAACTCTGAAAAGTAGTcacc > 1:1161035/1‑140 (MQ=255) cccGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCAAAAAAGCCCGGGGA‑GTGATCGCCGCCGGGGAGGAC‑AAAATGGAAACGCTGAAAAAGAGGCTGCCGGGAgg > 1:851529/1‑150 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTgg < 2:321264/151‑1 (MQ=255) gagaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGA‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAGCGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGGCTGCCGGAAg < 1:384589/145‑1 (MQ=255) gaTGCGCCGGGGCACTGCCGAACTAAACGGCGAAGGAGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGgag < 1:406669/151‑1 (MQ=255) aTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGGGGGGATCCTGC‑GATCCGGCCAAAAAGCCCGAGAA‑GGGATTGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGAAGTCTGCCGGGAGGCgggg > 2:1184600/1‑148 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGGGGGGGGGGGGGGCTGC‑GATCCCGCCAAAAAGCCCCGGAAGGGGAGCCCCGCCG‑GAAGGGCAAAATTGGAAAGGC‑GGCAAGGAGGCTGCCGGAAGGCgggggg > 1:309295/1‑144 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGt < 2:135737/151‑1 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGt < 2:759230/151‑1 (MQ=255) ccGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGtt < 1:1065460/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt < 2:930537/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt < 1:842402/151‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATAc < 1:143059/150‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATAc < 1:1129339/150‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACg < 2:711419/151‑1 (MQ=255) aaggcgaagTGGC‑GGGCGGGGTGGGGACCCTGC‑GATCCCGCAAAAACGCCCGAGAA‑GGGATCGCCGCCGCGGAGGGC‑AAACTGGAAACGCCGAAAAGAAGTCTGGCCGGAGGCGGGGGGATAGATTCAAAAAACGacagca > 1:1110951/1‑136 (MQ=255) aggcgaagTGGC‑GGGCGGGGGGGGGGTCCTGC‑GATCCGGCCAAAAAGCCCGAGAA‑GGGATCGCCGGCGGGAAGGAA‑AAACTGGAAACGCTGAAAAGTAGGCTGCCGGAAGGCGTGGAGGTAGTTATAACATAAGATCGCAGCCAGCTCaat > 1:771692/1‑149 (MQ=255) gaagTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAca < 1:29232/151‑2 (MQ=255) gaagTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGAc < 1:489377/150‑1 (MQ=255) aagTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACcg < 1:1050748/151‑1 (MQ=255) gc‑gggcggGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCa < 1:416083/151‑1 (MQ=255) gggcgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAC‑GTGATCGCCGCCGCGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATc > 2:91152/1‑151 (MQ=255) cgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc < 2:1132781/151‑1 (MQ=255) cgggGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 1:955892/1‑151 (MQ=255) ggggTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 1:113280/1‑150 (MQ=255) gggTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACaa < 2:1090594/151‑1 (MQ=255) gtgttgATCCTGC‑GATCCGGCAAAAACGACCGAGAA‑GTGATCGCCGCCGTGCAGGAC‑AATCTGGAAAGGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGCTCGCAGCCAGCTCATTGACCGCGCCATCGACAAc > 1:1034081/1‑150 (MQ=255) | CGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGGC‑GGGCGGGGTGGTGATCCTGC‑GATCCGGCAAAAACGCCCGAGAA‑GTGATCGCCGCCGTGAAGGAC‑AAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGACAAC > NC_000913/599429‑599724 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |