| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 5,159 | 0 | G | A | 39.5% | 92.0 / 50.0 | 77 | intergenic (+139/‑75) | thrC/yaaX | L‑threonine synthase/DUF2502 family putative periplasmic protein |
| Reads supporting (aligned to +/- strand): ref base G (41/5); new base A (0/30); total (41/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGA > NC_000913/5009‑5307 | aaTCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGg‑ag < 2:416890/151‑1 (MQ=255) atcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAAt > 1:950295/1‑150 (MQ=255) tcaGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATa > 2:600316/1‑150 (MQ=255) aGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTACCTTAGAGATTAGGATTGCGG‑AGAATaa < 2:709201/149‑1 (MQ=255) gTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATaac‑a > 1:1103269/1‑150 (MQ=255) aaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑ccg < 2:435664/151‑1 (MQ=255) aaaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑cc > 2:1219026/1‑150 (MQ=255) aaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑ccgc > 1:143988/1‑151 (MQ=255) aaTCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑ccgc > 1:936209/1‑151 (MQ=255) aTTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑ccgcc < 1:530734/147‑1 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTtctc > 2:750092/1‑150 (MQ=255) cATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTtctc > 2:562460/1‑150 (MQ=255) tATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATc > 1:135554/1‑150 (MQ=255) tcAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGt > 2:1095974/1‑150 (MQ=255) aTCAGGCCGGGTTTGTTTTTATGCACCCGGTTTTTTTTAAAAAAAAATTATGGAA‑AAAAATAACAGGAAAAAA‑GGAAAAATTCTC‑AAAAAATGCGGTAACTTAGATATTAGGTTTGCGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAAt < 2:781090/150‑1 (MQ=255) tCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGAGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAAtct > 1:923392/1‑151 (MQ=255) cAGGCCGTTTTTTTTTTTACCCGGCCCGTTTTTTTAAGAAAAAAATTGGGGAA‑AAAAATGACAGGAAAAAA‑GAAAAATTTCAA‑AATAAAGGCTTTAACTTAGAAATTAGGATGGGAG‑AAAATAAC‑AA‑CCGCCGTTCTCATCGAGTAAtctc < 1:473426/151‑1 (MQ=255) cAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAAtctc > 2:519731/1‑151 (MQ=255) aGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTa > 1:592917/1‑145 (MQ=255) ggCGGGTTTTGTTTTTAGCCACCCCGGTTTTTTTAGAAAAAAATTAGGGAA‑AAAAATGA‑AGGAAAAAAGGGAAAAATCCAA‑AATAAATGGGTTAATTTAGAGATAGGGATTGCGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTa < 2:592934/144‑1 (MQ=255) ggCCGGTTTTGCTTTTATGCAGCCCGTTTTTTTTAAAAAAAAATTAGGGAA‑AAAAAGGAAAGGAAAAAA‑GGAAAAATTCTC‑AAAAAATGCGGTAACTAAGAGATTAGGATTGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAAtct < 2:407603/148‑1 (MQ=255) gggttttGTTTTTATGCAGCCCGGTTTTTTTATGAAAAAATTAGGAAA‑AAAAATGACGGGAAAAAA‑GAAAAAATTCTA‑AAAAAGGGGGTTATCTTAAGAATGGGGATGGGGA‑AGAATAAA‑AA‑CCGCCGTTCTCATCGAGTAATCTCCgg < 1:426974/145‑1 (MQ=255) gggttttGCTTTTAGGCACCCCGTTTTTTTTATAAAAAATTTAGGGAA‑AAAAATGAAAGGAAAAAA‑GGAAAAATTCTC‑AATAAATGCGGTAATTTAGAAATTAGGATGGCGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGat < 1:1087142/147‑1 (MQ=255) cGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGat > 2:82040/1‑151 (MQ=255) ggTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGatat > 2:195721/1‑151 (MQ=255) tttttttttATGCACCCCGTTTTTTTTAGAAAAAAATTAGGAAA‑AAAAATGACAGAAAAAAA‑GGAAAAATTCAA‑AAAAAATGGGATAATTTAGAAATTGGGTTGGGGG‑AAAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGatat < 2:526032/144‑1 (MQ=255) tttGCTTTTATGCAGCCCGGCTTTTTTATGAAGCAATTATGGAG‑AAAACTGACAGGGAAAAC‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CTGCCGTTCTCATCGAGTAATCTCCGGATATCg > 1:159802/1‑151 (MQ=255) ttGTTTTTTTGCAGCCGGATTTTTTTAGGAAAAAATATTGGAA‑AAAAAGGATGGGAAAAAA‑GGA‑AAATTTTCAAATAAAGCCGTAAACTAAGAGGTTAGGAGGGGGG‑AAAATAAC‑CG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCg < 2:344631/150‑1 (MQ=255) ttGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCg > 2:84216/1‑150 (MQ=255) gCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAcc > 2:236152/1‑151 (MQ=255) tttATGCAGCCCGTTTTTTTTAAAAAAAAATTATGGAA‑AAAAATGAAAGGAAAAAA‑GAAAAAATCCAA‑AAAAAATGCGTTACTTAAGATATAAGGTTTGGGG‑AAAAAAAC‑AG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGAc < 1:300369/147‑1 (MQ=255) tttATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCa > 1:1170052/1‑150 (MQ=255) tATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATa > 2:939796/1‑150 (MQ=255) aggccgCCGGGTTTTTTAAAAAAAAAATGATGGAA‑AAAAAGAAAAGGAAAAAA‑GAAAAATTTCCA‑AATAAATGCGGTAATTTAGAAATTAGGTTTGCGG‑AAAAAACC‑AA‑CCGCCGTTCTCATCTAGTAATCTCCGGATATCGACCCATAAc < 1:74861/146‑1 (MQ=255) gccgccccGGTTTTTTTATGAAAAAATTATGGAA‑AAAAATAACGGGAAAAAA‑GGAGAATTCCTA‑AAAAACTGGGGAAATTAAGGGTGGAGATGGGGGG‑AGAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACg < 2:592356/146‑1 (MQ=255) cccgttttttttATAAAAAATTTAGGGAA‑AAAAATGACAGGAAAAAA‑GGAGAAATTCTA‑AATAAATGGGTAAATTTAAAAATAAGGTTGGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGc < 2:1120901/143‑1 (MQ=255) cccGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCa > 2:74219/1‑150 (MQ=255) ccctgttttttAAAAAAAAAATAAGGAAAAAAAAGGAAAGAAAAAAA‑GAAAAAATTCTA‑AAAAAATGCGATAATTTAGAAATTAGGATTGGGA‑AAAAAAAA‑AG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCa < 1:658213/145‑1 (MQ=255) ggtttttttAAAAAAAAATTAGGAAA‑AAAAAGGACAGGAAAAAG‑GAAAAAATTCAA‑AAAAAATGCGGTAATTTAGAGATTGGGTTGGCGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGa < 1:1199939/148‑1 (MQ=255) aattaatgaaaaaaaaGGACAGAAAAAAA‑GGAAAAATTCTA‑AAAAAAGGGGTTAATTAAGAGATGAGGATGGGGG‑A‑AAAAAC‑AACCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCt < 1:398745/140‑1 (MQ=255) aaTTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 1:176675/1‑151 (MQ=255) aaTTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 2:68572/1‑151 (MQ=255) aaTTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtg > 2:494773/1‑151 (MQ=255) ttATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtgtg > 1:1023394/1‑151 (MQ=255) gag‑aAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGaaaa > 1:850862/1‑150 (MQ=255) gaaaaaaaaTGAAAGGAAAAAG‑GAAAAAATTCAA‑AAAAAAGGCGGAATTTAAGAAATTA‑GATTGGGGAAAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCtgtg < 1:452393/143‑1 (MQ=255) gaaaaaaaaGGAAAGGAAAAAA‑GGAAAAATTCTA‑AAAAAAGGGGGTAACTTAGATTTTAGGATTGCGA‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGa < 1:303507/144‑1 (MQ=255) aaaagagagaaaaaaa‑GGAAAAATTCTA‑AAAAAAGGGGGTAATTTAGAGATTAGGTTTGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGc < 2:1061715/140‑1 (MQ=255) aaaTGAGGGGAAAAAG‑GGAAAATTTCAA‑AAAAAATGCGTAATCTAAGAAATTAGTATGGGGA‑AAAAAAAC‑AG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGc < 2:234417/151‑1 (MQ=255) aaggaaaggaaaaaa‑ggaaaaaTTCAA‑AAAAAATGCGTTAACTAAGAGATTAGGATTGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCa < 2:686359/145‑1 (MQ=255) aaaaaCAGGAAAAAA‑GGAAAAATTCAA‑AAAAATGGCGGAAACTGAGAGTTTAGGATGGGGA‑AAAAAAAA‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATgaa < 2:1103335/147‑3 (MQ=255) ataaaaGGAAAAAA‑GAAAAAATTCTA‑AAAAAAGGCGGTAATTTAGAGATTAGGATGGGGA‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCaa < 2:1041196/146‑1 (MQ=255) ggaaaaaa‑GGAAAAATTCAA‑AAAAAAGGCGATAACTAAGAGATTAGGATGGCGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTa < 2:809433/146‑1 (MQ=255) gAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt > 1:664692/1‑151 (MQ=255) aaaaaa‑GGAAAAATTCTA‑AAAAAAGGCGGTAACTTAGAGATAAGGATGGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGt < 2:143994/150‑1 (MQ=255) aa‑GGAAAAATTCTA‑AAAAAATGCGGTAATTAAGAGATTGGGATTGGGG‑AAAAAACC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTc < 2:472912/151‑1 (MQ=255) aaaaaTTCTA‑AAAAAAGGGGTTAACTTAGAGATTAGGTTTGGGG‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGc < 1:609469/147‑1 (MQ=255) gaAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACt > 1:818467/1‑151 (MQ=255) taaaaaaaGGCGGAAATTAAGAAATTGGGATGGGGA‑AAAAAAAA‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTcc < 1:689757/143‑1 (MQ=255) aTAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 2:405747/1‑151 (MQ=255) aTAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGtt > 2:608897/1‑151 (MQ=255) aTAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGt > 1:1171886/1‑150 (MQ=255) aaaTGCGGAAAGTAAGA‑AATAGGAATGGGG‑AAAAAAACAAA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCt < 1:936058/151‑1 (MQ=255) aaTGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTg > 1:640778/1‑151 (MQ=255) gggaaaattaaaggaTGAGTATGGCGG‑AAAAAAAC‑AG‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTg < 1:737209/135‑1 (MQ=255) gcttaaagtaagagATT‑GGAATGGGG‑AAAAAAAA‑AAGCCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTc < 2:1208732/141‑1 (MQ=255) gCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTc > 2:1218336/1‑151 (MQ=255) ggTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGc > 2:20646/1‑151 (MQ=255) aaCTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTcc > 2:585722/1‑151 (MQ=255) aCTTAGTGATTAGGATTGCGG‑AGAATAAC‑AA‑CTGCCGTTCTCATCGAGTAATTTCCGGATATCGACCCATAACGGGCAATGATAAAACGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCGTGGTTCTGGTCGCTc > 1:14245/1‑149 (MQ=255) ttAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCAt > 1:343785/1‑151 (MQ=255) taagatATTGGGATGGGGA‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCg < 2:1063203/142‑1 (MQ=255) tAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGcac > 2:461839/1‑151 (MQ=255) tGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTg > 2:633790/1‑151 (MQ=255) gggg‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTGTCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGc < 2:762209/149‑1 (MQ=255) gg‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg > 1:31546/1‑151 (MQ=255) gg‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTATGGTCGCTCCCATGGCAGCACAGGCTGCgg > 2:690120/1‑151 (MQ=255) gg‑AAAAAAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCgg < 2:224328/151‑1 (MQ=255) agaATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGa > 1:1127758/1‑150 (MQ=255) | AATCATCAGTAAAATCTATTCATTATCTCAATCAGGCCGGGTTTGCTTTTATGCAGCCCGGCTTTTTTATGAAGAAATTATGGAG‑AAAAATGACAGGGAAAAA‑GGAGAAATTCTC‑AATAAATGCGGTAACTTAGAGATTAGGATTGCGG‑AGAATAAC‑AA‑CCGCCGTTCTCATCGAGTAATCTCCGGATATCGACCCATAACGGGCAATGATAAAAGGAGTAACCTGTGAAAAAGATGCAATCTATCGTACTCGCACTTTCCCTGGTTCTGGTCGCTCCCATGGCAGCACAGGCTGCGGA > NC_000913/5009‑5307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |