| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,641,252 | T→C | intergenic (‑667/+87) | essQ ← / ← cspB | Qin prophage; putative S lysis protein/Qin prophage; cold shock protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,641,252 | 0 | T | C | 98.5% | 268.0 / ‑4.0 | 68 | intergenic (‑667/+87) | essQ/cspB | Qin prophage; putative S lysis protein/Qin prophage; cold shock protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (34/33); total (35/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.39e-01 | |||||||||||
TGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATTAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCTATAGAGA > NC_000913/1641106‑1641397 | tgccatgccaGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCaa > 2:1133982/1‑149 (MQ=255) catgccaGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTTCTTTTTATCAAAgaga < 2:1201501/151‑1 (MQ=255) catgccaGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAag > 2:228661/1‑148 (MQ=255) gccaGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATcc < 2:1030887/151‑1 (MQ=255) ccaGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCa < 2:332556/151‑1 (MQ=255) agcagTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAat < 2:104507/151‑1 (MQ=255) agcagTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAat < 2:615460/151‑1 (MQ=255) gcagTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAat > 1:568282/1‑150 (MQ=255) agTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATAtt > 1:84585/1‑151 (MQ=255) ttAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAat > 2:730802/1‑146 (MQ=255) ttAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAat < 1:730777/146‑1 (MQ=255) aGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCac < 1:339318/150‑1 (MQ=255) aGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCa < 2:390654/149‑1 (MQ=255) ttCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCactact > 2:603951/1‑151 (MQ=255) gctgTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGGCCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTActct < 2:1090650/149‑1 (MQ=255) gctgTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGt > 2:1213498/1‑151 (MQ=255) tgTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTcc > 2:618273/1‑151 (MQ=255) aTTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTAtctc < 1:1146130/149‑1 (MQ=255) aTTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATctct > 2:473223/1‑150 (MQ=255) aTGCAGCAAACCTGCACTTCTCCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTCACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCa < 2:894992/151‑1 (MQ=255) gcagcaAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAgg > 2:1218329/1‑151 (MQ=255) caAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATc > 2:1122669/1‑151 (MQ=255) aaaCCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCa < 2:225429/151‑1 (MQ=255) tGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCctt > 2:501888/1‑151 (MQ=255) tGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCctt > 2:1192096/1‑151 (MQ=255) gCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCct < 1:855754/149‑1 (MQ=255) cTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCttcttc > 2:148625/1‑151 (MQ=255) caccacAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGtt < 2:628646/151‑1 (MQ=255) accacAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGtt > 2:260677/1‑150 (MQ=255) ccacAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTAt > 2:446702/1‑151 (MQ=255) ccacAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTAt < 1:832195/151‑1 (MQ=255) acaATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCg > 2:158644/1‑151 (MQ=255) aTGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGtat > 2:300434/1‑151 (MQ=255) gTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATAc > 2:424231/1‑150 (MQ=255) aGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGa < 2:773704/150‑1 (MQ=255) gCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACg > 2:379819/1‑151 (MQ=255) aTACTTTTCCTGATTAAGATTTTGCCAAATGTGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGCCATCAGCCTTCTACGTTATCGTATACAGACGAg < 1:643357/151‑1 (MQ=255) aTACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAg < 2:322598/151‑1 (MQ=255) aCTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCg < 2:412134/151‑1 (MQ=255) tCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGa < 2:1035020/150‑1 (MQ=255) gATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAAttt < 1:390227/150‑1 (MQ=255) gATTAAGATTTTGCCAAATATGCTAGCCATGGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAAtttt < 2:682151/151‑1 (MQ=255) aGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATc > 1:316542/1‑150 (MQ=255) gATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATc > 1:694032/1‑149 (MQ=255) aTTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGGATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGt < 1:459580/151‑1 (MQ=255) tttGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTa < 2:1036583/150‑1 (MQ=255) ttGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAat > 1:1083442/1‑151 (MQ=255) gCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAatg > 2:355377/1‑150 (MQ=255) gCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAatg < 1:117156/150‑1 (MQ=255) gCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAatg < 2:1009847/150‑1 (MQ=255) cAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAatgatg < 1:276956/151‑1 (MQ=255) aaaTATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAatgatg > 2:625479/1‑150 (MQ=255) aaTATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGAc < 1:326365/151‑1 (MQ=255) tGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACAttt > 1:320659/1‑151 (MQ=255) ttGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTtgctgctgc > 1:216706/1‑150 (MQ=255) tGTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTtgctgctgc > 1:66582/1‑149 (MQ=255) gTTTCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAgg > 2:772779/1‑151 (MQ=255) tttCATGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAgg > 2:2522/1‑150 (MQ=255) aTGTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCtt < 2:572080/151‑1 (MQ=255) gTATTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCttt < 2:96558/150‑1 (MQ=255) aTTGGACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGc > 2:795322/1‑151 (MQ=255) ggACCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGcacc > 2:375371/1‑151 (MQ=255) aCCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGcaccac < 1:935160/151‑1 (MQ=255) aCCTCCTTACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGcaccac > 2:1205754/1‑151 (MQ=255) tcctTACTTTTTATTAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCActct > 2:387266/1‑151 (MQ=255) tACTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCta < 1:1213431/150‑1 (MQ=255) aCTTTTTATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCtata < 1:505390/151‑1 (MQ=255) tttttATCAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCtat > 1:1016565/1‑148 (MQ=255) ttatcaAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCTATAgaga < 1:20089/150‑1 (MQ=255) tatcaAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCTATAgaga > 2:351868/1‑149 (MQ=255) | TGCCATGCCAGCAGTTAGCTTCTGCTGTAAAACTATTCATGCAGCAAACCTGCACTTCACCACAATGGTTAGCATACTTTTCCTGATTAAGATTTTGCCAAATATGCTAGCCATTGTTTCATGTATTGGACCTCCTTACTTTTTATTAAAGAGATCCAATATTCACTACTCTGTCCGTATCTCTACTCAGGCATCAGCCTTCTTCGTTATCGTATACAGACGAGCGATGAATTTTAATCAGTAATGATGACATTTGCTGCTGCAGGACCTTTAGCACCACTCTCTATAGAGA > NC_000913/1641106‑1641397 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |