| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 599,576 | 0 | T | G | 43.7% | 98.6 / 23.9 | 72 | V288G (GTG→GGG) | cusA | copper/silver efflux system, membrane component |
| Reads supporting (aligned to +/- strand): ref base T (7/33); new base G (31/0); total (39/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAC > NC_000913/599429‑599721 | cGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGggtggt < 2:310696/151‑1 (MQ=255) gCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGgtggtg < 2:52041/151‑1 (MQ=255) gacTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGc < 1:875800/151‑1 (MQ=255) tttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGggggggggggg > 1:388517/1‑139 (MQ=255) ttAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGGGATCCTGCGG‑Tc > 2:214917/1‑151 (MQ=255) cacaTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCa < 1:894122/151‑1 (MQ=255) caTCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTTCTGCGA‑TTCGGGaa > 2:293222/1‑150 (MQ=255) ttttAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTCCTTCGA‑TCCCGCaaaaa > 1:81716/1‑148 (MQ=255) aaaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTACTTCGATTCCGCCAAAAAGGccg > 2:684081/1‑149 (MQ=255) aaaGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCTGCGA‑TCCGGCAAAAACGccc > 2:368397/1‑148 (MQ=255) gCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGGTCCCTGG‑GCCGGCAAAAACGccc > 1:248414/1‑145 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGt < 2:480233/151‑1 (MQ=255) ccAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCCGCGG‑GCCCGCCAAAAAGCCCGGGAAg > 2:143263/1‑150 (MQ=255) gTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGAt < 1:60382/151‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGGGGTCCTGCGG‑TCCGGCAAAAAACCCCGAGAAGGGGTcg > 1:448485/1‑150 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATcgc < 1:656212/151‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATcgc < 2:1142750/151‑1 (MQ=255) aaaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTACTTTGG‑TCCGGCAAAAAAGccc > 2:954378/1‑138 (MQ=255) aaaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGTGAGTCCGGGT‑TCCCGCAAAAAAGcccccggaagggtgggc > 1:810715/1‑137 (MQ=255) aaTGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATcgccg < 1:151787/151‑1 (MQ=255) ggCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTTCTGCGA‑TCCGGCAAAAAAGCCCGAGAAGGGGTCgccgcc > 1:532335/1‑150 (MQ=255) gCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGt < 1:727824/151‑1 (MQ=255) gTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGGTCCGCGA‑ACCGGGAAAAAAACCCGGGAAGGGGGCGccgccggg > 1:92266/1‑148 (MQ=255) tGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTCCCGCGG‑TCCGGCAAAAAAGCCCGCGAAGGGATcggcgc > 1:1253337/1‑145 (MQ=255) tGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGGGATCgccgcc > 2:747094/1‑146 (MQ=255) gCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGaa < 2:862461/150‑1 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGGGGTCCTGCGG‑TCCGGCCAAAACGCCCGGGAAGGGGTTGccgccgcgga > 1:594735/1‑145 (MQ=255) cccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAg < 2:1026820/150‑1 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGa < 1:212785/151‑1 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGa < 2:1185658/151‑1 (MQ=255) ccGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCCGCGA‑TCCGGCAAAAAAGGCCGGGAAGGGGTCGCCGCCGTGGAgg > 1:149004/1‑150 (MQ=255) cGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGTTTCCTCGG‑TCCGGCCAAAAAGCCCGGGAAGTGATcaccg > 2:188975/1‑140 (MQ=255) gcgcGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACt < 1:1110333/147‑1 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGaaa < 1:368875/150‑1 (MQ=255) gcgATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAAc < 1:23436/151‑1 (MQ=255) aTGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCt < 2:306365/151‑1 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCTGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaaa < 2:696455/151‑1 (MQ=255) gCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGaaaa < 1:741349/151‑1 (MQ=255) cGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATGCTGCGA‑TCCCGCAAAAACACCCCAGGAATGATTGGCGCCCGGTGGGACAAAACGGAAAACCTGcaaa > 2:538047/1‑150 (MQ=255) ggTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAagtagt < 2:745649/151‑1 (MQ=255) ccAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCt < 2:470440/150‑1 (MQ=255) cAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGGCCTGCGA‑TCCGGCAAAAAAGCCCCGGGAGGGGTCGCCGCCGCGGAGGACAAACTGGGAACGCTGGAAagtagt > 1:120743/1‑147 (MQ=255) tGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGa < 2:952258/150‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAgg < 2:660510/151‑1 (MQ=255) gCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGACCCGCGA‑TCCGGCAAAAAAGCCCCCGAAGTGAACGCCGCCGGGGAGGGCAAACTGGAAACGCCGAAAAAGAGTCCGCCGGGAgg > 1:545332/1‑151 (MQ=255) cGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGCCGGGGGGGGGACCCCGCGA‑CCCGGCAAAAACGCCCGAGAAGGAACAGCCGCCGGGAAGGATAAAACGCGAACGCCGAAAAGGAGTCTTCCCGAAgggg > 1:415029/1‑148 (MQ=255) agaTGCGCCGGGGCATTGCCGAACTACACGGCGAAGGCCAAGTGGAGGGGCGGGGCGG‑GACCCCTAGA‑CCCGGCCAAAACGACCGAGGCGTGAACGCCCCCCGGCAAGACAAACTGGAAAACCTGAAAATAAGTATTCCggca > 1:1174247/1‑141 (MQ=255) agaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCTGCGG‑TCCGGCAAAAACGCCCGCGAAGAGATCGCCGCCGTGAAGGACAAACTTGAAACGCTGAAAAGTAGTCTGCCGGGAGGCgggg > 2:621490/1‑150 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGgag < 1:236828/151‑1 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGga < 1:623706/150‑1 (MQ=255) gaTGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGTGATCCTGGGA‑TCCGGCAAAAAAGCCCGAGAAGGGATCGCCGCCGTGCAGGACAAACTGGAAACGCTGAAAAGGAGTCTGCCGGAAGGCGTgg > 2:431486/1‑149 (MQ=255) gcCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGCGAAGTGGTCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAg > 2:1232141/1‑150 (MQ=255) ccGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGTGAACCTGCGA‑TCCGGCAAAAAAGCCCGAGAAGTGATCGCCGCCGGGAAGGAAAAACTGGAAAAGCTGAAAAAGAGGCTGCCGGAAGGCGTGGAGATAGtt > 2:450855/1‑151 (MQ=255) ccGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGt < 1:688023/150‑1 (MQ=255) ccGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGGGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGGAGGCGTGGGGATAGtt > 2:977126/1‑151 (MQ=255) cGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTa < 2:343996/151‑1 (MQ=255) gggCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGGGGGGGGGGGGTCCTGCGG‑TCCCGCCCAAACCCCCCAGCAGGGGTCGCCGCCGTGGAGGACAAACTGGAAACGCCGCAAAGAAGTCTGCCGGGAGGCGTGGAGGTAGtt > 1:1051237/1‑148 (MQ=255) ggCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTacaa < 2:620529/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt < 2:263378/151‑1 (MQ=255) aTTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCCGGGTGGGAGTCCTGAGA‑TCCGGGAAAAAGGCCCGGGAAGTGATCGCCGCCGGGGAGGAAAAACTGGAAACGCTGGAAAGAAGTCTTCCGGAAGGCGTGGGGATAggttca > 2:1168897/1‑142 (MQ=255) ttGCCGAACTAAACGGCGAAGGCGAAGTGG‑GGGGGGGGGTGGTGATCCGGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCACCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACAt < 2:480340/150‑1 (MQ=255) ttGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGGGGTCCTGCGA‑GCCGGCAAAAACGCCCGCGAAGGGATCGCCGCCCGGAAGGACAAACTGGAAAAGCTGGAAAATAATCTGCCCGAAGGCGGGGGGAGAGATacaaaa > 1:738346/1‑147 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACg < 2:1064063/151‑1 (MQ=255) gCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGGTCCTGCGA‑TCCGGCAAAAACGCCCGGGAAGTGATCGCCGCCGTGAAGGGCAAACTGGAAAAGCTGAAAAGGAGTCTGCCGGAAGGGGTGGGGATAGTTacaaca > 2:775764/1‑147 (MQ=255) cGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGTGATCCCGCGA‑TTCGGCAAAAACGCCCGAGAAGGGATCGCCGCCGGGAAGGAAAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGATACAACATACGAt > 2:49477/1‑151 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGCGCCCCTGCGA‑TGCGGCAAAAAAGCCCCCGAAGTGATCGCCGCCCGGGAAGAGAAACATGAAACGCTGGAAAGAAGACTGCCGCGAGGAGTGGGGAGAGTTAAAACATACGaac > 1:1039476/1‑148 (MQ=255) aaCTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGATCCTGCGA‑TCCGGCAAAAAAGCCCGGGAAGAGATCGCCGCCGTGAAGGACAAAATGGGAAAGCTGAAAAAAAGTCTGCCGGAAGGCGTGGAGATAGTTAAAACATACGAt > 2:637035/1‑149 (MQ=255) aaCGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc < 2:302723/151‑1 (MQ=255) aCGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGTGGTCCCCCGA‑TTCGGCAAAAAAGCCCGCGAAGTGGTCGCCGCCGTGAAGGACAAACTGGAAACACTGCAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGcagcc > 2:1024538/1‑150 (MQ=255) cGGCGAAGGCGAAGTGG‑CGGGCGGGGGGGGGCTCCTCCGA‑CCCGGCAAAAACGCCCGAGAAGGGATGGCCGCCGGGAAGGACAAACTGGGAAAGCTGAAAAGTAGTCTGCCGGAGGGCGTGGAGATAGTTACAACACACGCTCGca > 1:418589/1‑146 (MQ=255) aaggcgaagTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTc < 1:345156/149‑1 (MQ=255) tGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCgcgc > 2:1014470/1‑151 (MQ=255) ggctggGTTGTGATCCTGCGA‑TCCGGCAAAAGCGCCCGAGAAGGGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCTCGCCATCg < 2:1124895/151‑1 (MQ=255) ggcgggGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCg > 1:160123/1‑151 (MQ=255) ggggTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAc > 1:859722/1‑150 (MQ=255) | CGCTCGACGACTTTAATCACATCGTTTTAAAAGCCAGTGAAAATGGCGTGCCCGTTTATCTGCGCGATGTTGCGAAGGTCCAGATTGGCCCGGAGATGCGCCGGGGCATTGCCGAACTAAACGGCGAAGGCGAAGTGG‑CGGGCGGGGTGGTGATCCTGCGA‑TCCGGCAAAAACGCCCGAGAAGTGATCGCCGCCGTGAAGGACAAACTGGAAACGCTGAAAAGTAGTCTGCCGGAAGGCGTGGAGATAGTTACAACATACGATCGCAGCCAGCTCATTGACCGCGCCATCGAC > NC_000913/599429‑599721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |