| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,785,500 | +T | coding (1613/2379 nt) | ppsA ← | phosphoenolpyruvate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,785,496 | 1 | . | T | 95.5% | 227.4 / ‑2.6 | 70 | N539K (AAC→AAA) | ppsA | phosphoenolpyruvate synthase |
| Reads supporting (aligned to +/- strand): ref base . (1/2); major base T (31/33); minor base C (3/0); total (35/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTGGCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑TTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTCCGG > NC_000913/1785347‑1785636 | ttGGCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑t > 1:199719/1‑151 (MQ=255) tGGCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑tt > 2:288067/1‑151 (MQ=255) tGGCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑tt > 2:663297/1‑151 (MQ=255) ggCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑tt < 1:108758/150‑1 (MQ=255) ggCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑tt < 1:502085/150‑1 (MQ=255) gCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑t < 2:172545/151‑1 (MQ=255) cATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑tt < 1:1111778/151‑2 (MQ=255) cATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑tt > 1:656749/1‑150 (MQ=255) cATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑tt < 1:358163/151‑2 (MQ=255) atatTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑ttg > 1:1157398/1‑149 (MQ=255) ttcgttcgATTTAACATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑ttgca > 1:757365/1‑146 (MQ=255) ttcgttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑ttt‑ttgca < 1:1107943/150‑5 (MQ=255) cgttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACt < 2:1127985/151‑1 (MQ=255) cgttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACt < 2:848070/151‑1 (MQ=255) cgttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGACCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACt > 2:921713/1‑151 (MQ=255) gttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTg < 1:890281/151‑1 (MQ=255) gttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTg > 2:810882/1‑151 (MQ=255) gttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTg < 1:495118/151‑1 (MQ=255) ttcgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGc > 1:1254135/1‑151 (MQ=255) cgATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCgg < 2:239801/151‑1 (MQ=255) gATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGt < 1:593820/151‑1 (MQ=255) aaaaTCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCt < 1:408298/150‑1 (MQ=255) aaaaTCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTg < 1:142414/151‑1 (MQ=255) aaaaTCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTg < 2:101181/151‑1 (MQ=255) aaTCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCGGACGACCATCGTAAAATTCTCGCGGAGAGTCGAAACCTTTCATCATCTCGCTGATTTCGTTTT‑TGCATCTGCGGTTCCTGAt < 1:757752/151‑1 (MQ=255) aaTCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGAt > 2:1042138/1‑151 (MQ=255) cAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGt > 1:1229802/1‑151 (MQ=255) agaCGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGCTTT‑TGCAACTGCGGTTCCTGATCGTCaaa > 2:779126/1‑150 (MQ=255) aaTGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCa < 1:111418/150‑1 (MQ=255) aaTGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAg < 2:648662/151‑1 (MQ=255) tGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTg > 2:209742/1‑151 (MQ=255) gcgcTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGcgcg > 2:534174/1‑151 (MQ=255) cTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCgtgg > 2:690474/1‑151 (MQ=255) cTTCGGATAAAACGCGGCACCCAGCGAAGCAATCCCTTCAGCGAGACCACCAACGGCGAATCCACCCGGAGAATCCAAACCGATCATCATCTCACGGATTTCGCATT‑TCCAACTGCAGTTCCCGTTCGTCAAACTCCAGCAGTGCACgt > 1:588469/1‑149 (MQ=255) tCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCgtgg < 2:745930/149‑1 (MQ=255) cGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCgtgggtg < 2:553700/151‑1 (MQ=255) ggATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCgtgggtgg > 1:1194992/1‑151 (MQ=255) aaaaCGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGc > 1:306055/1‑151 (MQ=255) cccAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACgg < 1:1122977/151‑1 (MQ=255) aGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACggat > 2:412112/1‑148 (MQ=255) cgcgATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTtgatga < 2:644607/150‑1 (MQ=255) gcgATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATa < 1:644325/151‑1 (MQ=255) cgATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATaa < 1:84601/151‑1 (MQ=255) gATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAACCCTTTCAACATCTCGCGGATTTCG‑TTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATaaa < 1:747425/150‑1 (MQ=255) aTCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAAt > 1:413592/1‑151 (MQ=255) agtcagACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGAcg < 1:1369761/151‑1 (MQ=255) agtcagACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGAcg > 2:884565/1‑151 (MQ=255) cagACGACCAACGTAAAATTCTCGCGGATAATCAAAACCTGTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCATTCATACGGTTGATGATAAATTCCAg < 1:1219848/145‑1 (MQ=255) agACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACgcgc > 2:1280597/1‑150 (MQ=255) acgacCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAg < 2:708749/151‑1 (MQ=255) cgacCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAg < 1:907292/150‑1 (MQ=255) gacCAACGTAAAATTCACGCGGAGAATCAAAACATTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGCCAAACTCAAGCATTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAgg > 1:1280828/1‑150 (MQ=255) ccAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGccc > 2:275911/1‑151 (MQ=255) ccAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGccc < 2:1111110/151‑1 (MQ=255) cGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGc > 1:1179329/1‑151 (MQ=255) aaaaTTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCtt < 2:922812/151‑1 (MQ=255) aaaaTTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCtt > 1:603511/1‑151 (MQ=255) aaaaTTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCt < 2:1026591/150‑1 (MQ=255) ttCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCttcgt > 1:488323/1‑150 (MQ=255) tCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCttcgtt < 1:1100142/150‑1 (MQ=255) cACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCttcgttcg > 1:603397/1‑151 (MQ=255) gcgGAGAATCAAAACCTTTCATCATCTCGCTGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTa < 2:790699/151‑1 (MQ=255) gcgGAGAATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTa < 1:689345/151‑1 (MQ=255) agaATCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTaggca < 1:298511/151‑1 (MQ=255) aaTCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTTATCGTCATACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGCCGCGCAAGGCCCACGCCTTCGTTCGGTaggcagg < 1:1422660/151‑1 (MQ=255) aaTCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTaggcagg < 2:662582/151‑1 (MQ=255) aTCAAAACCTTTCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTaggcagg > 1:218139/1‑150 (MQ=255) cTTTCATCATCTCGCCGATTTCGCTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTTCGCGTGGGTGGACGCCAATCATCCGCTTGATGATAAATTCCAGACGCGGAAGGCCCACGCCTTCGTTCGGTAGCCGGGCGACGTCg > 1:529888/1‑150 (MQ=255) tttCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGa > 1:562241/1‑150 (MQ=255) tttCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGa > 2:24632/1‑150 (MQ=255) tttCATCATCTCGCGGATTTCG‑TTTATGGAACTGCGGGTCCTGATCGTCAAACTCAAGAATTGCGTGTGGGTGGACGCCAATAATATGATTGATGATAGAGTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGTTGGTGAAGt > 1:471838/1‑147 (MQ=255) ttCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGaa > 2:690256/1‑150 (MQ=255) ttCATCATCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGACGaa > 2:186442/1‑150 (MQ=255) tcatcaTCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGTCAATCATACGGTTGATGATAAATTCCAGACGCGCAAAGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGa > 1:516119/1‑148 (MQ=255) tcatcaTCTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGaa > 2:388054/1‑149 (MQ=255) atcatcTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAACGCCCACGCCTTCGTTAGGTAGGCAGGCGAAGTCGAAAg > 1:106149/1‑149 (MQ=255) catcTCGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACg > 2:869774/1‑151 (MQ=255) tcGCGGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTcc > 1:1058306/1‑151 (MQ=255) cgcgGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTcc < 2:199728/150‑1 (MQ=255) cgcgGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTc < 2:217526/149‑1 (MQ=255) cgcgGATTTCG‑TTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTc < 2:907761/148‑1 (MQ=255) gcgGATTTCGTTTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTCCgg > 2:1395907/1‑151 (MQ=255) | TTGGCATATTCGTTCGATTTAAAATCAGAGAGACGGACAATGACGCGCTTCGGATAAAACGCGGCACCCAGCGTCGCGATCCCTTCAGTCAGACGACCAACGTAAAATTCACGCGGAGAATCAAAACCTTTCATCATCTCGCGGATTTCG‑TTT‑TGCAACTGCGGTTCCTGATCGTCAAACTCAAGCAGTGCGCGTGGGTGGACGCCAATCATACGGTTGATGATAAATTCCAGACGCGCAAGGCCCACGCCTTCGTTCGGTAGGCAGGCGAAGTCGAAAGCACGGTCCGG > NC_000913/1785347‑1785636 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |