| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,268 | 0 | T | A | 41.8% | 95.7 / 47.2 | 79 | L24F (TTA→TTT) | emrK | multidrug resistance efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base T (27/19); new base A (0/33); total (27/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.67e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGC > NC_000913/2483118‑2483417 | gTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCaataaat > 1:922653/1‑151 (MQ=255) tCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCaataaata > 2:103380/1‑150 (MQ=255) tCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCaataaata < 2:137755/150‑1 (MQ=255) cGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAataaataa > 1:502002/1‑150 (MQ=255) ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑Ct < 2:320334/147‑1 (MQ=255) ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTa < 1:805653/148‑1 (MQ=255) tATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCg < 1:383288/150‑1 (MQ=255) tATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGc > 2:958042/1‑151 (MQ=255) gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGCCCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCaa < 1:638872/151‑1 (MQ=255) gATTAACGACAGTGACACTACCGGAGACTTGTGCAGAAATTGAATCTGCATTCCCCGTTACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAACCGCAATAAATAAAT‑CTACCGCCa < 1:372483/150‑1 (MQ=255) aTTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCaa < 2:1264705/150‑1 (MQ=255) aTTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAAt > 1:1317537/1‑151 (MQ=255) aaCGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATaa > 1:1414004/1‑150 (MQ=255) aGTGACACTCCCTGAGACTTGTGAAAAAATTGGATCTCCATTCCCCGTGACATAGGCGTCATCTGTACAAATATTGTCTTCAAATCC‑CATTAACAAAAAGGAAAAGGCACCTAAAAACGCAATAAAAAAAC‑CTACCGCCAATAAAGaaaa < 1:645387/150‑1 (MQ=255) tGACACTACCTGAGACTTGTGCAAAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATTTCTTCAAATTC‑CATTGACCAATAGGCATAGGCCCCTGAAACCGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAg < 2:359422/149‑1 (MQ=255) gACACTACCTGAGACTTGTGCAGAAATTGGATCTGAATTCCCCGCGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACAAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGACAATAAAGAAAAGGAt > 1:1118815/1‑151 (MQ=255) ccggagaCTTGTACAGAAATTGGTTCTGAATTCCCCGTAAAAAAGGCTTCATCTGTACTAATAATTTCTTCTAATAC‑CATTAACAAAAAGGAAAAGACACCTAAAACCCAAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTttc < 1:148462/145‑1 (MQ=255) ccTGAGCCTTGTGCAGAAATTGGATCTGCATTCCCCGTAACATAGGCGTCATCTGTACAAATCATGTTTTTTAATCC‑CATTGACCAATAGCCATGGGCCCCAGAAAACGCAAAAAAAAAAC‑CTACCGCCAATAAAGAAAAGTATTttcttc < 2:245782/151‑1 (MQ=255) ccTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTttcttc > 2:655364/1‑151 (MQ=255) gagaTTTGTGAAAAAATGGGATCTGCATCCCCCTTGACATAGGCTTCATTTGTACAAATCATTTTTTAAAATCC‑CATTAACAAATAGGAATAGGCCCTTAAAAACCAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTtcttct < 1:932929/149‑1 (MQ=255) gagaCTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAACCGCAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTtcttct < 2:1259449/149‑1 (MQ=255) gagaCTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGt > 1:298012/1‑151 (MQ=255) gttttGTGCAAAAATTGGTTCTGCATTCCCCGTGACAGAGGCGTCATCTGTACTAATCATTTTTACTAATTC‑CATTGCCCAATAGGAAAAGGCACCTGAAACCGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGt < 1:962778/146‑1 (MQ=255) gttttGTGAAAAAATTGGATCTGAATCCCCCGTGAAATAGGCGTCATCTGAACAAATAATTTCTTAAAATTC‑CATGGACAAAAAGGAATAGGCACCT‑AAAACCCAAAAAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGtt < 1:913966/147‑1 (MQ=255) gttttGTGAAAAAATTGGATCGGCTTCCCCCGTGAAATGGGCTTCATCTTTACTAAACATGTCTACAAATTC‑CATTGACCAAAAGGAATAGCCACATAAAAACGCAAAAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTtcttct < 1:821735/144‑1 (MQ=255) ttGTGCAAAATTTGGATCTCCATCCCCCGTGAAATGGGCTTCTTCTGTACTAATCATGTCTTCTAATTC‑CATTACCAAAAAGAAATAGGCACCTAAAAACAAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAg < 1:1389627/149‑1 (MQ=255) tgtgAAAAAATTGGATCTGCATTCCCCGTGACATAGGCTTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGCCCAATGGGCATGGGCACCTGAAAACGAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGaa < 2:114095/150‑1 (MQ=255) gtgCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATg > 1:528014/1‑151 (MQ=255) gggCAAAAATTGGATCTGCATTCCCCGTAAAATGGGCGTCATCTGTACAAATCTTGTCTTCTAATCC‑AATAGACAAAAAGGCAAAGGCACCTAAAAACGCAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATg < 2:836338/149‑1 (MQ=255) aGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttt > 1:550055/1‑151 (MQ=255) aaaTTGGATCTGCTTTCCCCGTGACATAGGCGTCATCTGTACTAATCATTTCTTCTAATTC‑CATTGACCAATAGGCATAGGCCCCTAAAAACGAAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttttt < 2:1162077/151‑1 (MQ=255) aaaTTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTTTTCTAATTC‑CATTGACAAAAAGAAATAGGCACCTAAAAACGAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGttttt < 1:429324/150‑1 (MQ=255) aaaTTGGATCTGCATTCCCCGGGACATGGGCGTCATCTGTACTAATCATGTCTTCTAATCC‑AATTGACAAATGGGCATAGCCACCTAAAAACGAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttttt < 2:1051752/151‑1 (MQ=255) aaaTTGGATCTGCATCCCCGGTGAAATAGGCGCCATTTGTACTAATCATTTCTTTAAATTC‑CATTGACAAATAGGCATAGGCCCCTAAAAACGAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttttt < 2:1051366/151‑1 (MQ=255) aaaTTGGATCGGCTTTCCCCGTGACATAGGCGTCTTCTGTACTAATCTTGTCTTTTAATTC‑CATTGCCCAATAGGAATAGCCCCCTGAAAACGCAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttttt < 2:1162242/151‑1 (MQ=255) gaaTCTGCATCCCCCGTGACATGGGCGTCATTTGAACTAATCATTTCTTCTAATCC‑CTTTCACCAAGAGGCATAGGCACCGGAAACCGCAAAAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTAtt < 2:1100285/147‑1 (MQ=255) tccgccttCCCCGGGACAGAGGCGTCATCTGTTCAAATCATTTTTTCTAATCC‑CATTGACAAATAGGAATAGCCACATCAAAACGTAAAAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGaa < 2:464793/144‑1 (MQ=255) ttcttaccccGCGTCATAGGCTTCATTTCTGATAATCATTTCTTCTAATTC‑ATTTGTCCACACGCCAGCGGCCCCTGAAAACGAAAAAAAAAAAA‑ATACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGaa < 2:764556/142‑1 (MQ=255) gCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTa > 2:157917/1‑150 (MQ=255) ttCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCt > 1:714822/1‑151 (MQ=255) tCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTg > 2:64183/1‑151 (MQ=255) ccccTTGACATAGGCGTCATCTTTCATAATCATGTTTTATAATCC‑CATTACCAAAAAGGAAAAGGCCCCTGAAACCGAAAAAAAAAAAA‑TTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCt < 1:1004452/149‑1 (MQ=255) ctttGACAGAGCCGTTATCTGTAAAAATCATTAATTCTATTCT‑CATTGCCCAATAGGCACAGGCAAAAAAAAACGAATTAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCt < 2:1000337/144‑1 (MQ=255) gTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCGGAAAGCGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGATAGAATGTTTTTTATTTGAATTAATCTGTTcc > 1:564739/1‑150 (MQ=255) tGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCAc > 2:275050/1‑151 (MQ=255) gACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt > 2:840220/1‑151 (MQ=255) aTAGGCTTTATCTGAACAAATCATATCTTTAAATTC‑CATTACCCAAGAGTGATAGCCCCTTAAAAGCTAAAAAAAAAAAA‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatt < 1:603406/151‑1 (MQ=255) aTAGGCGTCATCTGTACTAATCATGTTTTCAAATTT‑CATTGACAAATAGGCATAGGCCCCTAAAAACGCAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtat < 2:891641/150‑1 (MQ=255) ggCTTCTTCTTTACTATTAATGTTTTATAATTC‑CATTAACAAATAGGCATAGCCACGGAAAAACGAAAAAAATAAAT‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtatta < 1:1240516/149‑1 (MQ=255) ggCGTCATTTTTACAAATCATGTTTTCAAATCC‑CATTGACCAATAGACATAGCCACCTAAAAACGCAATAAAAAAAT‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat < 1:59881/150‑1 (MQ=255) gCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtct > 1:1088816/1‑151 (MQ=255) cGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctc > 2:950683/1‑151 (MQ=255) ttCATCTTTCCAAATAATGTTTTAAAATTC‑CATTGACAAAAAGGAATAGGCACTTAAAAACAAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat < 1:1130588/146‑1 (MQ=255) gTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACTCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctct > 2:364408/1‑151 (MQ=255) cATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGATTTTTATTTGAATTAATCTGTTCCACTATTAtctctc > 2:941051/1‑150 (MQ=255) tGTACTAATCATGTCTTCTAATCC‑CATTGACCAATGGGCATAGGCCCCTAAAAACGCAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAttt < 2:1193172/150‑1 (MQ=255) acaaaTCTTGTCTTTTAATAC‑CATTGACCAATAGGCTTAGCCACGTAAAACCACAAAAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTtc < 2:159135/145‑1 (MQ=255) aCTAATCATGTCTT‑AAATTCAAATTGCCCAATAGGCAAAGGCCCCTGAAAACCAAATAAAAAAAA‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTtct < 2:611211/149‑1 (MQ=255) aaTCATTTTTTCTAATTC‑CATTGACCAATAGGCATAGGCCCCTAAAAACGAAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt < 2:298024/149‑1 (MQ=255) tGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGa > 1:869660/1‑150 (MQ=255) gTCTTCAAATTC‑CATTGACAAATAGGCATAGGCACCTGAAAACGCAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATAAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGa < 2:441000/149‑1 (MQ=255) tcttctAATCC‑CATTGACCAATAGGCATAGGCACCTAAAAACGCAAAAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGaa < 2:215641/149‑1 (MQ=255) ttcaAATTC‑CATTGACCATTAGGCAAAGGCACCTGAAACCGAAATAAATAAAT‑CTACCGCCAATAAAGAAAATTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGa < 1:1269686/146‑1 (MQ=255) tcaaaTCC‑CATTGACCAATAGGCATAGGCCCCAAAAAACGAAATAAAAAAAC‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAttt < 2:1187215/147‑1 (MQ=255) aaTTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtg > 2:546704/1‑150 (MQ=255) aaTTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtg > 1:319417/1‑150 (MQ=255) aaTAC‑CATTGACCAATAGACATAGGCACTTAAAACCGCAATAAAAAAAA‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAt < 1:427741/149‑1 (MQ=255) ttGACAAATAGGAAAAGACACCTGAAACCAAAAAAAAAAAAT‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg < 1:593674/148‑1 (MQ=255) tGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATtgaatg > 2:364649/1‑151 (MQ=255) aaacgacatagccaCCTAAAATCAAAAAAAAAAAAA‑TTACCGCCAATAAATAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATCAAATTTATGAATtgaatg < 1:600607/140‑1 (MQ=255) ataggcataggcACCTAAAACCGCAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAaga < 2:836539/151‑1 (MQ=255) aggcataggcaCCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGc > 1:1327115/1‑151 (MQ=255) aggaatagccaCTTAAAAACTCAAAAAATAAAA‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAagag < 1:957992/150‑1 (MQ=255) gcataggcaCCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcat > 1:231387/1‑151 (MQ=255) cataggcaCCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcatt > 1:1309629/1‑151 (MQ=255) ataggcaCCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc > 2:376993/1‑151 (MQ=255) aaaggcgcgtaaaacCGTAAAAAAAAAAA‑CTGCCGCCAATGAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATGTGTTGCACTAGTATCTCTCATTTCTCATATATGAAATTTATGAATTGAATGAAAAGAGc < 1:681784/136‑1 (MQ=255) gacaCCTAAAAACACAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattca < 1:658617/147‑1 (MQ=255) caCCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttct > 1:87569/1‑151 (MQ=255) ccaaaaaaCCCAAAAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc < 2:143127/147‑1 (MQ=255) cataaaaaCAAAATAAAAAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc < 1:121240/140‑1 (MQ=255) aaaaCGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCa < 2:174862/148‑1 (MQ=255) aaaaCGAAAAAAAAAAAA‑TTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCat < 2:1207371/149‑1 (MQ=255) ataaataaAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAacac > 1:770286/1‑150 (MQ=255) ataaataaAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAAcaca < 2:1378177/151‑1 (MQ=255) aaataaaA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGt < 2:1414097/151‑1 (MQ=255) aaaaaaaa‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGt < 2:350261/151‑1 (MQ=255) ataaaA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc > 1:605208/1‑151 (MQ=255) taaaA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc > 2:1192319/1‑150 (MQ=255) taaaA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGc > 1:410476/1‑150 (MQ=255) | GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTC‑CATTGACCAATAGGCATAGGCACCTGAAAACGCAATAAATAAAA‑CTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTGC > NC_000913/2483118‑2483417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |