| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,291,373 | G→A | L11L (TTG→TTA) | yraK → | putative fimbrial‑like adhesin protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,291,373 | 0 | G | A | 98.2% | 379.7 / ‑1.1 | 108 | L11L (TTG→TTA) | yraK | putative fimbrial‑like adhesin protein |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (56/50); total (58/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.56e-01 | |||||||||||
Only 100 of 112 total aligned reads displayed.
TGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAAC > NC_000913/3291225‑3291519 | tGTACGCTGGGGAAATCAGGCAGATCAACAATGTAAGTTTGCTTTCAGTACACCGGATTCAGAACCAACAACCTCTGTATTAAAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttatt > 1:860879/1‑151 (MQ=255) gTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttattg < 2:269050/151‑1 (MQ=255) gTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttatt < 1:116282/150‑1 (MQ=255) gTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTttatt < 1:1358613/150‑1 (MQ=255) aCGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGa < 2:439272/150‑1 (MQ=255) cGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGat > 2:764184/1‑150 (MQ=255) cGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGat < 2:39739/150‑1 (MQ=255) gCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGatat > 2:193452/1‑151 (MQ=255) cTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATc > 2:917618/1‑151 (MQ=255) cTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATc > 1:442304/1‑151 (MQ=255) tGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATcc > 2:700193/1‑151 (MQ=255) gggAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCcac > 2:1208366/1‑151 (MQ=255) ggAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCcaca < 2:1166631/151‑1 (MQ=255) ggAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCcaca < 1:27847/151‑1 (MQ=255) aaaTCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATc < 2:644683/151‑1 (MQ=255) cAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGAT‑AAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTgc < 2:1274520/150‑1 (MQ=255) ggCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTgcg < 1:370450/150‑1 (MQ=255) cAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCtt > 2:183035/1‑151 (MQ=255) cAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCtt < 2:655186/151‑1 (MQ=255) aTCAACAATGGCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAACGCCTCTTATAACAGGACTTTTATTGATATCCACATCCTGCGCTTAt > 1:6164/1‑150 (MQ=255) tCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGc > 1:682524/1‑151 (MQ=255) caaTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGcctcc > 1:509779/1‑151 (MQ=255) aaTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGcctcct < 2:1349622/151‑1 (MQ=255) aTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCctcctc > 2:145190/1‑151 (MQ=255) aTGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCctcctc > 2:829207/1‑151 (MQ=255) tCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCagg > 2:148721/1‑151 (MQ=255) cAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCagg > 1:68237/1‑150 (MQ=255) aGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCaggag < 2:75094/151‑1 (MQ=255) gcttGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGCCATAGCGCAGTGCCAATAAGGATAAAAAAATGAAAAGTGCGCCTCTAATAACAGGTCTTTTACTGATATCGACATCCTGCGTTTTTGCCTCCTCaggtgg > 1:733750/3‑151 (MQ=255) tGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGgtg > 2:360093/1‑151 (MQ=255) tGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGgt < 2:1318332/150‑1 (MQ=255) tGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGgt < 1:429364/150‑1 (MQ=255) gCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGgtgt < 2:119371/151‑1 (MQ=255) cTTTCAGTACACCGGATTCAGAACATACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGtgtg > 1:989908/1‑151 (MQ=255) aGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGcc > 1:267856/1‑151 (MQ=255) cacCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACa < 2:122054/151‑1 (MQ=255) acCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGAc > 1:246516/1‑149 (MQ=255) cGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGc > 2:467379/1‑150 (MQ=255) cGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGc > 2:647825/1‑150 (MQ=255) ggATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCAc > 2:75635/1‑151 (MQ=255) gATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACt < 2:209160/151‑1 (MQ=255) gATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCACCTCAGGAGGGTGTGGAGCCGACAGCACt > 2:883294/1‑151 (MQ=255) aGAACCTACAACCTCTGTATTACAAGGCAAAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGATGGTGTGGATCAGACAGCACTAGc < 1:4416/149‑1 (MQ=255) gAACCCAAAACCCCTGGAATACCAGGGACCGCCCAGGTCCCTTTAAGAAAAAAAAAAGAAAAGGGCGCCCCTTTAAACCGGGCGTTTATTGATACCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCg < 2:906943/149‑1 (MQ=255) aaCCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTg < 1:614637/151‑1 (MQ=255) aaCCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTg > 2:1145674/1‑151 (MQ=255) cTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCg > 1:434980/1‑150 (MQ=255) aCAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCggc < 1:682116/150‑3 (MQ=255) aCAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGAc < 2:56077/150‑1 (MQ=255) cAACCTCTTTATCACAAGGCACAGCGCAGTGCCATTATGGATAAAAAAATGAAAAGAGCGCCTCTTATAACACGTCTATTATTGATATCCACATCCTGCCCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACaa < 1:88601/151‑1 (MQ=255) cAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGa < 1:772178/148‑1 (MQ=255) aCCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAAt > 1:410950/1‑151 (MQ=255) ccTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAAtt > 2:642140/1‑151 (MQ=255) ctctGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAAtt > 1:1346624/1‑150 (MQ=255) tctGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAc > 2:228277/1‑151 (MQ=255) tGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAc > 1:475135/1‑149 (MQ=255) gTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAcagc > 1:622176/1‑151 (MQ=255) gTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAca < 2:755911/149‑1 (MQ=255) gTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATAACCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAcag < 1:1376560/150‑1 (MQ=255) aTTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTAcagcag < 1:208813/151‑1 (MQ=255) aCAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAgtg > 1:510161/1‑150 (MQ=255) aaGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTgg > 2:522521/1‑151 (MQ=255) aGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGt < 2:949578/151‑1 (MQ=255) cacaGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTtga < 2:1061730/151‑1 (MQ=255) acaGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTtgat < 2:673159/151‑1 (MQ=255) acaGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTtgat < 2:1220901/151‑1 (MQ=255) caGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTtgatg > 1:815822/1‑151 (MQ=255) caGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTAGAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTtgatg > 2:1422419/1‑151 (MQ=255) gcAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGt > 2:918844/1‑151 (MQ=255) aGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGt < 2:898263/149‑1 (MQ=255) tAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAAc > 2:1073278/1‑151 (MQ=255) aaGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAAcc > 2:747295/1‑151 (MQ=255) ggATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCGCTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACcag < 2:131010/151‑1 (MQ=255) ggATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACcag < 2:1024144/151‑1 (MQ=255) gATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAAcc > 2:188873/1‑148 (MQ=255) aaaaaaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGCGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACcagac > 1:263400/1‑149 (MQ=255) aaaaaaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACcagaca < 2:426225/150‑1 (MQ=255) aaaaaaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACcagac > 2:732017/1‑149 (MQ=255) aaaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGAt > 1:1249925/1‑150 (MQ=255) aaaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATa < 2:385066/151‑1 (MQ=255) aaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATaa < 1:1384415/151‑1 (MQ=255) aaaTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATaa < 1:498226/151‑1 (MQ=255) aTGAAAAGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACg > 1:721026/1‑151 (MQ=255) gAAAAGAGCGCATCTTATAACAGCTCTTTTATTGATATCAACATCCTGCGCCTACGCCACCCCACGAGGGGGTGGAGCCGACATCATTAGCGGTGCGACAAATTACAGCAGTGTGGTGGATGGTGTTACGCGGAACGAGACAGATAAGGTg > 1:105694/1‑151 (MQ=255) aaaGAGCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGAc < 2:1279466/151‑1 (MQ=255) agagCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAg < 2:331880/151‑1 (MQ=255) gagCGCCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAgg < 2:62917/151‑1 (MQ=255) cgcCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGAc > 1:706006/1‑150 (MQ=255) gcCTCTTATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACgg > 1:232636/1‑151 (MQ=255) ttATAGCAGGTCTTTTACTGATATCAACATCCTGCGCTTATGCGTCCTCAGGGGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATAACAGCAGGGTGGTTGATGAAGTTACGGTGAACAAGACAGATAACGTGACAGGACGGGAGtt > 1:967190/1‑151 (MQ=255) ttATAACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGtt > 2:1041811/1‑151 (MQ=255) taACAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTAc > 2:955850/1‑151 (MQ=255) aaCAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTAcc > 1:73650/1‑151 (MQ=255) aaCAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTAcc > 1:1297217/1‑151 (MQ=255) cAGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACctc > 1:1349424/1‑151 (MQ=255) aGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACctct < 1:360080/151‑1 (MQ=255) aGGTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACctct < 1:259866/151‑1 (MQ=255) ggTCTTTTATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTg < 1:1091524/151‑1 (MQ=255) ttttATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAAc > 2:1383180/1‑151 (MQ=255) tttATTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAAc < 2:461725/150‑1 (MQ=255) | TGTACGCTGGGGAAATCAGGCAGATCAACAATGTCAGTTTGCTTTCAGTACACCGGATTCAGAACCTACAACCTCTGTATTACAAGGCACAGCGCAGTGCCATTAAGGATAAAAAAATGAAAAGAGCGCCTCTTATAACAGGTCTTTTGTTGATATCCACATCCTGCGCTTATGCCTCCTCAGGAGGGTGTGGAGCCGACAGCACTAGCGGTGCGACAAATTACAGCAGTGTGGTTGATGATGTTACGGTGAACCAGACAGATAACGTGACAGGACGGGAGTTTACCTCTGCAAC > NC_000913/3291225‑3291519 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |