| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,901,405 | C→T | L272L (CTG→CTA) | bglH ← | carbohydrate‑specific outer membrane porin, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,901,405 | 0 | C | T | 96.8% | 334.2 / 0.7 | 95 | L272L (CTG→CTA) | bglH | carbohydrate‑specific outer membrane porin, cryptic |
| Reads supporting (aligned to +/- strand): ref base C (1/2); new base T (53/39); total (54/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.91e-01 | |||||||||||
GTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGC > NC_000913/3901261‑3901552 | gTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGcgcg < 2:940532/151‑1 (MQ=255) tttGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGcgcg > 2:199342/1‑150 (MQ=255) gCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGatat < 1:110654/151‑1 (MQ=255) gCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGatat > 2:451411/1‑151 (MQ=255) cGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATc > 2:424323/1‑150 (MQ=255) cGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCa < 2:1046583/151‑1 (MQ=255) gACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAAt < 1:133355/150‑1 (MQ=255) aCATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAAttt > 2:5102/1‑151 (MQ=255) aCATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAAttt < 1:427965/151‑1 (MQ=255) aTAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTGTTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGAAATCTTCGCGAACTAGCGCGATATCAAtttt > 1:477919/1‑150 (MQ=255) cGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCg > 2:514614/1‑151 (MQ=255) gACCACTTTCCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGCTCGTAAACATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCgg < 1:398570/151‑1 (MQ=255) gACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCgg < 1:540121/151‑1 (MQ=255) gACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCgg > 2:775298/1‑151 (MQ=255) aCTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCg < 2:1097987/151‑1 (MQ=255) aCCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACt < 2:319547/150‑1 (MQ=255) ccATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACttt > 1:234640/1‑151 (MQ=255) ggTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGttt < 1:807108/151‑1 (MQ=255) tGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTc > 2:821596/1‑151 (MQ=255) ggCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTcc > 1:22838/1‑151 (MQ=255) ggCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTcc > 2:616303/1‑151 (MQ=255) tttATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTc > 1:576819/1‑147 (MQ=255) cccATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTa > 1:1315383/1‑150 (MQ=255) ccATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTac > 2:212065/1‑150 (MQ=255) cATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCGTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTacac < 1:1326922/151‑1 (MQ=255) aTAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACAcc < 2:460716/151‑1 (MQ=255) aaCGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACAccc < 1:517227/150‑1 (MQ=255) cGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCt < 1:395685/151‑1 (MQ=255) cGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCt > 2:584438/1‑151 (MQ=255) gggATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTg > 2:1005766/1‑151 (MQ=255) gggATATCTTTATAGCGGAAATCCATGGTAGTGGTATTAATCTGCTGTTTGTTTTGCATGATGAGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACTCGCTg > 1:1150396/1‑151 (MQ=255) gATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCg < 2:700814/151‑1 (MQ=255) gATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCg < 2:697819/151‑1 (MQ=255) tatCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGc > 2:293145/1‑151 (MQ=255) atCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGc > 1:1246386/1‑150 (MQ=255) agcTTTATAGCGTAAATGATTGGTATTGGGATTTGTCGGCTGTTTGTGTTGCAGGCTGGGGTCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAGTCTTACGCGGACTGACTTTCCAGGTTTCCAGCCCTACACCCGCTGc > 1:82046/3‑147 (MQ=255) cTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATc > 1:1138447/1‑151 (MQ=255) tttATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATc > 2:932980/1‑150 (MQ=255) tttATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATc > 2:414061/1‑150 (MQ=255) ttATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATc < 1:1306773/149‑1 (MQ=255) ataGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAg > 1:384329/1‑149 (MQ=255) gCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGc > 2:1041254/1‑151 (MQ=255) gCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGGTTTGCAGGCTGCGCTCGTAATCCTCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCCGCATCAGTat < 1:706936/149‑2 (MQ=255) tAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGCTCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGc > 1:521769/1‑151 (MQ=255) aaaTCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCg > 2:570497/1‑151 (MQ=255) aaTCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGt > 1:788900/1‑151 (MQ=255) aTCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGtt < 1:390306/151‑1 (MQ=255) tCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGttt > 1:79568/1‑151 (MQ=255) tCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGttt > 2:341410/1‑151 (MQ=255) cAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGtttt > 2:673437/1‑151 (MQ=255) aaTGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTc > 2:1082474/1‑151 (MQ=255) aaTGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTc > 2:69354/1‑151 (MQ=255) aaTGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTGTACCCGGACCGACTTTCCAGTTTTCCAGGCCTTCACCCGCTGCGGCATCAGTGCGCTGCGTTTTc < 1:1198049/151‑1 (MQ=255) aTGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTcc > 1:794846/1‑151 (MQ=255) ggtattggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAg < 2:1411456/151‑1 (MQ=255) gtattggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACTCTGCGTTTTCCAGt < 1:417306/151‑1 (MQ=255) gtattggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGt > 1:858637/1‑151 (MQ=255) tattggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTc > 1:1024797/1‑151 (MQ=255) tattggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTc > 2:983146/1‑151 (MQ=255) attggcattAATCTGCTGTTTGTTTTTCAGGCCGGGATCGTAATCATCGACATCTTCGCGAACTAGCGCGCAATCAATTTTACCCGGACCGAGTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGt > 1:731611/1‑149 (MQ=255) tggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCaa < 1:344116/150‑1 (MQ=255) ggtattAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGc > 1:595438/1‑151 (MQ=255) attAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATc > 1:1192239/1‑151 (MQ=255) tAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCt < 1:858991/150‑1 (MQ=255) aaTCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTgg > 1:800426/1‑151 (MQ=255) aTCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTgg > 2:1350958/1‑150 (MQ=255) tgctgTTTTTTTTGCAGGCTGCGACCGT‑ATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGa < 2:357576/147‑1 (MQ=255) tgctgTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGAttt > 2:364499/1‑151 (MQ=255) tgctgTTTGTTTTGCACGCTGCGATCGTAATCATCGACATCTTCGCGACCTAGCGCGATATCACTTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCCAGCATCTGGCttt > 1:766456/1‑151 (MQ=255) gctgTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGAttt < 2:991980/150‑1 (MQ=255) gctgTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTc < 2:20240/151‑1 (MQ=255) actgTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTc > 1:648130/2‑151 (MQ=255) ttttGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCg > 2:741991/1‑151 (MQ=255) ttGCAGGCTGCGATCGTAATCATCGACAGCTTCGCGAACTAGCGCGATATCAATTTTCCCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTTCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCg < 2:1221573/149‑1 (MQ=255) gCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGgcgc > 2:238333/1‑151 (MQ=255) aGGCTGCTATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCCGACCGACTTTCCAGTTTTCGAGACCTACTCCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGgc < 1:1197456/147‑1 (MQ=255) aGGCTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCAc < 1:1182451/151‑1 (MQ=255) cTGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCAcc > 2:977606/1‑149 (MQ=255) tGCGATCGTAATCATCGACCGCTTCGCTAACTAGCGCGATATCAATTTGTCCCGGGGCGGCTTTCCAGTTTTCCAGACCCACCCCCGCTGCGGCCTTAGTACTCTGCGTTTTCCAGTCTAGCGTCTGGATTTCAATTTTCGGCGCCCCg < 1:251140/149‑1 (MQ=255) tGCGATCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCgtg > 2:608854/1‑151 (MQ=255) tCGTAATCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTa < 1:1345875/150‑1 (MQ=255) aaTCATCGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTaccca < 2:452170/150‑1 (MQ=255) catcGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTacccaccc < 1:921506/150‑1 (MQ=255) catcGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTacccaccc > 2:362015/1‑150 (MQ=255) catcGACATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTAcccaccca < 1:199333/151‑1 (MQ=255) cgccATCTTCGCGAACTAGCGCGATCTCAATTTTACCCGGCCCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTTCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGa < 1:615328/147‑1 (MQ=255) aCATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAAt > 1:979019/1‑151 (MQ=255) cATCTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATc < 2:750873/151‑1 (MQ=255) cTTCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTCACCCACCCAGAAATCAGc > 2:323104/1‑151 (MQ=255) tCGCGAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGc < 1:1022452/149‑1 (MQ=255) cgcgATCTACCGCGATCTCAATTTTACCCGGACCGACATCCCATTTTTCCAGACCGACTCCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCAACTGGATTTCCATTTTCGACGCACCGTGTTTACCCACCCAGAAATCAGcc < 1:56204/149‑1 (MQ=255) cgAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTg > 2:341979/1‑151 (MQ=255) gAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTgg < 1:380661/151‑1 (MQ=255) gAACTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTgg < 1:656474/151‑1 (MQ=255) aaCTAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGgc > 2:800653/1‑151 (MQ=255) | GTTTGCCGTGACATAACGACCACTTACCATTAAGGTGGCTTTATCCCATAACGGGATATCTTTATAGCGTAAATCAATGGTATTGGTATTAATCTGCTGTTTGTTTTGCAGGCTGCGATCGTAATCATCGACATCTTCGCGAACCAGCGCGATATCAATTTTACCCGGACCGACTTTCCAGTTTTCCAGACCTACACCCGCTGCGGCATCAGTACGCTGCGTTTTCCAGTCAAGCATCTGGATTTCAATTTTCGGCGCACCGTGTTTACCCACCCAGAAATCAGCCTCTGGC > NC_000913/3901261‑3901552 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |