| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,097,038 | 0 | A | G | 39.1% | 94.5 / 14.5 | 64 | intergenic (+209/+527) | ycdU/serX | putative inner membrane protein/tRNA‑Ser |
| Reads supporting (aligned to +/- strand): ref base A (11/28); new base G (24/1); total (35/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.68e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTAC > NC_000913/1096889‑1097185 | gagtgttgCCTGAGTAACCAGACAGTTGATGTGCTCGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCTGCCGGTGTGTGCAATATTCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGa < 2:777766/147‑1 (MQ=25) tgACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACt < 1:84570/150‑1 (MQ=255) gACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACtc > 2:1187882/1‑150 (MQ=255) taGTCACCAGCCTGTTTGTGTGCACCTTTTCACTTGTCTCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAAGATGGTTTTTAGGGGGGGGTTGACtggctt < 1:246952/149‑1 (MQ=12) gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttc < 2:358901/151‑1 (MQ=255) gAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGACTGagtggcc > 2:187555/1‑143 (MQ=255) gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGaaacgc > 1:1138282/1‑141 (MQ=255) gTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACtcgcttcg < 1:18422/150‑1 (MQ=255) aCCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTtcgctcg < 1:95866/151‑1 (MQ=255) cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTTGGGGGGGGGGTTACTCGCTTTGCTCCCCCTg > 1:662897/1‑150 (MQ=21) cAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGc < 2:65718/151‑1 (MQ=255) gTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGTTGACTCGCCTCGCCCGCCCTGCgg > 1:491240/1‑151 (MQ=255) aTGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAg < 1:48379/151‑1 (MQ=255) gCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑ccc < 2:797804/150‑1 (MQ=255) cGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCt < 2:518015/150‑1 (MQ=255) aTTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGGTTACTCGCTTCTCCCGCCCCGCTGGcgaccccccccc > 2:777116/1‑140 (MQ=18) ccccTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGc < 1:679760/150‑1 (MQ=255) cGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGATTGACTCCCTTCCGCCGCCCCGCGGGCAG‑CCCCCCCA‑CTCCGt > 1:146293/1‑147 (MQ=17) cccTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACgg < 1:519082/151‑1 (MQ=255) aaCAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGGGAGGGGGGGGGTGAATCGCTTCGCCCCCCCTGCGGGCAG‑CCCGCCCA‑cggggggtgcggggtg > 2:215752/1‑136 (MQ=14) aGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGGGATGACTCCATTCGCTCCCCCCGCGGGCAG‑CCCCCCCA‑c > 1:537707/1‑133 (MQ=14) aCGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTTAACCGCTTCCCTCGCCCTCCGGGCAG‑CCCCCCCA‑CTCCGTTTACCGTCTG‑t > 1:307595/1‑147 (MQ=14) gggCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCTCGCCCCGCGGGCAG‑CCCCCCCA‑CCGCGGTTACGGTCTG‑Tcc > 1:970225/1‑145 (MQ=11) gggggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGt < 1:444881/151‑1 (MQ=34) ggCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑c < 2:527751/151‑1 (MQ=32) aaTATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCg < 2:639436/151‑1 (MQ=31) atatACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCgg < 1:243906/151‑1 (MQ=31) aCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCTCGCCCTGCGGGCCG‑CCCCCTCA‑CCGCGGTCACCGGCTG‑TTCAACCGGCTGTCG‑C‑CA‑G‑GTGT‑C‑G‑ACCCCCGGGCgg > 1:328139/1‑151 (MQ=11) aCGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCg < 2:55931/150‑1 (MQ=31) cGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCggg < 1:121143/151‑1 (MQ=31) aaaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCt < 1:1092976/151‑1 (MQ=31) aaaaaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGACTCGCTTCGCTCGCCCTTCGGGGAG‑GCCCCCCC‑CTGCGTTTACGGGCTG‑TCCCACCGGCGGTCG‑C‑CA‑G‑GTGT‑C‑GCACCCCCGG‑Cgggg > 2:328865/1‑148 (MQ=1) aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGATTGACTCCCTTCCCTCGCCCTGCGGGCCG‑CCCCCTCA‑CCTCGTTTACCGGCTG‑TCCCACTGGCTGTCG‑C‑CC‑G‑GTGT‑C‑G‑ACCCCCCGGCGGGGGTtccc > 1:1186882/1‑149 (MQ=11) aaaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCGCTTCGCCCGCCCTGCGGGCAG‑CCCCCCCC‑CTCCGGTCACGGTCCT‑TCCCACTCGCTGTCG‑C‑CC‑G‑TTTT‑C‑GAACCCCCGGCCgggcgt > 1:994099/1‑145 (MQ=1) aaGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAATGACTCCCCTTGCCCGCCCTGCCGGCAG‑CCCCCCCA‑CCGCGGTCACCGTTTG‑TCCCACTGGGTGTCG‑C‑CC‑A‑TTGTCC‑C‑ACCCCCGG‑CGGGGGTtct > 1:162634/1‑149 (MQ=0) aGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGTTGAATCGCCTCGCTCCCCCCGCGGGCAG‑GCCCCGCC‑CCGCGGTCCCGGGCTG‑TCCCACCTGCTGTCG‑C‑CC‑C‑GTGTCC‑G‑ACCCCCGG‑CGGGGGGtctc > 1:298880/1‑149 (MQ=2) cccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATcc < 2:847830/151‑1 (MQ=31) ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGGGGGGGGGGTTGAATCCCCTCGCTCCCCCTGCGGGCAG‑GCCCCCCC‑CCGCGTTTACCGGCTG‑TCCAACTTGCTGTCG‑C‑CA‑G‑CTGT‑C‑GCACCCCCGG‑CGGGGGATGTCATccc > 1:951019/1‑151 (MQ=0) ccGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACTCCCCTCGCTCGCCCCGCGGGGAG‑CCCCCCCC‑CTGCGTTCACGGGCTT‑TCCAACTCGCTGTCG‑C‑CC‑C‑TTGT‑C‑G‑ACCCCCCGGCGGGGCTTTTCATccc > 1:375049/1‑151 (MQ=11) cGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACTCGCTTTGCTCGCCCCTCGGGCGG‑CCCGCTCC‑CTGCGGTTACGGGCTG‑TTCCACCAGCTGTTGCC‑CG‑G‑TTTT‑T‑G‑ACCCCC‑GTCGGGGGCTCTCATcccc > 2:1024554/1‑151 (MQ=2) gTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATccccc < 1:464243/151‑1 (MQ=31) tACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCCCTTCGCTCGCCCCGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTCGCCGTCG‑C‑CA‑G‑TTTT‑T‑G‑ACCCCCCGGCGGGGGGTTTCATcccccc > 1:1122722/1‑151 (MQ=11) aCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATcccccc < 1:813380/150‑1 (MQ=31) aCTTTCGTACGAGCTCTTCTTTAAATATGGCGGATGGGGGGGGGTTGACTTCCTTCGCCCCCCCTCCGGGGGGCCCCGCTC‑‑CTCCGTTCCCGGGGTT‑TCCGACTGGCCTTCT‑C‑CG‑GTTTGT‑C‑C‑TCCCCCCGACGGGG‑TTCTCATcccccc > 2:883877/1‑150 (MQ=2) ttCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGgt < 1:169938/150‑1 (MQ=31) cGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAGTGGCTCGCGTCCCCCGCCCCGCGGGCAG‑CCCCCTCC‑CCGCGGTCACGGGCTT‑TGCCACCGGCTCCGC‑C‑CC‑G‑TTTTCC‑G‑ACCCCCGGCGGGGGCTTCCCCCCCCCCCGgtgg > 2:737988/1‑150 (MQ=2) gTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGAACCGCTTCGCCCCCCCCGCGGGCGG‑CCCCCCCC‑CCGCGGTCTCGGGCTT‑TCCCACTCGCTGTCG‑C‑CC‑G‑TTGTCC‑G‑ACCCCCGGCCGGGG‑TTCTCCTcccccc > 2:834321/1‑144 (MQ=2) tACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTTAATCGCTTCTCCCGCCCCCCGGGCGG‑CCCGCCCC‑CTGCGTTTTCGGGCTT‑TCCAACAGGCCGTCG‑C‑CA‑C‑TTGT‑T‑G‑GCCCCCCGGCGGGGCTtctccctccccc > 2:314655/1‑135 (MQ=2) aCGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGAATCCCTTCCCTCCCCCTGCGGGGAG‑CCCGCTCA‑CCGCGGTTACCGGCTG‑TCCCACCTGCCGGCG‑C‑CC‑G‑GTGTCC‑G‑ACCCCCGG‑CGGGGGTTCTCCTcccccccggggggg > 2:257732/1‑142 (MQ=2) gCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGACCCGCCTCGCTCGCCCTGCGGGCAG‑CCCGCCCA‑CCGCGTTTACCGGGTG‑TCCCACTGGCTGTCG‑C‑CC‑G‑TTTT‑CGG‑ACCCCCGTCCGGGGC‑TCTCCTCCCCCCCGGGTGTGcca > 2:1084972/1‑147 (MQ=0) gCTCTTCTTTAAATATGGCGGTGAGGGGGGGGGTGAAACGGTTCCCTCCCCCCGCAGGGAG‑CCCGCCCC‑CTGGGGTCACGGTTTG‑TTCAACAGGGTGTTG‑G‑CAGG‑TTTC‑C‑A‑ACCCCCGGGGGGGGC‑TCTCCTcccccccgggggtggca > 2:433361/1‑138 (MQ=0) cttcttTAAATATGGCGGTGAGGGGGGGGGTTAATCGCTTCGCCCCCCCCCCGGGGAG‑GCCGCCCC‑CTGCGTTTACGGGCTGTTCCACCTGGCGTCCC‑C‑CG‑G‑TTTT‑G‑G‑CCCCCCGGCGGGGGCttttttaccccc > 2:1080953/1‑125 (MQ=2) tcttTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACg < 2:343380/150‑1 (MQ=33) tttAAATATGGCGGTGAGGGGGGGGTTTAATCGCTTCGCTCCCCCCGCGGGCAG‑CCCGCCCA‑CTGCGGTTTCGGGCTG‑TCCCACCCGCTGTTC‑C‑CC‑G‑TTTT‑T‑GCACCCCCGGCGGGGGCTCCCCTCCCCCCCggggggggaataca > 2:58476/1‑134 (MQ=0) tttAAATATGGCGGTGAGGGGGGGGATGACTTGCTTCCCTCGCCATCCGGGGAA‑CCCGCTCACCTCGGTTCA‑GGTCTG‑TTCAACATGGTGTGG‑CGCA‑G‑TTGT‑G‑G‑ACCCCGGGGGGGGGGTCTTGATCCCCCCggggggg > 2:642937/1‑134 (MQ=2) tttAAATATGGCGGTGAGGGGGGGATTAACTCCCTTCCCTCGCCCCGCGGGCGG‑CCCCCTTC‑CCGCGCTTACGGGCTG‑TCCAAACGGGTCTCG‑C‑CA‑C‑TTGT‑C‑G‑TCCCCCGCCCGCGGCTTCTCCTCCCCCCCgtggggg > 2:963656/1‑135 (MQ=2) ttAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaa < 1:406597/150‑1 (MQ=33) atatGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGaaaaaaa > 1:764224/1‑150 (MQ=33) gCGGTGAGGGGGGGATTGACTCGCTTCGCTTGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCg < 1:683171/151‑1 (MQ=18) aGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTT‑TCCAACTGCCTGTCG‑C‑CA‑G‑GTGA‑C‑G‑GCCCCCGTTCGGGGCGTCTCCTCCCCCCGGTGTGTGCAATAGACGAAAAAAAAGCCCGTACttt > 2:76419/1‑151 (MQ=11) gggggggATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTc < 1:479745/151‑1 (MQ=33) gggggggATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTc < 2:121634/151‑1 (MQ=33) gggggATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGt > 1:701468/1‑151 (MQ=33) ggggATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTa < 2:547764/151‑1 (MQ=33) gggATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTAc < 2:456072/151‑1 (MQ=33) | GATTGTTGACTGAGTAACCAGACAGTTGATGTGCACGATTTCCCCTCGCCCTAACAGACGTGGGCGGGGGCACCCGGTGTGTGCAATATACGAAAAAAAAGCCCGTACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTGACTCGCTTCGCTCGCCCTGCGGGCAG‑CCCGCTCA‑CTGCGTTCACGGTCTG‑TCCAACTGGCTGTCG‑C‑CA‑G‑TTGT‑C‑G‑ACCCCCGGTCGGGGCTTCTCATCCCCCCGGTGTGTGCAATACACGAAAAAAAAGCCCGTACTTTCGTAC > NC_000913/1096889‑1097185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |