| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 345,328 | 0 | C | A | 40.5% | 121.8 / 53.9 | 84 | intergenic (+337/‑76) | yahL/yahM | uncharacterized protein/uncharacterized protein |
| Reads supporting (aligned to +/- strand): ref base C (45/5); new base A (0/34); total (45/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.56e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCC > NC_000913/345180‑345477 | aaaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaa < 2:382236/151‑1 (MQ=255) aaaaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaa > 2:112684/1‑150 (MQ=255) aaTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCaaaaa < 2:513817/151‑1 (MQ=255) aTGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAAc < 2:1229386/151‑1 (MQ=255) tGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAAcc > 2:294246/1‑151 (MQ=255) aTCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGc > 2:1291268/1‑151 (MQ=255) gCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGc > 2:759062/1‑151 (MQ=255) aGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCtc > 2:700372/1‑151 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCtcatc > 1:1005330/1‑150 (MQ=255) gTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCtcatc > 2:210411/1‑150 (MQ=255) ttttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCtcatc > 1:826619/1‑149 (MQ=255) tttGTGATTGTGTGGGTTGACATTAATAAAAAAAAAATCATAATCCAATCAT‑TTTGTGGGGGGTTTTTTCTTTTTTCTTAC‑GCACCACCCCCACGCCTAACAAAAAATATGTGGAAAGC‑CTAAAATAAAAAACCGCCATTAGCTCATCAg < 1:782110/150‑1 (MQ=255) tttGTGAATGTGTTGGTTGACATTCATATGAAAAAAATAATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAgg > 1:490521/1‑151 (MQ=255) tgAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGa > 2:1294979/1‑148 (MQ=255) tgtgTTGTTTGACATTCATAAAAAAAAAATAAAAATCCCATCTTTTTTGGGGGGTTTTTTTTT‑TGTCTTTCAC‑ACATCGCCTCCAACCCTAAAAAAAAATATGCTTAAAGG‑TAAATACAAAAAACCGCCATTAGCTCATCAGGAagag < 2:328001/148‑1 (MQ=255) tgtgTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGc > 2:1286567/1‑149 (MQ=255) tgtTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAgac > 2:1011941/1‑151 (MQ=255) tggttgACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAgacgac > 2:339153/1‑151 (MQ=255) ttCATAAAAAAAAAACCATAAGCCCATAATGTTTGTGGGGGTTCTTGTC‑TGTTTCTGAC‑CCACCCCGCTCACGCCTGACAAAAAATACGCTTTAGTA‑CACAGATAAAAAGCCGCCATTAGCTCATCAGGAAGAGCAGACGA‑AACCAGGa < 2:960199/149‑1 (MQ=255) aaaaaaaTCAGAATCCTACTATGTTTGGGGGGGTTCTTTTC‑GGTATTTAACGGCACCG‑ACTCAAGCCGAACAAAATGTTGGCCGAAAGG‑CTCAGATCAAAAGCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATtgttgt < 2:189027/149‑1 (MQ=255) aaaaaaACATAATCCCATCTTTTTTGTGGGGGTTTTTTTC‑TGTATCTTAC‑GCACCCCCCTCAACCCGGAAAAAAAATTGGTTGTAAGG‑CTCATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATg < 2:113173/151‑1 (MQ=255) tCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACgg > 1:1294504/1‑151 (MQ=255) aaacgcccATCTTTTTTGGGGGGGTTTTTTTC‑TTTATCTAAC‑CCACCGCCCAAACGCCTAAAAAAAAATATGCTGTAAGG‑CACATATAAAAATCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACggg < 1:583193/144‑1 (MQ=255) aTAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACgggg > 1:951722/1‑151 (MQ=255) aTAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACgggg > 1:580525/1‑151 (MQ=255) aaTTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGtt > 2:317741/1‑151 (MQ=255) aaTCCCATCATTTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTAAAGCCTAAAAAAAAATATGCTGAAAGG‑CTCATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACg < 2:250635/146‑1 (MQ=255) aTTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGtt > 1:193252/1‑150 (MQ=255) ccATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCg > 1:1029739/1‑149 (MQ=255) catGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCt > 2:351390/1‑151 (MQ=255) tttttGGGTGGGTTTTTTTC‑TTTCTTTGCC‑GCACCGCCCCAAAGCCTAACAAAAAATATGCTGAAAGG‑CTAAAATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTc < 1:401801/148‑1 (MQ=255) gtgtgGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATgg > 2:701269/1‑150 (MQ=255) gtgtgGGGCCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGc > 1:1161255/1‑151 (MQ=255) gtgGGGTCTTTTC‑TTTTTCTTAC‑TCACCGCACCAAACCCTAACAAAAAAGAGCCTGAAGGC‑CTCATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATgg < 1:208934/148‑1 (MQ=255) gggggtttttttC‑TTTATCTCAC‑CCACCCCACACACGCAAAAAAAAAAATATGCGATGATG‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATg < 1:331712/139‑1 (MQ=255) gtttttttttC‑TGTATCTTCC‑GCGTCCCACACAGGCCAGACAGAAAATATGTTGTAAGG‑TTTTTATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGt < 2:1084977/144‑1 (MQ=255) gggtttttttC‑TTTATTTTAC‑CCACCCCACAAAACCCTAAAAAAAAATATG‑TTTAAGGCCTAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTc < 2:79762/145‑1 (MQ=255) gggtttttttC‑TTTATCTTAC‑CCATCGCTCTCAAGCCAGACAAAAAATATGCTGAAAGC‑CCAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGt < 2:305716/144‑1 (MQ=255) ggggTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTc > 1:328660/1‑151 (MQ=255) ggTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTcc > 1:318402/1‑150 (MQ=255) gTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCa > 2:1181889/1‑150 (MQ=255) tttC‑TGTATCTTAC‑GCATAGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACttt > 1:299555/1‑151 (MQ=255) ttC‑TGTTTCTTCC‑GCTACCCACAAAAGCCAAAAAAAAAATTTGCGGAAAGG‑CTAATATAAAAACCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACttt < 1:1191565/150‑1 (MQ=255) ttccccaccccacacaAGCCGAAAAAAAAATATGTTGAAAGG‑TAAAAAAAAAAACCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAActc < 1:92333/140‑1 (MQ=255) tAC‑GCATCCCACAAAAGCCTGAAAAAAAATGTTCTTTAAGT‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACtttt < 1:29695/141‑1 (MQ=255) c‑GCATCGCCCTCAAGAGAACCAAAAAATATGTTGTAGGC‑GTCATAGAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtcttc < 2:437516/150‑1 (MQ=255) cgcaccgcctcaaaGCCTAAAAAAAAATATGCTGAAAGG‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAActct < 2:585511/136‑1 (MQ=255) gcgacccACTCAACCAGGAGAAAAATTATGCGGTAAGC‑CTCATATAAAAAGCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAAc < 1:420274/138‑1 (MQ=255) cctcccccTCAAGCCTAAAAAAAAATATGCTGAAGGC‑CTAATATAAAAAGCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtcttct < 1:1261077/142‑1 (MQ=255) accGCACTCAGGCCGAAAAAAAAATATGTTGAAAGC‑TACATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtctt < 1:294236/144‑1 (MQ=255) aTCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGa > 1:266415/1‑150 (MQ=255) aTCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGa > 2:222213/1‑150 (MQ=255) cccACCCACGCCTCACAAAAAATAGGCTGTAAGT‑CTAAAAAAAAAACCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGa < 1:47195/146‑1 (MQ=255) cGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc > 2:645678/1‑151 (MQ=255) cGCACCCAACCCTAACAAAAAATATGCTGAAAGG‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAAt < 2:1052245/150‑1 (MQ=255) cGCACACAACCCTAAAAAAAAATTTGTTGTAGGA‑CTCATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc < 1:465208/151‑1 (MQ=255) acccAAGCCTGAAAAAAAATATGCTGAAAGG‑CTAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACtctt < 2:92939/138‑1 (MQ=255) cTCAAGCCTAACAGAAAATAGGCTGTAAGT‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCa < 1:94885/148‑1 (MQ=255) tCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATc > 1:91411/1‑146 (MQ=255) aaGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATccc > 2:1255429/1‑151 (MQ=255) ccTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGAACGGGGTTCGAGGCCTCGATGGCGGGCCAAATTTTCAAAACTCTTCTGAATCAGATCCCCtt > 1:984394/1‑151 (MQ=255) aaaaaaaaaaTATGCTGAAGGC‑CTAATACAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCttat < 1:1270244/145‑1 (MQ=255) aCAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCttatt > 1:1175095/1‑150 (MQ=255) cggAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTtattat > 1:772447/3‑151 (MQ=255) atgaattttgtcTGTAGGC‑CCCAAATCAAACCCCGCCATTAGCTCATCAGGAAGAGCAGACGAAAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCAGAATCAGATCCCCt < 1:932718/134‑1 (MQ=255) aaaaaaaTATGCTGAAGGC‑CTCATAAAAAAACCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCttatt < 1:455074/146‑1 (MQ=255) aaaaaaTAGGCTGTAAGG‑TTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTtattat < 2:1283268/148‑1 (MQ=255) aGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAGAACTCTTCTGAATCAGATCCCCTTATTatc > 2:715709/1‑151 (MQ=255) aGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatc > 2:1263119/1‑151 (MQ=255) aaaaattggatgaaggg‑CACATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatca < 1:335734/136‑1 (MQ=255) aaaaaTAGGCTGAAAGT‑CAAATAAAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatca < 1:781026/150‑1 (MQ=255) aaaaTATGTTGAAAGC‑CTAATACAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTatc < 2:290567/149‑1 (MQ=255) aaTATGTTGTAAGG‑CTCATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATcc < 1:432441/151‑1 (MQ=255) tatGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCt > 1:658853/1‑151 (MQ=255) tatGCTGAAAGG‑CTAATATAAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATccc < 2:241845/150‑1 (MQ=255) tGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGc > 1:587817/1‑151 (MQ=255) tGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaa > 2:481365/1‑150 (MQ=255) tGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaa > 2:1143714/1‑150 (MQ=255) tAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAg > 1:247092/1‑150 (MQ=255) gaaagttcaatatAAAAATCCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCaa < 2:163729/140‑1 (MQ=255) aGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTgg > 2:197144/1‑151 (MQ=255) gg‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTgg > 2:421099/1‑150 (MQ=255) atatCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACAtt > 2:156134/1‑151 (MQ=255) tCAAAAACCGCCATGAGCTCATCAGGGAGAGCAGACGACAACCAGGATTGTTGTATGGAACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGACTCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGcc > 1:1270578/1‑151 (MQ=255) cAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGcc > 2:771322/1‑150 (MQ=255) cAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGcc > 2:1164867/1‑150 (MQ=255) | AAAAATGATCTCATGCAGATGTTTTGTGAATGTGTTGGTTGACATTCATATGAAAAAAATCATAATTCCATCATGTTTGTGTGGGGTCTTTTC‑TGTATCTTAC‑GCATCGCACTCAAGCCTGACAGAAAATATGCTGTAAGG‑CTCATATCAAAAACCGCCATTAGCTCATCAGGAAGAGCAGACGACAACCAGGATTGTTGTATGGTACGGGGTTCGAGGCCTCGATGGCGGTCCAACTTTTCAAAACTCTTCTGAATCAGATCCCCTTATTATCATCCCTGCAAAGTGGAACATTGCC > NC_000913/345180‑345477 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |