Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,084,656 T→G E419A (GAA→GCA)  speA ← biosynthetic arginine decarboxylase, PLP‑binding

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,084,6560TG100.0% 334.6 / NA 86E419A (GAA→GCA) speAbiosynthetic arginine decarboxylase, PLP‑binding
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base G (45/41);  total (45/41)

ACGGTTTTGCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATTCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACACCAGC  >  NC_000913/3084508‑3084799
                                                                                                                                                    |                                                                                                                                               
aCGGTTTTGCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCa                                                                                                                                               <  2:1076254/151‑1 (MQ=255)
     tttGCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGc                                                                                                                                            >  1:548000/1‑149 (MQ=255)
        gCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCagag                                                                                                                                        <  2:340828/150‑1 (MQ=255)
        gCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAgaga                                                                                                                                       <  1:641746/151‑1 (MQ=255)
             tCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGc                                                                                                                                  >  1:95345/1‑151 (MQ=255)
              ccAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGc                                                                                                                                  <  1:876806/150‑1 (MQ=255)
              ccAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCg                                                                                                                                 <  2:1195899/151‑1 (MQ=255)
               cAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCg                                                                                                                                 >  1:739221/1‑150 (MQ=255)
               cAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCg                                                                                                                                 >  1:162179/1‑150 (MQ=255)
                    gctTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGTAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGTTCCAGCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTcc                                                                                                                           <  2:971061/151‑1 (MQ=255)
                    gctTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTcc                                                                                                                           <  2:703308/151‑1 (MQ=255)
                         tGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGtt                                                                                                                      >  2:338478/1‑151 (MQ=255)
                          gCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGtt                                                                                                                      <  2:376471/150‑1 (MQ=255)
                          gCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTc                                                                                                                     <  2:863677/151‑1 (MQ=255)
                            aCTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGt                                                                                                                   <  2:276911/151‑1 (MQ=255)
                            aCTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGt                                                                                                                   >  1:487247/1‑151 (MQ=255)
                               tCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTg                                                                                                                  <  1:980106/149‑1 (MQ=255)
                                 aTGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCAt                                                                                                               >  1:987159/1‑150 (MQ=255)
                                   ggCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCAtct                                                                                                             <  1:1192875/150‑1 (MQ=255)
                                     cacaTGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCt                                                                                                          <  1:434440/151‑1 (MQ=255)
                                      acaTGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTg                                                                                                         >  2:168847/1‑151 (MQ=255)
                                        ttGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGcc                                                                                                       >  1:1150161/2‑151 (MQ=255)
                                        aTGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGcc                                                                                                       >  2:157949/1‑151 (MQ=255)
                                         tGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGcc                                                                                                       >  1:990502/1‑150 (MQ=255)
                                             cAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGtt                                                                                                  >  1:1057395/1‑151 (MQ=255)
                                                 tAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTccc                                                                                              >  2:1143438/1‑151 (MQ=255)
                                                    aGCTGCTCATCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCcac                                                                                            >  1:965389/1‑150 (MQ=255)
                                                     gctgctCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACAt                                                                                          <  1:909060/151‑1 (MQ=255)
                                                           cAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCttt                                                                                     <  2:270242/150‑1 (MQ=255)
                                                           cAGCCCATGCACGCTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCttt                                                                                     <  2:1195959/150‑1 (MQ=255)
                                                               ccATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAgc                                                                                <  2:997016/151‑1 (MQ=255)
                                                                 aTGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAgcgc                                                                              <  2:464701/151‑1 (MQ=255)
                                                                    cACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAgcacgcg                                                                           <  2:643220/151‑1 (MQ=255)
                                                                    cACGTTCTTGCAGGCTAAAGATGACGGAAGAGAAGCCGATATGAATGGCGAACAGATACATCAGACTGGTGTGCAACCTTGAACGCAGAGAACGGCGAGTTGCCGGTTCGGGCATCTCCTGCCAGATTTCCCACATGCTTTGCAgcgc                                                                              >  2:501759/1‑148 (MQ=255)
                                                                            tGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCgcggcg                                                                      <  2:458394/148‑1 (MQ=255)
                                                                              cAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAtct                                                                 >  2:459195/1‑151 (MQ=255)
                                                                               aGGCTAAAGATGCCGGAAGAGTGGCGGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCGCGCATAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAt                                                                   <  2:1043405/148‑1 (MQ=255)
                                                                               aGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAtctt                                                                >  1:1079708/1‑151 (MQ=255)
                                                                               aGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAtctt                                                                <  2:343388/151‑1 (MQ=255)
                                                                                 gCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAtcttct                                                              >  1:1027940/1‑151 (MQ=255)
                                                                                 gCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCAtcttct                                                              <  2:30737/151‑1 (MQ=255)
                                                                                    aaaGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGc                                                            >  2:224584/1‑150 (MQ=255)
                                                                                      aGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAgg                                                         <  2:320613/151‑1 (MQ=255)
                                                                                        aTGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAgg                                                         >  2:67468/1‑149 (MQ=255)
                                                                                        aTGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGgcg                                                       >  2:653276/1‑151 (MQ=255)
                                                                                        aTGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGgcg                                                       <  2:322233/151‑1 (MQ=255)
                                                                                        aTGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGgcg                                                       >  2:817820/1‑151 (MQ=255)
                                                                                        aTGCCGGAAGAGTAGCCGATATGAATATCGTGCATATCTATTTGACTGGCGTGTAACCATGCACGCAGATAACGCAAAATTCCCGGTTAGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGgc                                                        >  2:44530/1‑150 (MQ=255)
                                                                                           ccGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCgg                                                    <  1:105512/151‑1 (MQ=255)
                                                                                             ggAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTc                                                  >  1:892586/1‑151 (MQ=255)
                                                                                             ggAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTc                                                  >  2:724573/1‑151 (MQ=255)
                                                                                             ggAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTc                                                  >  2:402189/1‑151 (MQ=255)
                                                                                             ggAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTc                                                  <  2:224605/151‑1 (MQ=255)
                                                                                              gAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCg                                                 <  1:879515/151‑1 (MQ=255)
                                                                                                 gagTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCa                                              <  2:95034/151‑1 (MQ=255)
                                                                                                   gTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCAcc                                            <  2:1115967/151‑1 (MQ=255)
                                                                                                     aGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCg                                           >  1:778293/1‑150 (MQ=255)
                                                                                                       ccGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCgtgt                                        <  2:857638/151‑1 (MQ=255)
                                                                                                       ccGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCgtgt                                        <  2:378628/151‑1 (MQ=255)
                                                                                                        cGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCgtgt                                        >  2:1176140/1‑150 (MQ=255)
                                                                                                        cGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCgtgt                                        >  1:825414/1‑150 (MQ=255)
                                                                                                        cGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCgtgt                                        >  2:591176/1‑150 (MQ=255)
                                                                                                          atatGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTAtt                                     >  1:354864/1‑151 (MQ=255)
                                                                                                           tatGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTAtt                                     <  1:158766/150‑1 (MQ=255)
                                                                                                            atGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCg                                   >  1:837253/1‑151 (MQ=255)
                                                                                                             tGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGt                                  >  1:1029515/1‑151 (MQ=255)
                                                                                                               aaTGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGtt                                 >  2:915031/1‑150 (MQ=255)
                                                                                                                aTGTCGTGCAGATCCATCTGACTGTCGTGTAGCCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTAc                               <  1:1070883/151‑1 (MQ=255)
                                                                                                                 tGTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACg                              >  1:1210621/1‑151 (MQ=255)
                                                                                                                  gTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGt                             <  1:538944/151‑1 (MQ=255)
                                                                                                                  gTCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGt                             <  1:233963/151‑1 (MQ=255)
                                                                                                                   tCGTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGtt                            >  1:415954/1‑151 (MQ=255)
                                                                                                                     gTGCAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTcc                          <  1:60747/151‑1 (MQ=255)
                                                                                                                        cAGATCCATCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACg                       >  2:681454/1‑151 (MQ=255)
                                                                                                                               aTCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCg                    <  1:283038/147‑1 (MQ=255)
                                                                                                                               aTCTGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCCCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGCGTATTCGTTACGTTCCACGCCg                    >  1:1035886/1‑147 (MQ=255)
                                                                                                                                  tGACTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGatat             >  2:9004/1‑151 (MQ=255)
                                                                                                                                    aCTGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGATTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATAtt            >  1:412532/1‑150 (MQ=255)
                                                                                                                                      tGTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATAtt            >  2:155004/1‑148 (MQ=255)
                                                                                                                                       gTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAg          <  2:987093/149‑1 (MQ=255)
                                                                                                                                       gTCGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGa         <  2:1021304/150‑1 (MQ=255)
                                                                                                                                         cGTGTAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGacac      >  2:1062857/1‑151 (MQ=255)
                                                                                                                                          gtgtAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACAcc     >  1:417515/1‑151 (MQ=255)
                                                                                                                                           tgtAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACAcc     >  2:930829/1‑150 (MQ=255)
                                                                                                                                             tAACCATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACACCAGc  >  1:702432/1‑151 (MQ=255)
                                                                                                                                                ccATGCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACACCAGc  <  2:1035574/148‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
ACGGTTTTGCGGATCCAGCTGCTTTTGCACTTCATGGCACATGCTCAAATAAAGCTGCTCAGCCCATGCACGTTCTTGCAGGCTAAAGATGCCGGAAGAGTAGCCGATATGAATGTCGTGCAGATCCATCTGACTGTCGTGTAACCATTCACGCAGAGAACGGCGAGTTCCCGGTTCGTGCATCTCCTGCCAGGTTTCCCACATGCTTTGCAGCGCGCGCGGCGCATCTTCTGCAGGCGCGGTCGGCACCGTGTATTCGTTACGTTCCACGCCGATGATATTAGACACCAGC  >  NC_000913/3084508‑3084799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: