New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2818357 | 0 (0.000) | 36 (0.510) | 17/258 | 6.6 | 100% | intergenic (‑83/+116) | argY/argV | tRNA‑Arg/tRNA‑Arg |
? | NC_000913 | 2818492 = | 0 (0.000) | noncoding (58/77 nt) | argV | tRNA‑Arg | |||||
Rejected: Coverage evenness skew score above cutoff. |
AAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCGGCCACCTC > NC_000913/2818458‑2818642 | atatcaagtaagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATAGTCCCtt < 2:238311/137‑1 (MQ=18) tcaagtaagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAg < 1:291636/139‑1 (MQ=255) caagtaagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑a < 1:455826/141‑1 (MQ=255) taagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGGTT‑TGGACCCCGGATGCAGCTTTTTACCGCATACTCCCTTTGC‑Agggg > 1:812223/7‑151 (MQ=18) aagagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑Agggg < 1:382698/145‑1 (MQ=255) agagatGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑TGAACCCCCGGCGCAGCCTTTGACCACCTAATCCCCTAAC‑Agggg > 2:630070/5‑149 (MQ=17) ggTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCt < 2:1058343/150‑1 (MQ=255) tGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGGTT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGGGCGCCTTc > 1:384455/1‑150 (MQ=255) cATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGGTTCCGAACCCAGG‑TGCCGGTTTTTACCGCCTACCCCCCTACCAAGGGGGGCGCCt > 2:1047489/1‑147 (MQ=17) aTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCCGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGGGCGCCCTCAGcc > 1:206389/1‑151 (MQ=255) ccGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCctc < 1:985936/151‑1 (MQ=255) ggaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCg < 1:620138/151‑1 (MQ=255) gaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCgg < 1:512509/151‑1 (MQ=255) ggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCGGcc < 1:788311/151‑1 (MQ=255) cGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCGGCCACCt < 2:654815/150‑1 (MQ=255) cGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCGGCCACCTc < 1:1134264/151‑1 (MQ=255) | AAAGTACGTAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCAAATGGCGGTGAGGCGGGGATT‑CGAACCCCGGATGCAGCTTTTGACCGCATACTCCCTTAGC‑AGGGGAGCGCCTTCAGCCTCTCGGCCACCTC > NC_000913/2818458‑2818642 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |