| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,604,344 | 0 | C | T | 40.0% | 69.4 / 29.8 | 62 | S62F (TCT→TTT) | bglJ | bgl operon transcriptional activator |
| Reads supporting (aligned to +/- strand): ref base C (9/27); new base T (24/0); total (35/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 | |||||||||||
TAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGG > NC_000913/4604200‑4604490 | tAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAt‑ttttttttttt > 1:416411/1‑150 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAt‑ttttttttttttt > 2:327794/1‑149 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑tttttctttttc < 1:246252/150‑1 (MQ=255) aGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑Tttttctttttct < 1:1149593/151‑1 (MQ=255) aaaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAt‑ttttttttttttt > 2:596086/1‑146 (MQ=255) aaaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGcc < 2:924915/151‑1 (MQ=255) aaaggcggtaTGAGTATTAACGGTATTGAGATTTTATTAAGAAAGTTTGCAGGTAACCTTAATAGGCTCAATGACTAAACGGGTTTGGTTTCTTTTCACGATACCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTGTTTCTGcgg < 2:1097496/142‑3 (MQ=255) aaaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCTt‑ttttttttttttt > 2:440400/1‑145 (MQ=255) aaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCAt < 2:704204/151‑1 (MQ=255) aaTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCAt < 2:1019184/151‑1 (MQ=255) aTGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGGCCT‑TTTTTCTTTTTTTGCCAt > 1:190193/1‑150 (MQ=255) aTGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGt < 2:1140220/150‑1 (MQ=255) gAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAg < 2:1014303/151‑1 (MQ=255) tagtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAA‑ttttttttttttttcc > 2:982321/1‑131 (MQ=255) agtaTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTATTTTTTTTCCATGAGAAGTGAgcg > 1:1173802/1‑149 (MQ=255) taTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCag < 2:786096/150‑1 (MQ=255) aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCagag < 1:437737/151‑1 (MQ=255) aTCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCaga < 2:924801/150‑1 (MQ=255) cGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCT‑TTTTTCTTTTTTTTCCGTGGAAAAGGAGCGCggag > 1:1134287/1‑149 (MQ=255) cGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTTCCTGAGAAGTGAGCGCag > 2:58292/1‑147 (MQ=255) ggTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTGAT‑TTTTTTTTTTTTTTCCATGAGGAGGGTGCggagggag > 2:23823/1‑150 (MQ=255) ggTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTTTTCCATGAGAAGTGAGCGCAGGGAgg > 1:1190526/1‑151 (MQ=255) gagaGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTAt < 1:583177/151‑1 (MQ=255) tATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTAT‑TTTTTTTTTTTTTTTCATTAGGAGTGGAGGCGGAGAgggggtatttt > 2:513173/1‑139 (MQ=255) aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCct < 2:806826/150‑1 (MQ=255) aTTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCct < 1:875695/150‑1 (MQ=255) aGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCTATTTTTAATTTTTTGCCTTCAG‑AGGGAGCGCGGAGGGGGATTGTC‑TTGGctgcacg > 1:1277435/1‑147 (MQ=255) gAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTAT‑TTTTTTTTTTTTTGCCATGAGAAGTGAGCGCAGGGAGGGATTATC‑ttttcttact > 1:397854/1‑141 (MQ=255) aaaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCctgactga < 2:1257967/150‑1 (MQ=255) aaGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCATCAGAAGAGAGCGGCAAGAGGGGCTATC‑TTTCcttactg > 2:194603/1‑148 (MQ=255) aGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTCCCTGAGAAGTGGGCGCAGGGAGGGGTTATC‑TTTCCTGACTGGACt > 2:1022422/1‑151 (MQ=255) gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTCCCTGAGAAGGGAGGGCAGAGAGGGGTTATT‑TTGCctgact > 1:213572/1‑145 (MQ=255) gTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTCCATGAGAAGGGAGCGCAGAGAGGGGTTATT‑TTGCCTGACTGaa > 1:770292/1‑148 (MQ=255) gggTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGAtt < 1:709921/151‑1 (MQ=255) gTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGCCAT‑TTTTTTTTTTTTTGCCCTTGGAAGGGAGGGGCCGGGGGGATTATCATTCCCTG‑CTGAACTGGCgggt > 2:677557/1‑146 (MQ=255) cccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGttt < 2:941064/151‑1 (MQ=255) ccTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTCG‑TTTTTTTTTTTCTGGCCAGAGAAGGGAGGGCACAGGGGGATTATG‑TTGTCTTTATTTACTGGCGATTAAgct > 2:2227/1‑147 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTGATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTcc < 1:233742/149‑1 (MQ=255) tataAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTCCCTGAGAAGTGAGCGCAGAGAGGGGTTATC‑TTGCCTGACTGAAATGGCGGTTAAGttttc > 1:376714/1‑147 (MQ=255) taAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCCTGAGGAGGGAGCGCCGAGAGGGGTTTTT‑TTTCCTGACTGAACTGGCGATTAAGTTTCcg > 1:639572/1‑148 (MQ=255) gCTCCATACCTGTACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCT‑TTTTTTTTTTTTTTCCCTGAGAAGGGAGCGCCGAGAGGGGTTATT‑TTTCCTGACTGAACTGGCGATTAAGTTTTCGCGGAcc > 1:26184/1‑151 (MQ=255) gCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTAcc < 1:829233/151‑1 (MQ=255) cATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCCTGAGAAGTGAGGGCAGAGGGGGGTTATT‑TTTCCTGACTGAACTGGGGGTTAAGTTTTcgcggaacc > 2:930972/1‑143 (MQ=255) ccTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGttt < 1:268028/151‑1 (MQ=255) aCCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTa < 2:822629/151‑1 (MQ=255) ccAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTAt < 1:488651/151‑1 (MQ=255) aGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTg < 1:639250/151‑1 (MQ=255) gTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGc < 1:408404/151‑1 (MQ=255) tCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTTCCATGCGGAGTGAGCGCCGAGAGGGGTTATT‑TTTCCTGACTGAACCTGCGGTTAAGTTTCCGCCTACCCCGCGTTTTGTTTTTGCg > 1:663196/1‑151 (MQ=255) gAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCATGAGAAGTGGGCGCAGAGAGGGGTTATC‑TTGCCTGACTGAAATGGCGATTAAGTTTTCGCGTACCCCGCGTTTTGTTATTGCggg > 1:620451/1‑148 (MQ=255) gTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCATGTGAAGTGAGGGCGGAGGGGGGTTATC‑TTGCCTGACTTAACTGGCGAGTAAGTTTTCGCGTTCCCCGCGCTTTGTTTTTGCgggt > 1:55531/1‑146 (MQ=255) aTTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCATGAGAAGTGAGCGCCGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGGTTAAGTTTCCGCGTACCCCGCGGTTAGTTATTTCGggtgatg > 1:683905/1‑149 (MQ=255) tCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCCT‑TTTTTTTTTTTTTGCCCTGAGGAGTGAGCGCAGAGAGGGATTATC‑TTGTCTGACTGAACTGGGGATTAAGTTTTCCCGTACCCGGGGCTTTGTTATTTCGGGTGATGATAtt > 1:1159192/1‑151 (MQ=255) acAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTTAT‑TTTTTTTTTTTTTGCCCTTAGGAGGGGGGGCCTGGAGGGATTTTC‑TTTGCTGACCTAAATGGCGGTTAAGTTTTCGCGTCACCGGCGGTTTGTTATTTCGGATGGTGAAAtt > 1:865573/2‑151 (MQ=255) cATGTCGCGGATCTCGTTTGCGGCGGTCCT‑TTTTTTTTTTTCTGCCATGGGAAGGGTGTGCTGGGAGGGATTTTC‑TTGCCTGACTGAATTGGCGGTTAAGTTTCCGCGTACCAGGGGTTTCGGTATTTTGGATGTTGATTTTGTAGTTc > 1:135433/1‑149 (MQ=255) aTGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGc < 1:338614/151‑1 (MQ=255) gTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTg < 1:567635/151‑1 (MQ=255) gcgGATCTCGTTTGCGGCGGTCAT‑TTTTTTTTTTTTTGCCCTGAGAAGGGAGGGCAGAGAGGGGTTTTC‑TTTCCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCCGCGTTTTGTTTTTTCGGGTGATGATATTTAAGCTCGGCTggt > 2:923749/1‑148 (MQ=255) ctcGTTTGCGGCGGTCAT‑TTTTTTTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGGTTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCCGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGtt > 1:1107106/1‑149 (MQ=255) cGTTTGCGGCGGTCAT‑TTTTTCTTTTTTTGCCATGAGGAGAGAGCGGGCGGAGGGGTTATC‑TTTGCTTAATGTACTGGCGGTTTAGTTTCCGCGGAACCCGCGTCTTGTTATTGCGGGTGATGTTATTGAAGATCgcgcggttggtgtctt > 2:437912/1‑136 (MQ=255) cGTTTGCGGCCGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCGGAGAGGGATTATC‑TTGCCTGAGTGAACTGGCGATTAAGTTTCCGCGTTCCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTTATTGGTTCa < 2:1151825/149‑1 (MQ=255) gTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTg < 1:244919/151‑1 (MQ=255) tGCGGCGGTCAT‑TTTTTTTTTTTTTTCCCTGCGAAGTGAGCGCAGAGGGGGGTTTTC‑TTTCCTGACTGAACTGGCGATTAAGTTTTCGCGTACCCGGCGGTTAGTTATTGCGGGTGATGATATTTAAGCTCGGCTGGTTGGGTTATTGt > 2:804299/1‑149 (MQ=255) gcggcgGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGGTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCg < 2:971657/150‑1 (MQ=255) ggTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATc > 1:296951/1‑150 (MQ=255) taT‑TTTTTCTTTTTCTGCGATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCTTGTCTGAACTGGCGGTTAAGTTTCCGCGTCCCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCg > 2:292691/2‑151 (MQ=255) cAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCg > 1:607343/1‑151 (MQ=255) cAT‑TTTTTCTTTTTCTGCCATGAGAAGAGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCAcc > 2:755754/1‑150 (MQ=255) t‑tttttCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCTTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCTTTGTCGCCATCAc > 2:493020/1‑147 (MQ=255) ttctttttctGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCGTCACCGCTgg > 2:528737/1‑149 (MQ=255) | TAGAAAAATGCGTCATGAGTAGTATCGGTATTGAGAGTTTATTCAGAAAGTTTGCGGGTAACCCTTATAAGCTCCATACCTATACCAGTCAGGAGTCATTTCAGGATGCCATGTCGCGGATCTCGTTTGCGGCGGTCAT‑TTTTTCTTTTTCTGCCATGAGAAGTGAGCGCAGAGAGGGATTATC‑TTGCCTGACTGAACTGGCGATTAAGTTTCCGCGTACCCGGCGTTTAGTTATTGCGGATGATGATATTGAAGCTCGGCTGATTGGTTCATTGTCGCCATCACCGCTGG > NC_000913/4604200‑4604490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |