Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091329,4960TA45.4% 161.2 / 90.5 130intergenic (+301/‑155)dapB/carAdihydrodipicolinate reductase/carbamoyl phosphate synthetase small subunit, glutamine amidotransferase
Reads supporting (aligned to +/- strand):  ref base T (63/8);  new base A (0/59);  total (63/67)
Fisher's exact test for biased strand distribution p-value = 1.28e-28
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 143 total aligned reads displayed.

TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGGG  >  NC_000913/29346‑29646
                                                                                                                                                        |                                                                                                                                                      
tttAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAatat                                                                                                                                                        >  2:681814/1‑151 (MQ=255)
     tGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATaaaa                                                                                                                                                    >  1:636226/1‑150 (MQ=255)
       tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAT‑ATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                                 >  2:1181493/1‑151 (MQ=255)
       tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATaaaaaa                                                                                                                                                  <  1:1338845/150‑1 (MQ=255)
       tAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                                 >  1:985068/1‑151 (MQ=255)
        aaaTTTTGGCCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAAt                                                                                                                                                 <  2:2024578/150‑1 (MQ=255)
          aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                              <  2:388165/151‑1 (MQ=255)
          aTTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATccc                                                                                                                                              >  1:411928/1‑151 (MQ=255)
             ttGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGcc                                                                                                                                           >  1:1589372/1‑151 (MQ=255)
                  cATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCACCATTa                                                                                                                                       >  2:496445/1‑150 (MQ=255)
                       ggTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTg                                                                                                                                  >  2:324678/1‑150 (MQ=255)
                          ccACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtt                                                                                                                              >  2:253289/1‑151 (MQ=255)
                          ccACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtt                                                                                                                              >  2:344523/1‑151 (MQ=255)
                           cACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACttt                                                                                                                             >  1:380624/1‑151 (MQ=255)
                           cACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACttt                                                                                                                             >  2:715394/1‑151 (MQ=255)
                             cTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACtttt                                                                                                                            >  2:877263/1‑150 (MQ=255)
                               tttttCTGCTCTTTTTTTTTTCATGCATTTTTCTTGCTGCGCAAGCTTTTTCAAAAACGGTTT‑AGATGTTTTTTTTGTCGTTTAATGCTTGAAAAAC‑ATGAATGAGCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAg                                                                                                                          <  2:168943/150‑1 (MQ=255)
                                ttttCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcg                                                                                                                        >  1:480044/1‑151 (MQ=255)
                                 tttCTGCTTTTTTTTTTTTCATGAATTCTTTTTGTTGCGCAAGCGTTTTCCAAAAGAGTTT‑AGATAATTTTTTTGTCGATTAATGCCTTAAAAAC‑ATGCAGGACCCAAAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAgcg                                                                                                                        <  2:1063071/150‑1 (MQ=255)
                                           tttttATTTCATGCATTTTTTTTGCTGCGCAAGCTTTTCCAAAAAAAGTTT‑AGATGTTTTTTTTGTCGTTTAATCCTTAAAAAAC‑ATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCatat                                                                                                                 <  2:191187/147‑1 (MQ=255)
                                           tttttATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                             >  1:1269754/1‑151 (MQ=255)
                                            ttttttttCATGAATTCTTCTTGCGGCGCAGGCGTTTTCAAGAACTGGTT‑AAATTATCTTTTTGCCGCTAAATCCCTAAAAACC‑ATGCATGCCCCAAAAAAAAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTcc                                                                                                             <  2:713762/150‑1 (MQ=255)
                                             ttttttTCATGAAATCTTCTTGCTGCGCAAGTTTTTTCAAAAACAGGTT‑AGATAATTTTTTTGTCGTTAAATGCCTAAAAAAC‑ATGCTGGGCCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCa                                                                                                            <  1:243548/150‑1 (MQ=255)
                                               tATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGa                                                                                                          >  1:1310108/1‑150 (MQ=255)
                                                  ttaatccattcttctTGCGGCACAGTCTTTTACAAAAAAAGTTA‑AGATTTTTTTTTTGTCGCTAAATCCCTAAAAAAC‑AGGCATGACCCAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATg                                                                                                       <  1:1986775/141‑1 (MQ=255)
                                                  ttCATGCATTTTTCTGGCTCCCAAGGTTTTTTCCAAAAAGGGTT‑AAATGTTCTTTTTGTCTTTAAATGCCTGAAAAAC‑ATGCAGGACCCAAAAAATATTAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAAt                                                                                                        <  2:461245/149‑1 (MQ=255)
                                                     ataaatttttcttGCTGCGCAACCGTTTTCCAAATTGGATG‑AAAGGATTTTTTTCTCGTATAACGCCAAAAAAAC‑ATGCAGGCGCAAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccg                                                                                                    <  2:1471767/142‑1 (MQ=255)
                                                     aTGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATgccgc                                                                                                   >  1:165376/1‑151 (MQ=255)
                                                             ttcttGCTGCGCAAGCTTTTTCAAAAACAGTTT‑AGATGTTTTTTTTGTCGTTAAATGCTTAAAAAAC‑ATGCATGACCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGttt                                                                                              <  2:1487392/148‑1 (MQ=255)
                                                              tcttGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGcc                                                                                           >  1:926783/1‑150 (MQ=255)
                                                                ttGCTGCGAAGGCTTTTCCAAGAACAGGTT‑AGATTATTTTTTTTTCGTTAATTGCCTGAAAAAC‑AGGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGccgccg                                                                                                 <  2:1740006/142‑1 (MQ=255)
                                                                 tgctgcG‑AAGGCTTTTCAAAAAAGGGTTAAGATGGTTTTTTTGTCATTTAATGCTTATAAAAC‑ATGCATGGGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAg                                                                                         <  2:1142852/149‑1 (MQ=255)
                                                                   ctgcGCAAGCGTTTTCAAGAACAGGTT‑AGATGATTTTTTTGTCGCTTAATGCCTGAAAAAC‑ATGCATGACCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGaa                                                                                       <  2:47499/149‑1 (MQ=255)
                                                                        cAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                                >  1:1612518/1‑151 (MQ=255)
                                                                         aatcttttcCCAGAAAAGTTT‑AAATTTTTTTTTTTTCTCTTAGTCCCTAAAAAAC‑ATTAATGAGCAAAAAAAAAATAAAAAAACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtc                                                                                   <  1:1394923/142‑1 (MQ=255)
                                                                         aaGCTTTTCCAAAAAAAGGTT‑AGATGTTTTTTTTTTCTTTTAATGCTTATAAAAC‑ATGCATGAGCAAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcg                                                                                  <  2:592058/148‑1 (MQ=255)
                                                                          agacttttCCCAAAAAGGTTAAGATGATTTTTTTGTCGATTATTCCCGGAAAAAC‑TGCCAGGAGCCACAAAATAATAAAAAAATTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATtcgtc                                                                                <  2:1271730/146‑1 (MQ=255)
                                                                              ttttCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAACAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGt                                                                             >  1:1940193/1‑148 (MQ=255)
                                                                              ttttCAAAAACGGGTT‑AGATGTTCTTTTTGTCTATAAATCCCTAAAAAAC‑ATGCAGGACCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                            <  2:1403897/149‑1 (MQ=255)
                                                                              tttccaaaaaCAGGTT‑AGATGTTTTTTTTGTCGTTTAATCCCTGAAAAAC‑ATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCgg                                                                              <  2:497555/139‑1 (MQ=255)
                                                                              tttccaaaaaCAGGTT‑AGATGTTCTTTTTGTCGTTAAATGCCTAAAAAAC‑ATGCATGGCCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTa                                                                            <  2:100957/141‑1 (MQ=255)
                                                                               tttCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                         >  1:73962/1‑151 (MQ=255)
                                                                                  ccAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                         >  1:868731/1‑148 (MQ=255)
                                                                                  ccAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGc                                                                         >  2:1360568/1‑148 (MQ=255)
                                                                                    aGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                                    >  2:212062/1‑151 (MQ=255)
                                                                                    aGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAtt                                                                    >  1:1519131/1‑151 (MQ=255)
                                                                                      aaaagttt‑AGATTTTTTTTTGGTCGTTAATTGCCTAAAAAAC‑ATGCAGGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTg                                                                  <  1:1181458/145‑1 (MQ=255)
                                                                                      aaCAGTTT‑GAATGATTTTTTTGTCTTTAAAGGCTTGAAAAAC‑ATGCGTGGGCAAAAAAAAAAAAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                                   <  2:1890197/150‑1 (MQ=255)
                                                                                      aaCAGTTT‑AGATTATTTTTTTGCCGCTTAATGCCTAAAAAAC‑ATGCATGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGAttt                                                                   <  2:1269791/150‑1 (MQ=255)
                                                                                            tt‑AGTTTATTTTTTTTTCGCTTAATGCCTGAAAAAT‑AGGCTTGCACCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCAtt                                                              <  2:1470009/149‑1 (MQ=255)
                                                                                            tt‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTg                                                             >  1:222965/1‑150 (MQ=255)
                                                                                             t‑AGATGATCCTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGAt                                                           >  1:537882/1‑151 (MQ=255)
                                                                                               aGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                            <  2:2026120/149‑1 (MQ=255)
                                                                                                  tgatCTTTTTGTCGTTTAATGCCTGAAAAAC‑AGGCATGAGCCAAAAAATAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                            <  2:1120438/146‑1 (MQ=255)
                                                                                                     tttttttGTCGTTTAATGCCTGAAAAAC‑ATGCATGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                            <  2:92044/141‑1 (MQ=255)
                                                                                                     tcttttggccatttAATGCCTGAAAAAC‑ATCCTTGGCCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGa                                                            <  2:802923/131‑1 (MQ=255)
                                                                                                       tttttGTCTTTAAATGCTTAAAAAAC‑AGCAAAGAGCCAAAAAATAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtca                                                   <  1:392056/150‑1 (MQ=255)
                                                                                                         tttGTCTTTTAATCCCTGAAAAAC‑ATGCATGACCCAAAAAATAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                                 <  1:153384/150‑1 (MQ=255)
                                                                                                         tttGTCGTTTAAT‑CCTTTAAAACAATCCATGACCAAAAAAAAAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGtcatc                                                 <  2:1671872/150‑1 (MQ=255)
                                                                                                                 ttattccctaaaaaaC‑ATGCATGGCCAAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATtg                                             <  2:1436833/135‑1 (MQ=255)
                                                                                                                 ttAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                                        >  2:548913/1‑151 (MQ=255)
                                                                                                                  tAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAtt                                       >  2:1558424/1‑151 (MQ=255)
                                                                                                                   aatgcgtaaaaaaC‑ATGCAGGCCCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGaa                                         <  2:1117245/139‑1 (MQ=255)
                                                                                                                   aaTGCCTGAAAAAC‑ATGCAGGACCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTa                                      <  2:189961/151‑1 (MQ=255)
                                                                                                                   aaTGCCTAAAAAAC‑AGTCAGGACCCAAAAAATAAAAAAAAAACTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGaa                                         <  1:1291292/148‑1 (MQ=255)
                                                                                                                    aTGTCTGAAAAAC‑GTGCATGACCCAAAAAATAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAAt                                        <  1:1099212/148‑1 (MQ=255)
                                                                                                                     tGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAat                                    >  2:805399/1‑151 (MQ=255)
                                                                                                                         tGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGc                                >  2:1952883/1‑151 (MQ=255)
                                                                                                                           aaaaaC‑ATGCATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATg                                 <  2:2021871/147‑1 (MQ=255)
                                                                                                                            aaaaC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCaa                              >  1:11277/1‑150 (MQ=255)
                                                                                                                            aaaaC‑ATGAATGACCCAAAAAAAAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGc                                <  2:52610/148‑1 (MQ=255)
                                                                                                                              aaC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAAt                            >  1:1825264/1‑150 (MQ=255)
                                                                                                                               aatgggaataaGCCAAAAAAAAATAAAAAAATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATa                           <  2:382912/141‑1 (MQ=255)
                                                                                                                                 caggcatgACCAAAAAAAAAAAAAAAAAAACACCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa                         <  1:1551672/148‑1 (MQ=255)
                                                                                                                                   tgcatgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagt                       >  2:1299437/1‑151 (MQ=255)
                                                                                                                                   tgcatgACCCAAAAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa                         <  1:76517/149‑1 (MQ=255)
                                                                                                                                    gcatgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg                      >  1:608753/1‑151 (MQ=255)
                                                                                                                                      atgAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtg                      >  2:900557/1‑149 (MQ=255)
                                                                                                                                      aggaccaaaaaaaaaaaaaaaaaACCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgag                    <  1:1828194/142‑1 (MQ=255)
                                                                                                                                       agAGCCAAAAAAAAATAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATaaa                         <  1:28462/144‑1 (MQ=255)
                                                                                                                                         aacaaaaaaaTAAAAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagt                   <  1:2042398/143‑1 (MQ=255)
                                                                                                                                          cccAAAAAAAAAAAAAAAAATCCCCGCCATTAAGTTG‑CCTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                  <  2:1395038/147‑1 (MQ=255)
                                                                                                                                            cacaAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat               >  1:101424/1‑150 (MQ=255)
                                                                                                                                             acaAAAAAAAAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                  <  2:681227/146‑1 (MQ=255)
                                                                                                                                             aaaaaaaaaaaaaaaaaaCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAagtgagtg                  <  1:1901617/144‑1 (MQ=255)
                                                                                                                                             aaaaaaTAATAAAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAata              <  2:2073054/148‑1 (MQ=255)
                                                                                                                                              caAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACTTCATCATTGTGAATTAATATGCAAATAAAGCGAGTGAATAtt            >  1:1060977/1‑151 (MQ=255)
                                                                                                                                               aaaaaaaaaaaaaaATCCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAat               <  1:738252/147‑1 (MQ=255)
                                                                                                                                                aaaaaaTAAAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          <  1:993738/151‑1 (MQ=255)
                                                                                                                                                aaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          >  1:671861/1‑151 (MQ=255)
                                                                                                                                                aaaTAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          >  1:496947/1‑151 (MQ=255)
                                                                                                                                                aaaTAAGAAAAAAAGTCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtct          <  1:2095561/151‑1 (MQ=255)
                                                                                                                                                 aataatATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATtctc         >  2:1660504/1‑151 (MQ=255)
                                                                                                                                                  ataataTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGAGAGTGAATATTctct        >  2:1811213/1‑151 (MQ=255)
                                                                                                                                                    aataTAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAAGATGCAAATAAAGTGAGTGAATATTCTCTgg      >  2:1146109/1‑151 (MQ=255)
                                                                                                                                                     atatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg      >  1:505779/1‑150 (MQ=255)
                                                                                                                                                     atatAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg      >  2:864442/1‑150 (MQ=255)
                                                                                                                                                     ataaAAAAAACCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGa     <  1:1662639/151‑1 (MQ=255)
                                                                                                                                                      tataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTgg      >  2:712530/1‑149 (MQ=255)
                                                                                                                                                       ataAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAGTAAAGTGAGTGAATATTCTCTGGAgg   >  1:1846326/1‑151 (MQ=255)
                                                                                                                                                        |                                                                                                                                                      
TTTAATGTAAATTTTGACCATTTGGTCCACTTTTTTCTGCTCGTTTTTATTTCATGCAATCTTCTTGCTGCGCAAGCGTTTTCCAGAACAGGTT‑AGATGATCTTTTTGTCGCTTAATGCCTGTAAAAC‑ATGCATGAGCCACAAAATAATATAAAAAATCCCGCCATTAAGTTGACTTTTAGCGCCCATATCTCCAGAATGCCGCCGTTTGCCAGAAATTCGTCGGTAAGCAGATTTGCATTGATTTACGTCATCATTGTGAATTAATATGCAAATAAAGTGAGTGAATATTCTCTGGAGGG  >  NC_000913/29346‑29646

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑