| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,177,531 | 0 | A | C | 44.9% | 133.3 / 18.9 | 91 | V127G (GTG→GGG) | nudF | ADP‑ribose pyrophosphatase |
| Reads supporting (aligned to +/- strand): ref base A (32/17); new base C (0/40); total (32/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.85e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCTGTTCCCGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATC > NC_000913/3177384‑3177674 | gCCTGTTCCCGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CAcc < 2:767913/150‑1 (MQ=255) gTTCCCGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGttt < 1:835005/151‑1 (MQ=255) gTTCCCGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGtt < 1:63324/150‑1 (MQ=255) cccGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGt < 2:284963/151‑1 (MQ=255) cGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTcc < 2:1134876/151‑1 (MQ=255) ggCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCg < 2:242398/151‑1 (MQ=255) ggCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCg > 2:911928/1‑151 (MQ=255) gCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGt < 2:47134/151‑1 (MQ=255) cTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGtt > 1:478755/1‑151 (MQ=255) ttACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGttt > 1:213874/1‑151 (MQ=255) aCCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTg < 2:904455/150‑1 (MQ=255) caTGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTa < 1:105661/150‑1 (MQ=255) aTGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATc > 2:762823/1‑151 (MQ=255) gAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑a < 2:489843/150‑1 (MQ=255) aaCGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGt > 1:905102/1‑151 (MQ=255) aaCGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGt > 1:862833/1‑151 (MQ=255) gcgAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTccc < 2:5773/151‑1 (MQ=255) gcgAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGATTGACTATC‑AGTcc > 2:936120/1‑150 (MQ=255) cgAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTccc < 1:1092640/150‑1 (MQ=255) cgAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCg > 2:430051/1‑151 (MQ=255) atatCTTCGTTTTCATCAGCCAGCCCGTGAATACCGCTTGCGGTCGTGGCGTCCCCTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCct < 1:462241/151‑1 (MQ=255) atCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCctct > 2:359235/1‑151 (MQ=255) tCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCa > 1:796269/1‑150 (MQ=255) ttttCACCCCCCAGCCCGTAAATCCCGCTTGCGGTCGGGGCGCCCCCTTCGCCCCCCATAATT‑GACGAACCCTCACTGGTCCCCCCCGGGCTTGCCAGGAAACTTAA‑CCCGGTTTTGGTCCTTTTGACTATC‑AGTCCCGCCTCTTCAAt < 1:81689/149‑1 (MQ=255) ttttCACCACCAAGCCCGTGAATCCCGTTGGGGGTGTGGGCGCCCCCTCCCCCCCCAATATTT‑AACAAACCCTCGCTGGTCCCCCCCGGGCTGGCCAGAAACCTTAC‑CCCCGGTTTGGTCCTTTTGACTATC‑AGTCCCGCctct < 1:1006313/144‑1 (MQ=255) accgccgagcccttGAATCCCGCTGGCGGGCGTGGCCTCCACCCCGCCCACCATATTT‑GACGACGCCTCACTGGTGCCCCCGGGGTTGGCCAGGATATTGAA‑CCCCGTTTCGGTCCGTTTAACTATC‑AGGCCCGCCTCTTCAATCGCTTc < 2:878507/137‑1 (MQ=255) ccgccaaaaCCGTGAACCCCGCGTGGGGTGGGGGGGTCAACTCCCCCCACAATAATT‑GCCGAGCCCTCTTGGGTGCCCCCCGGGCTTGCTAGGAAACTTAC‑CCCCGGTTGGTTCGGTTTGTCGAGC‑CGTCCCGCCTCTTCAATCGCTTcg < 1:969815/142‑1 (MQ=255) ccgCCAGCCCGTAAATCCCGTTTGGGGCGGGGGCCCCCCCTCCCCCCCCCATAATT‑GACGACCGCTCACTGGGCCCCCCCGGGTTGGCCAGGAAACTTAA‑CCCCGTTTTGGTCCGTTTGACTATA‑AGTCCCGCCTCTTCAATCGCt < 1:688802/144‑1 (MQ=255) gCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGa > 2:832026/1‑150 (MQ=255) ccaccccGTAAATCCCGTTGGCGGTCGTGGCGCCCCCTCCGCCCCCCATAATT‑GACGACCGCTCACTGGTCCCCCCCGGGTTTGCCAGAAAACTTAA‑CCCCGTTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTcg < 1:855816/141‑1 (MQ=255) ccAGCCCGTGAATACCGCTTGCGGTCGTGGCGCCCCCTCCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACg < 2:827288/151‑1 (MQ=255) ccAGCCCGTGAACCCCGCTTGCGGTGGGGGCCCCCACTCCCCCCCCCATATTG‑GACGACCCCTCCCTGGTCCCCCCCGGGCTTCCCAGGAAACTAAA‑CCCCGTTTTGGTCCTTTGGACTATC‑AGCCCCGCCTCTTCAATCGCTTcgcg < 1:752668/148‑1 (MQ=255) ccAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACg > 2:984497/1‑151 (MQ=255) aGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACggg > 2:897663/1‑151 (MQ=255) ccGTGAATCCCGCTTGCGCTCGGGGCGCCCCCTTCCCCCCCCAAAATG‑GCCAAACGCTCTCTGGTGCCCCCCGGCCTCGCCAGGAAACTTAA‑CCCCGTTTGGGTCGGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTcgc < 1:474215/142‑1 (MQ=255) ccGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCa > 1:262564/1‑150 (MQ=255) tGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACAt > 1:258181/1‑151 (MQ=255) cccGCTTGCGGTCGGGGCGCCCCCTCCCCCCCCCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGAAAACTTAA‑CCCCGTTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACAt < 1:617899/145‑1 (MQ=255) cggttggCGGCCGGGGCCTCCCCTCCCCCCCCAAAAATT‑GACGAACGCTCCCGGGGCCCCCCGGGGCTTCCAAGAAAACTTAC‑CCCCGGTTTGGCCCGTTTGAC‑ATCAAGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAAc < 2:1067239/137‑1 (MQ=255) cTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCacac > 1:6595/1‑151 (MQ=255) tggggggcggggCGCCCCCTCCGCCCCCCAAAATG‑GACGACCGCTCACTGGCGCCCCCCGGGCTTGCCAGAAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCcaca < 1:415013/139‑1 (MQ=255) gcggcgtggccgcccACTCCCCCCCCCATAATT‑GACAACCCCGCAGGGGTGCCCCCGGGGTTTGCCAGAAACCTTAA‑CCCCGTTTGGGTCGGTTTACCTTTC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCcaca < 1:548013/134‑1 (MQ=255) ggtgggggCGCCCCCTCCCCCCCCCAAAATG‑GACGACCGCTCCCGGGTGCCCCCCGGGTTTGCCAGAAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑ATTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCacac < 1:269983/140‑1 (MQ=255) ggtgggggCGCCCACTCCGCCC‑CCAAAATTCGACCACCGCTCCCTGGTCCCCCCCGGGCTTGACAGAAAACTTAA‑CTCCGGTTTGTTCTGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCa < 2:690496/145‑1 (MQ=255) ggTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTc > 1:136008/1‑150 (MQ=255) ggTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTc > 2:126183/1‑150 (MQ=255) ggTCGGGGCCCCCCCTTCCCCCACCATAATT‑GACGACCGCTCACTGTTCCCCCCCGGGCTTGCCAGAAAACTTAC‑CCCCTGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTc < 2:191908/150‑1 (MQ=255) gccGTGGCCTCCTCTTCCCCCCCCATAATT‑GACGAACGCTCGCTGGTGCCCCCGGGGCTTGCCAGGAATCTTAT‑CCCCGGTTTGTCCCGTTTGACTATA‑ACTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCa < 2:501606/148‑1 (MQ=255) gTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCAccc > 1:1202424/1‑150 (MQ=255) cgccccctcccccccccATAATT‑GACGAACGCTCCCTGGTCCCCCCCGGGCTTGCCAGAAAACTAAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCct < 2:862871/136‑1 (MQ=255) cGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTc > 2:656839/1‑151 (MQ=255) gTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTc > 1:834654/1‑150 (MQ=255) cccgctccccccACAATAATT‑GACGAACCCTCCCTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCaa < 1:662941/142‑1 (MQ=255) cccctcccccccccATAATT‑GACGAACCCTCCCGGGTCCCCCCCGGGCTTGCAAGGAAATTTAC‑CCCCGGTTTGGCCCTTTTGACTACC‑AGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTc < 1:1133640/140‑1 (MQ=255) cccctccccccACCATAATT‑GACGACCGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CCCCGTTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCtt < 2:1249249/139‑1 (MQ=255) cccctccGCCCCCCATATTG‑GCCGAACCCGCCGTGGTGCCCCCGGGGCTGGCCAGAAAACTTAA‑CCCCGGTTGGGTCCTTTTGCCTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCa < 1:164621/143‑1 (MQ=255) ccactcccccacccaTAATT‑GACAAACGCTTAGTGGTGCCCCCCGCACTGCGCAGCAAAATTAA‑CACCGGTTTGGCCCTTTTCCTTTCC‑CCTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACGCTTTCACCCTCtt < 1:604693/135‑1 (MQ=255) ccACTCCGCCCACAATAATA‑GCCGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGAAATTTAAA‑CACCGTTTTGGACCGTTCGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCctct < 2:1006386/146‑1 (MQ=255) cACTCCCCCCCCCAAAATT‑GCCGACCCCTCACGGTCCCCCCCCGGGTTTCCCAGGAATCTCAC‑CCCGGGTTTGGCCCGTTTGTTTATC‑AGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCAccc < 1:242775/142‑1 (MQ=255) tcccccccccAAAATG‑GACGACCCCTCCCGGGTGCCCCCCGGGTTTGCCAGAAAATTAAC‑CCCCGTTTTGGTCGTTTTAATTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAatca < 1:1043708/145‑1 (MQ=255) ccccccACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGTTTGCCAGAAAACTTAA‑CCCCGGTTTGGTCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATcc < 2:639969/148‑1 (MQ=255) ccccccccAAAATT‑GACAAACGCTCACTGGTCCCCCCCGGGCTTGCCAGAAAACTTAA‑CCCCGTTTGGGCCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAatcatc < 1:841679/147‑1 (MQ=255) cccccccATAATG‑GACGACCGCTCACGGGTCCCCCCCGGTCTTGCCAGAAAACTTAA‑CCCCGTTTTGGTCCGTTTGCCTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCg < 1:874021/150‑1 (MQ=255) ccccaTAATG‑GCGGAACGCTCACTGGTGCCCCCCGGTTTTGCCAGGAAACTAAC‑CCCCGGTTTGGCCCTTTTGTCTTTC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCa < 2:1200739/149‑1 (MQ=255) aTAATT‑GACGACCCCTCACTGTTCCCCCCCGGGCTTGCCAGGAAACTTAC‑CCCCGGTTTGGCCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAAcc < 2:1263185/150‑1 (MQ=255) t‑GACGGAAGCTCACCGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGGTTTGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCCTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTcc > 1:574975/1‑151 (MQ=255) gACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTcc > 1:630712/1‑150 (MQ=255) aCGAACGCTCCCTGGTGCCCCCCGGGCTTGCCAGGAAACTTAC‑CCCCGGTTGGGCCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCa < 2:875233/150‑1 (MQ=255) aaCGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTAAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAg < 2:361658/151‑1 (MQ=255) aCGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAC‑CCCCGTTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGt < 1:1181571/148‑1 (MQ=255) cGCTCCGTGGTCCCCCCCGGGCTTGCCAGGAAACTTAC‑CCCCGTTTGGGCCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGcc < 2:149033/151‑1 (MQ=255) gCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGcc > 1:1013452/1‑150 (MQ=255) cTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCa > 2:537336/1‑150 (MQ=255) cTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCa > 2:34086/1‑150 (MQ=255) cTCACTGGTCCCCCCCGGCCTTGCCAGAAAACTTAA‑CCCGGGTTGGGTCCTTTTGACTATC‑AGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAg < 1:207773/144‑1 (MQ=255) cccgggTCCCCCCCGGGCTTCCCA‑GAAACTTAACCCCCGTTTTGGCCCTTTTGACTATC‑AGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCaa < 1:1146196/145‑1 (MQ=255) cACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAgg > 1:121447/1‑151 (MQ=255) cACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAgg > 1:244603/1‑151 (MQ=255) ggTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAgggg < 2:1145598/149‑1 (MQ=255) ggTGCCCCCCGGGCTTGCCAGAAAACTTAA‑CACCGGTTTGGTCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAggg < 2:1212565/148‑1 (MQ=255) cccgtcttggcgaGGAAACTTAC‑CGCCGGTGTGTTCTGTTTGACTTTC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCTCCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTgg < 1:54717/139‑1 (MQ=255) ggCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTc > 2:224813/1‑151 (MQ=255) ttGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGt > 1:745018/1‑150 (MQ=255) ttGCCAGAAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGt < 2:1178831/150‑1 (MQ=255) tGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTa > 1:407989/1‑150 (MQ=255) ccAGGAACCTAAA‑CCCCGTTTTGGTCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTAcgc < 2:461410/151‑1 (MQ=255) ccAGGAAACTTAC‑CACCGTTTGGGTCCTTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTAcgc < 2:858117/151‑1 (MQ=255) ggAAACTTAA‑CCCCGGTTTGGTCCGTTTGACTATC‑AGCCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGt < 2:197613/144‑1 (MQ=255) ggAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGc > 1:29657/1‑151 (MQ=255) cTTAC‑CCCCGTTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATc < 2:499756/150‑1 (MQ=255) aa‑CCCCGTTTGGGCCCTTTTTACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATc < 1:359226/147‑1 (MQ=255) | GCCTGTTCCCGGCTTACCACATGAACGCGAATATCTTCGTTTTCATCAGCCAGACCGTGAATACCGCTTGCGGTCGTGGCGTCCACTTCGCCCACCATAATT‑GACGAACGCTCACTGGTGCCCCCCGGGCTTGCCAGGAAACTTAA‑CACCGGTTTGGTCCGTTTGACTATC‑AGTCCCGCCTCTTCAATCGCTTCGCGACGGGCAACATCTTCCACACTTTCACCCTCTTCAATCATCCCGGCAACCATCTCCAGTAGCCAAGGGGTTTCGCTGGTGTCGTACGCGGCAATC > NC_000913/3177384‑3177674 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |