Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,804,864	Δ13 bp	coding (50‑62/1203 nt)	proV →	glycine betaine/proline ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2804864	2804876	13	95 [0]	[0] 94	proV	glycine betaine/proline ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2804863	0 (0.000)	90 (1.100)	69/286	0.2	100%	coding (49/1203 nt)	proV	glycine betaine/proline ABC transporter periplasmic binding protein
	?	NC_000913	2804877 =	0 (0.000)					coding (63/1203 nt)	proV	glycine betaine/proline ABC transporter periplasmic binding protein

CAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTC  >  NC_000913/2804714‑2805008                                                                                                                                                      |                                                                                                                                                  cAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCg                                                                                                                                                  <  2:103451‑M1/151‑2 (MQ=255) cAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCg                                                                                                                                                  <  1:459978‑M1/151‑2 (MQ=255) cAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGC                                                                                                                                                   <  1:1161779‑M1/150‑1 (MQ=255)  aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgt                                                                                                                                                 >  1:701522‑M1/1‑149 (MQ=255)    gggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttc                                                                                                                                               <  1:510044‑M1/151‑5 (MQ=255)          ccTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatat                                                                                                                                         <  2:21208‑M1/151‑11 (MQ=255)             cAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatata                                                                                                                                        <  2:816422‑M1/149‑12 (MQ=255)                aTTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaa                                                                                                                                   <  1:135834‑M1/151‑17 (MQ=255)                     cAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaa                                                                                                                                <  1:243401‑M1/149‑20 (MQ=255)                      aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaagg                                                                                                                              >  1:1227214‑M1/1‑129 (MQ=255)                        tctgtTAGGGGAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggact                                                                                                                           >  2:793869‑M1/3‑127 (MQ=255)                        tATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggact                                                                                                                           >  2:601579‑M1/1‑127 (MQ=255)                         aTGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactt                                                                                                                          <  1:342959‑M1/151‑26 (MQ=255)                         aTGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactt                                                                                                                          <  2:853424‑M1/151‑26 (MQ=255)                          tGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggacttt                                                                                                                         >  2:823991‑M1/1‑125 (MQ=255)                          tGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggacttt                                                                                                                         >  1:82811‑M1/1‑125 (MQ=255)                             tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttca                                                                                                                       >  2:286407‑M1/1‑122 (MQ=255)                             tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttca                                                                                                                       >  1:413032‑M1/1‑122 (MQ=255)                                ggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaag                                                                                                                   <  2:256792‑M1/151‑33 (MQ=255)                                   aGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaa                                                                                                                 <  1:133046‑M1/150‑35 (MQ=255)                                    gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaaca                                                                                                               <  2:1092518‑M1/151‑37 (MQ=255)                                         aaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattc                                                                                                          <  2:1077909‑M1/151‑42 (MQ=255)                                          aGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattct                                                                                                         <  2:196688‑M1/151‑43 (MQ=255)                                            tGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctg                                                                                                        <  2:657438‑M1/150‑44 (MQ=255)                                              aCTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaa                                                                                                     <  1:697988‑M1/151‑47 (MQ=255)                                              aCTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaa                                                                                                     <  2:678657‑M1/151‑47 (MQ=255)                                                tATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaa                                                                                                    >  1:808765‑M1/1‑103 (MQ=255)                                                 aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaa                                                                                                   <  2:828066‑M1/150‑49 (MQ=255)                                                  tttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaa                                                                                                  >  1:887119‑M1/1‑101 (MQ=255)                                                     ccATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactg                                                                                              <  2:1045254‑M1/151‑54 (MQ=255)                                                      cATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatagaacaaggactttcaaaagaacaaattctggaaaaaac                                                                                                >  1:52927‑M1/1‑97 (MQ=255)                                                        ttGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggc                                                                                           >  1:1257181‑M1/1‑95 (MQ=255)                                                            gTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatc                                                                                       <  1:169792‑M1/151‑61 (MQ=255)                                                              aaTATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcg                                                                                      <  1:471108‑M1/150‑62 (MQ=255)                                                                tatatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgctt                                                                                   >  1:513361‑M1/1‑87 (MQ=255)                                                                      gACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcg                                                                               >  2:506332‑M1/1‑81 (MQ=255)                                                                       aCATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgta                                                                             >  2:1255141‑M1/1‑80 (MQ=255)                                                                        cATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaa                                                                           <  1:705069‑M1/151‑73 (MQ=255)                                                                         aTAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaa                                                                           >  2:951387‑M1/1‑78 (MQ=255)                                                                            gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                                                       <  2:257588‑M1/151‑77 (MQ=255)                                                                            gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                                                       <  1:806691‑M1/151‑77 (MQ=255)                                                                               aaaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgcc                                                                    >  2:30991‑M1/1‑72 (MQ=255)                                                                                aaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaacctgggctatcgcttggcgtaaaagacgcc                                                                    >  1:768716‑M1/1‑71 (MQ=255)                                                                                aaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgcca                                                                   <  1:625826‑M1/151‑81 (MQ=255)                                                                                aaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgcc                                                                    >  1:678718‑M1/1‑71 (MQ=255)                                                                                 aTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgcc                                                                    >  1:1073594‑M1/1‑70 (MQ=255)                                                                                   aaaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagt                                                                 <  1:322659‑M1/150‑83 (MQ=255)                                                                                    aaGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtct                                                               >  2:885934‑M1/1‑67 (MQ=255)                                                                                        aaTCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGAGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctg                                                              >  2:591881‑M1/1‑63 (MQ=255)                                                                                          tCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccat                                                         >  2:1040129‑M1/1‑61 (MQ=255)                                                                                             ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccatt                                                        <  1:1048313‑M1/149‑92 (MQ=255)                                                                                             ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccatt                                                        <  2:442421‑M1/149‑92 (MQ=255)                                                                                             ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccatt                                                        <  2:347018‑M1/149‑92 (MQ=255)                                                                                             ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggcca                                                          <  2:234809‑M1/147‑90 (MQ=255)                                                                                                 aTTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaa                                                  <  1:783221‑M1/151‑98 (MQ=255)                                                                                                 aTTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaa                                                     <  2:633389‑M1/148‑95 (MQ=255)                                                                                                    gCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggc                                               >  2:1321043‑M1/1‑51 (MQ=255)                                                                                                       tGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg                                              >  2:1056772‑M1/1‑48 (MQ=255)                                                                                                       tGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg                                              >  2:920294‑M1/1‑48 (MQ=255)                                                                                                         gCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg                                              >  1:896264‑M1/1‑46 (MQ=255)                                                                                                              taaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatattt                                      <  2:1017191‑M1/150‑110 (MQ=255)                                                                                                              taaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatattt                                      <  1:981820‑M1/150‑110 (MQ=255)                                                                                                               aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt                                    >  1:809096‑M1/1‑40 (MQ=255)                                                                                                               aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt                                    >  2:597109‑M1/1‑40 (MQ=255)                                                                                                                 attaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtc                                   >  2:82713‑M1/1‑38 (MQ=255)                                                                                                                  ttaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcat                                 >  2:934766‑M1/1‑37 (MQ=255)                                                                                                                   taGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatc                                >  1:966776‑M1/1‑36 (MQ=255)                                                                                                                   taGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatc                                >  1:220608‑M1/1‑36 (MQ=255)                                                                                                                   taGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgccatc                                >  2:469077‑M1/1‑36 (MQ=255)                                                                                                                      aaaTTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatg                             >  2:457742‑M1/1‑33 (MQ=255)                                                                                                                             aaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattat                      >  2:88325‑M1/1‑26 (MQ=255)                                                                                                                             aaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattat                      >  1:828340‑M1/1‑26 (MQ=255)                                                                                                                             aaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattat                      <  1:672659‑M1/151‑126 (MQ=255)                                                                                                                             aaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattat                      >  1:271180‑M1/1‑26 (MQ=255)                                                                                                                              aaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatc                     >  1:1109790‑M1/1‑25 (MQ=255)                                                                                                                                 cTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccgg                  >  2:655857‑M1/1‑22 (MQ=255)                                                                                                                                   ttATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggct                >  2:241870‑M1/1‑20 (MQ=255)                                                                                                                                   ttATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccg                   <  2:545912‑M1/148‑129 (MQ=255)                                                                                                                                   ttATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccg                   <  2:1269312‑M1/148‑129 (MQ=255)                                                                                                                                   ttATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccg                   <  2:201982‑M1/148‑129 (MQ=255)                                                                                                                                       aaaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcggg            >  1:381357‑M1/1‑16 (MQ=255)                                                                                                                                       aaaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcggg            >  1:1122760‑M1/1‑16 (MQ=255)                                                                                                                                       aaaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcggg            >  2:65821‑M1/1‑16 (MQ=255)                                                                                                                                        aaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggt           <  2:986794‑M1/151‑137 (MQ=255)                                                                                                                                        aaaTATTTGACGAGCgttcaaatatatcgaacaaggaccttcaaaagaacaaattctggaaaaaactgggcgatcgcttggcgtaaaagacgccagtctggccaatgaagaaggtgagatatttgtcatcatgggattatccggctcg              <  2:610598‑M1/148‑134 (MQ=255)                                                                                                                                         aaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggt           >  1:156199‑M1/1‑14 (MQ=255)                                                                                                                                          atatTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaa         <  2:701498‑M1/151‑139 (MQ=255)                                                                                                                                           tatTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggta          >  1:843430‑M1/1‑12 (MQ=255)                                                                                                                                              ttGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatcc     >  1:879326‑M1/1‑9 (MQ=255)                                                                                                                                              ttGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatc      <  2:660386‑M1/150‑142 (MQ=255)                                                                                                                                                ggCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatcca    <  2:122888‑M1/150‑144 (MQ=255)                                                                                                                                                 gCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatccac   >  2:1206984‑M1/1‑6 (MQ=255)                                                                                                                                                 gCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatc      <  1:466193‑M1/147‑142 (MQ=255)                                                                                                                                                  cGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatccaca  >  1:354766‑M1/1‑5 (MQ=255)                                                                                                                                                  cGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatccaca  >  2:361599‑M1/1‑5 (MQ=255)                                                                                                                                                      |                                                                                                                                                  CAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTC  >  NC_000913/2804714‑2805008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑