| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,415,395 | 0 | G | A | 41.7% | 99.7 / 45.7 | 85 | R664R (CGC→CGT) | recE | Rac prophage; exonuclease VIII, 5' to 3' specific dsDNA exonuclease |
| Reads supporting (aligned to +/- strand): ref base G (14/35); new base A (35/0); total (50/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.48e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GCCATAACGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTG > NC_000913/1415246‑1415545 | gCCATAACGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGc < 2:251790/151‑1 (MQ=255) aaCGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGtt < 1:56477/150‑1 (MQ=255) aaCGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTa < 1:384827/151‑1 (MQ=255) aaCGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTa < 1:1109789/151‑1 (MQ=255) tttGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAGGTGCTACCATAAAAC‑GGGTACt > 2:1030800/1‑148 (MQ=255) ttGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTATGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGaa < 1:231055/150‑1 (MQ=255) tGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCATGTGCTACGATAAAAC‑GGTTTATGaa > 2:719593/1‑149 (MQ=255) gATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAAtt < 2:84278/150‑1 (MQ=255) aTGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCCCGTGCTTCGGTAAACC‑GGGTATTGAAttctt > 2:747312/1‑148 (MQ=255) aTGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCg < 1:777112/151‑1 (MQ=255) aTGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCg < 1:596647/151‑1 (MQ=255) gTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGGTACTGAATTCTTTCGGtt > 2:270016/1‑150 (MQ=255) tCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCa < 2:403277/150‑1 (MQ=255) tCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGATAAATTCCTAGGGTAGCCTAAAAC‑AGTTACAGAATTCTTTCggct > 1:730868/1‑146 (MQ=255) aaTTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGt < 2:850178/151‑1 (MQ=255) aaTTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGTTACTGAATTCTTCCGGtt > 1:801130/1‑146 (MQ=255) aTTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCGGGCGTTTGTACGGC‑GGTTAAATTCAGGTTGTCCGTTAAAGA‑GGGTACTGAATTTTTCCGGTTCaaa > 1:1306916/1‑148 (MQ=255) ttttCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGTGCTACGATAAAAC‑GGGTACTGAATTCTTCCGGTTCAAGTa > 1:1233559/1‑150 (MQ=255) ttCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAAGGGGTACGATAAAAC‑GGTTACTGAATTTTTTCGGTTCAAGTAccc > 1:1169355/1‑151 (MQ=255) cGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGc < 1:447607/151‑1 (MQ=255) cGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTGCCGGTTCAAGTACCCgg < 2:1167990/150‑1 (MQ=255) gCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGGTACTGAATTCTTTCGGGTCAAGTACCCgg > 1:1087382/1‑148 (MQ=255) ccTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGGGCTTCGGAAAAAC‑GGCTACTGAATTCTTCCCGCTCAAGGAACCCGCAg > 1:691560/1‑150 (MQ=255) cttcttCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAAATCAGGTGCTACGATAAAAC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCCGTg > 1:683094/1‑151 (MQ=255) tcttcCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTgg < 1:808060/150‑1 (MQ=255) cttcCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGTGCTTCGTTAAAAC‑GGTTTCTGAATTTTTTCGGTTCAAGTACCCGGccgggg > 2:358183/1‑144 (MQ=255) tcCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGTGCTTCGATAAAGG‑GGTTACTTAATTTTTCCGGTTTAAGTACCCCGccggggga > 2:1086441/1‑142 (MQ=255) tcCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGGGCCACGATAAAGC‑GGTTACTGTATTTTTCCGGGTCAAATAcaccgccgcgggaa > 2:230156/1‑137 (MQ=255) gCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGGGGTACGATAAAAC‑GGGTACTGAATTTTTCCGGGTCAAGTACCCCGCAGTGGgaa > 1:545110/1‑147 (MQ=255) gATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTcc < 2:1013423/150‑1 (MQ=255) aaCCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAAATCAGGTGCTACGATAAAAA‑GGGTTCTGTATTTTTCCGGTTCCAGTACCCGGCAGAGGAAAGCAGTTTCtta > 1:764523/1‑148 (MQ=255) aCCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTTAGGTGCTACGATAAAAC‑GGGTACTGAATTCTTCCCGGTCAAGGACCCGGCAGTGGGAAGCAGGTCCTaaa > 1:684727/1‑150 (MQ=255) gTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAAATTAGGGGCTACCAAAAAAC‑GGTTACCGAATTCTTTCGGTTCAAATACCCCGCAGTGGAAAGGAGGTCCTAAATCg > 1:1070526/1‑150 (MQ=255) tttttCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGGTACTGAATTCTTCCGGTTCAAGTACCCCGCAGCGGAAAGCAGTTTCTaaa > 1:924964/1‑146 (MQ=255) ccTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGttt < 2:1086197/151‑1 (MQ=255) gtgCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGttttt < 1:1115891/150‑1 (MQ=255) gtgCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGtttt < 1:861071/149‑1 (MQ=255) gtgCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGtttt < 1:1119839/149‑1 (MQ=255) tgCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTTACGTGCTAAGATTAAGG‑GGGTTCTGAATTTTTTCGGTTCAAGAAGCCGGCCGGGGGAAACAGTTCCTAAATCGCGGGttttt > 1:1334179/1‑149 (MQ=255) tGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGGGCTACGATAAAGC‑GGGTAATGAATTCTTCCGGTTCCAGTAACCGGCAGTGGAAAGCAGGTCCTAAATCGAGCGGTTTTGTCttt > 1:662688/1‑151 (MQ=255) tGCGCATTCCATCAGAAACGCTGTCACTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAGTTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGACCGTTTTTTTCtt < 2:433478/150‑1 (MQ=255) cgcATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGTGCTACGATAAAAA‑GGGTACTGAATTCTTTCGGGTCAAGTAACCGGCAGAGGAAAGCAGGTTCTAAATAGAGCGCTTTTTTCttttt > 2:1205873/1‑149 (MQ=255) cgcATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGGTAAATTGAAGGGCCGCGATAAAAA‑GGCTCTTGAACTCTTACGGTTCAAGGAACCGGCCGGGGAAAGGAATTTCTAAATCGGGCGGTTTTGTCTTtg > 1:310934/1‑150 (MQ=255) gcATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAGGTGCTTCGATAAAACGGGTTATTAAATTTTTCGGGTT‑AAGTAACCGGGCGTGGAAAACAATTCTCAAAATGTGCGTTTTTGTCtt > 1:1015017/1‑147 (MQ=255) gcATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTTAGGGCTACCATAAAAC‑GGGTACTGAATTCTTCCGGTTCCAATAACCCGCAGTGGGAAGCAGTTTCTAAATAGAGCGTtttttttttt > 2:968151/1‑148 (MQ=255) aTTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAGGGGGTAAGATAAAAC‑GGTTACTGAATTTTTTCGGGTCAAGTAACCCGCAGTGGAAAGCCGTTCCCAAATTGAGCGGTTTTTTCTTTttgg > 1:260524/1‑150 (MQ=255) aTTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGGGCTTCCATAAAAC‑CGGTACTTAATTCTTTCCGGTCAAGTAACCCGCAGTGGGAAAGAGTTTCTAAATCGAGCGTTTTTGTCTTTttgg > 2:792716/1‑150 (MQ=255) aGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGCGGGTAAAATTCA‑GTGCCAAGGTAAAAG‑GGGTTCTGAATTTTTCCGGTTTAAGGAACCGGGCGAGGAAAGCAGATTCTAAATCGAGCGTTTTTGTCTTTGTGGTGTTCAc > 2:1262737/1‑149 (MQ=255) aGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCTGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACgg < 1:115778/151‑1 (MQ=255) gAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑AGGTAATGAATTTTTTCGGGTCAAGGACCCCGCAGTGGAAAACAGTTCCTTAATTGAGCGTTTTTTTCTTTGTGGTGTTCAAggg > 1:1241356/1‑151 (MQ=255) aaCGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCACGCGCTACCATAAAAC‑GGGTACTGCATTCTTCCGGTTCAAGTACCCGGCAGGGGGAAGCAGTTCCTCAATTCAGCGTTTTTTTCTTTGTGGTGTCCACggggg > 2:125486/1‑151 (MQ=255) cGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAGGTGCTTCGATAAAAG‑GGTTACTGAATTCTTCCGGTTTTAGAACCCCGCCGGGGAAAGCAGGTCCTAAAAAGCGCGCTTTTTTTTTTGTGGTGTTCCCcgggg > 1:348139/1‑149 (MQ=255) gCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTTAATTCAGGTGCTACGATAAAAC‑GGTTACTGAAATCTTTCGGGTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTTTGGTGTCCCCGGGGGCAt > 1:1150389/1‑151 (MQ=255) gCTCTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCTGGTGCTTCGATAAAAC‑GGGTTCTTAATTCTTCCGGGTTAAGTACCCGGCAGTGGAAAGCAGTTTCTTAATCGAGCGTTTTTTTCTTTGTTGTGTCCACGGGGGCAt > 2:170140/1‑151 (MQ=255) cTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGTGTCTCGATAAAAC‑GGGTACTGAAATTTTTCGGGTCTAGTACCCCGCAGTGGGAAGGAGTTTCTAAAATGAGCGTTTTTTTCTTTTTGGGGTCCACGGGGGCAtt > 2:628093/1‑151 (MQ=255) cttcttcttTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCAttttt < 2:1018201/148‑1 (MQ=255) ttcttcttTTCCGGCGTTTGTACGGC‑GGTTTACTTCAAGAGCTACGATTAAGC‑GGTTTCTGCCATTTTCCGGCTTTATTATCCGGGAGCGGGAAACAACTCCTCAATAGAGGGGTTTTGTTTTTGTGGGGTCCACAGGGGGGTTTTTActc > 1:1228905/1‑149 (MQ=255) ttcttcttTTCCGGCGTTTGTACGGC‑GGTTAAATTTAAGTGCTACGATAAAAC‑GGTTAATGAAATCTTCCGGGTCAAGGACCCGGCAGTGGAAAGCAGTTCCTAAATCGCGCGGTTTTGTGTTTGTGGGGTCCACGGGGGGATTTTTTCGc > 1:1083730/1‑151 (MQ=255) cttcttTTCCGGCGTTTGTACGGC‑GGTTAAATTTAGGGGCTACGATAAAAC‑GGGTTCTGAATTTTTCCGGGTCAAGTACCCGGCAGTGGGAAACAGTTCCTAAATCGAGCGGTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGcc > 1:932951/1‑150 (MQ=255) cttTTCCGGCGTTTGTACGGC‑GGTTAAATTCCGGTGCTTCGATAAAAG‑GGTTAATGAATTCTTCCGGTTTAAGGAACCGGCAGTGGGAAGCCGTTCCTAAATTGTGCGTTTTTGTCTTTTTGGTGTTCACGGGGGGATTTTTACGCcaca > 1:943143/1‑150 (MQ=255) cttTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGGGCTACGATAAAAC‑GGGTACTGAATTCTTCCGGGTCAAGGACCCCGCAGTGGGAAGCAGTTCCTAAATCGAGCGGTTTTTTCTTTGTGGGGTCCACGGGGGGATTTTTACGCcac > 1:499234/1‑149 (MQ=255) tttCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCcaca < 1:39859/148‑1 (MQ=255) tttCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACaaa < 1:993530/150‑1 (MQ=255) tttCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGGTTCTTAATTCTTTCGGGTCAAGGACCCGGCAGTGGAAAGAAGTTTCCAAATCGAGCGGTTTTTTCTTTTTGGGGTCCACGGGGGCCTTTTTTCGCCCCaa > 2:209603/1‑149 (MQ=255) ttCCGGCGTTTGTACGGC‑GGTTAAATTCATGGGTTACTGTAAAGC‑GGGTATTTAAATCTTCCGGGTCAAGGACCCGGCAGTGGAAAGCAGTTTCTTAAAACAGCGGTTTTGTTTTTTTGGGGTTTCCGGGGGGATTTTTACGCCACaaaa > 2:1032813/1‑149 (MQ=255) ttCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTTTCTTTGTGGTGTCCACGGGGGCCTTTTTACGCCACaaa > 1:944286/1‑149 (MQ=255) gTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAAC‑GGGTTCTGAATTCTTTCGGGTTAAATACCCGGGAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTTTCTTTTTGGTGTCCACGGGGGCATTTTTACGCCCCAAATATAGt > 2:25712/1‑148 (MQ=255) aCGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTa < 2:1210480/151‑1 (MQ=255) c‑ggTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATc > 1:1281330/1‑149 (MQ=255) ggTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGc > 1:414220/1‑151 (MQ=255) gTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCa < 1:494006/151‑1 (MQ=255) tAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAAt > 2:1271414/1‑151 (MQ=255) aaaTTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGTGCATTTTTACGCCACAAATATAGTGCCGGAGTATCATCAAt < 2:772048/150‑1 (MQ=255) aTTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTc < 2:1180407/151‑1 (MQ=255) cAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATc < 1:1086500/151‑1 (MQ=255) cAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATc < 1:317348/151‑1 (MQ=255) cAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATc < 1:50149/151‑1 (MQ=255) gttcTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGATTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACACCACAAATATAGAGCCGGAGTATCAGAATTGTCATCGa > 2:1232438/4‑150 (MQ=255) cTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTg > 1:603554/1‑151 (MQ=255) aCGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTg < 1:813303/149‑1 (MQ=255) aTAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACt > 2:602928/1‑151 (MQ=255) aaaGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACtt < 1:924024/150‑1 (MQ=255) aaaGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACtt < 1:1030854/150‑1 (MQ=255) aaaGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTa < 1:1200459/151‑1 (MQ=255) aaaGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTa < 1:353090/151‑1 (MQ=255) gC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTg > 1:412260/1‑151 (MQ=255) gC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTg > 2:882882/1‑151 (MQ=255) | GCCATAACGCTTTGATACATGAGTTCAATTTTCCGGCCTTCTTCCGCAGTGATAACCGTTTTTCCTGTGCTTGCGCATTCCATCAGAAACGCTTTCTCTTCTTCTTTTCCGGCGTTTGTACGGC‑GGTTAAATTCAGGTGCTACGATAAAGC‑GGTTACTGAATTCTTCCGGTTCAAGTACCCGGCAGTGGAAAGCAGTTCCTAAATCGAGCGTTTTTGTCTTTGTGGTGTCCACGGGGGCATTTTTACGCCACAAATATAGTGCCGGAGTATCAGCAATGTCATCGAGCTGAGACTTACTG > NC_000913/1415246‑1415545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |