| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,483,268 | 0 | T | A | 40.0% | 94.4 / 36.7 | 71 | L24F (TTA→TTT) | emrK | multidrug resistance efflux pump membrane fusion protein |
| Reads supporting (aligned to +/- strand): ref base T (28/14); new base A (0/28); total (28/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.97e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTG > NC_000913/2483118‑2483416 | gTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑aataaat < 1:459399/151‑1 (MQ=255) ttCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑aataaat > 2:705919/1‑150 (MQ=255) tCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAAATCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑aataaat < 2:950998/149‑1 (MQ=255) cGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AAtaaataaa < 2:1218003/151‑1 (MQ=255) tATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAAc > 1:406025/1‑151 (MQ=255) tCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACt > 2:1133180/1‑150 (MQ=255) ttATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCg > 2:1128755/1‑151 (MQ=255) tATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGc > 2:94294/1‑151 (MQ=255) aTGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGcc > 1:1265647/1‑151 (MQ=255) aTGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGcc < 2:1310554/151‑1 (MQ=255) aTGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGc < 2:552754/150‑1 (MQ=255) gATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCa > 2:464613/1‑150 (MQ=255) aaCGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATaa > 1:1174971/1‑150 (MQ=255) cGACAGTGCCACTCCCGGATATTTGTGCAAAAATTGTATCTGCATTCCCCGTGACATAGGCTTCATCTGTACTAATCATTTCTTCAAATTCCATTGACC‑AATAGAC‑AAAGGCC‑CTTGAAAC‑CGC‑AAAAAATAAAACTACCGCCAATAAAGa < 2:159269/151‑1 (MQ=255) aCAGTGCCACTACCTGAGATTTGTGCAAAAATTGGATCGAAATTCCCGGAGACATAGGCGTCATTTGTACAAATCATGTCTTTTAATACCATTGACC‑AATGGGA‑AAAGGCC‑CCGAAAAG‑CGC‑AATAAATAAAACTACCGCCAATAAAGaaa < 1:1110859/151‑1 (MQ=255) aCAGTGACACTCCCGGAGACTTGTGCAAAAATTGGATCTGCATTCCCCGTAACAGAGGCGTCATTTGTACTAATCATGTCTTCAAATTCCATGGACA‑AAGAGGA‑ATAGGCC‑CGGAAAAA‑CGC‑AAAAAAAAAAACTACCGCCAATAAAGaa < 1:915088/150‑1 (MQ=255) cAGTGCCCCTCCCTGAGATTTGTGAAAAAATTGAATCTGCTTCCCCCGGGACATAGGCGTCATCTTTACTAATAATGTTTTCTAATCCCATGGCCA‑AAAAGGA‑AAAGGCC‑CCTGAAAA‑CGA‑AAAAAATAAAACTACCGCCAATAAAg < 2:799727/147‑1 (MQ=255) cAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGaaa > 2:88706/1‑150 (MQ=255) aGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGaaa > 1:40024/1‑149 (MQ=255) tGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGt > 2:1096725/1‑150 (MQ=255) cTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTttc > 1:1098370/1‑151 (MQ=255) cccggagaTTTGTGCAGAAATTGGTTCTGCTTCCCCGGTGACATGGCGGTCATCTTTACTAACCATGTCTTATAATCCCATTAACC‑AATGGGT‑AGAGCCA‑CCTAAAAA‑CGA‑AATAAAAAAACCTCCCGCCAATAAAGAAAAGTATTttctt < 2:132532/147‑1 (MQ=255) aCCTGAGACTTGTGCAGAAATTGGATCTGCATGCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCACTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACTGCCAATAAAGAAAAGTATTttctt < 1:876070/151‑1 (MQ=255) ccTGAGACTTGTGAAGAAATTGGTTCTGCTTTCCCCTTTACAAAGGCGTCATCTGTAATAATCATGTCTTAAAATTCCATTGACC‑AATAGGA‑AAAGGCA‑CCTAAAAC‑CGA‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTttctt < 2:679259/150‑1 (MQ=255) tGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg > 1:189415/1‑151 (MQ=255) tGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTAACATAGGCGTCATTTTTAATAATCATTTCTTCTAATTCCATTGACA‑AATAGGA‑ATGGGCA‑CCTAAAAA‑CGA‑AATAAAAAAACCTACCGCCAATAAAGAAAAGTATTttctt < 1:702955/148‑1 (MQ=255) gagcCTTGCGCAGAAATTGTATCTGCATCCCCCGTGACAGAGGCGTCTTCTGTACTACTCATTTCTTCTAATCCCATGGACC‑AATAGGC‑ATAGCCC‑CCTAAAAA‑CGC‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTg < 1:99084/150‑1 (MQ=255) gagaCTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGt > 2:633646/1‑151 (MQ=255) ttGTGAAAAAATTGGATCTGCATTCCCCGTAACATAGGCGCCATCTGTACTAATCATTTCTTATAATTCCATTAACC‑AATAGGC‑ATAGGCA‑CCTAAAAC‑CGA‑AAAAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGtt < 2:756656/147‑1 (MQ=255) gCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCTTCTGTACTAATCATTTCTTCTAATTCCATTGACC‑AATAGGA‑ATAGCCA‑CCTAAAAA‑CGC‑AAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATg < 1:505587/149‑1 (MQ=255) aaaaaTTGTATGTACTTTCCCCGGGACATAGGTTTCTCTTGTCTTAATCTTGTCTTAAAATCCCATTACCC‑AAAAGCA‑ATA‑GCC‑CCTAAAAA‑CCCAAAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATg < 1:486800/145‑1 (MQ=255) aaaaaTTGTACTTGCATTCCCCGTGACATAGGCGTCATTTGTACTAATCATGTTTTCTAATTCCATTGCCC‑AATAGAC‑AAAGGCA‑CTTAAAAA‑CCA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtt < 2:1100200/147‑1 (MQ=255) aGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttt > 1:186844/1‑151 (MQ=255) aGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttt > 2:575554/1‑151 (MQ=255) aaaTGGGATCCGCATTCCCGGGCACAAGGGCGTCATTTGATCAAATCATGTCTTCTAATCCACTTCCCC‑AATTCAA‑ATGGCAA‑AATAAAAA‑CCA‑AATAAAAAAAACCACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGtttt < 2:738633/149‑1 (MQ=255) aaTTGGATCTGCATTCCCCGTGACATAGGCGTCATTTGTACTAATAATTTCTTAAAATTCCATTGCCA‑AATAGGA‑AAAGCCA‑CCTAAAAA‑CAA‑AAAAAATAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTa < 2:418392/151‑1 (MQ=255) aaTTGGATCTGCATCCCCCGTAACAAAGGCGTCATTTGTACAAATAATGTCTTCAAATCCAATTAACC‑AATAGGA‑AAAGGCA‑CCTAAAAC‑CGA‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTa < 2:1310442/151‑1 (MQ=255) aTCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGa > 2:1315908/1‑150 (MQ=255) tCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAAt > 1:1317081/1‑151 (MQ=255) atcccccGTAAAATAGGCGTAATTTTTACTAATCATGTCTAAAAATTCCATTAACA‑AAAGGGC‑ATAGGCC‑CTTAAAAA‑CCA‑AAAAAAAAATTCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTg < 2:988501/140‑1 (MQ=255) tcccccGTGACATGGGCGTCATCTTTACTAATCATGTCTTCTAATTCCATTGCCA‑AATAGGC‑AAAGGCA‑CCGAAAAA‑CGA‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTaa < 1:1164723/146‑1 (MQ=255) ccccGTGACAAAGGCGTCATCTATACTAATCATGTCTTCTAATTCCATTGCCA‑AATAGGC‑AAAGGCA‑CCAAAAAA‑CAA‑AATAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGt < 1:1112334/151‑1 (MQ=255) cccGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGtt > 2:987588/1‑151 (MQ=255) gACATAGGCGTCATCTGCACTATTCATGTTTTCTATTCCCATTGCCC‑AATAGGC‑ATAGGCC‑CCGGAAAA‑CAA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCAc < 1:127362/150‑1 (MQ=255) aCATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt > 2:1068429/1‑150 (MQ=255) aCATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACt > 1:1210090/1‑150 (MQ=255) ggCTTCATCTGTACTAATCATGTTTTTTAATTCCATTGAAA‑AAGAGAT‑AGAGGCA‑CTTGAAAA‑CGT‑AAAAAAAAAAATTTCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtc < 2:1245602/151‑1 (MQ=255) ggCATCATCTGTACTAATCTTGTCTTCAAATTCAATTAACA‑AATAGGC‑AAAGGCA‑CCTGAAAG‑CGA‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACtattat < 2:312765/150‑1 (MQ=255) gCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtct > 1:202114/1‑151 (MQ=255) gtgatcttaacaaaTCATTTCTTCTAA‑CCCATTAAAC‑CAAAGGCAATAGGCA‑CCTAAAAC‑CCA‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctc < 1:859974/138‑1 (MQ=255) cATCTGTACTAATCATTTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTAAAAA‑CGA‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctctc < 2:481369/150‑1 (MQ=255) cATCTGAACTAATCATGTCTTATATCCCCATGCACC‑AA‑AGGC‑AAAAGTC‑CCCGAAAACCGA‑AAAAAAAAAATTTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTAtctct < 2:129068/149‑1 (MQ=255) caaattattctttatAATTCCATTACCC‑AACAGGC‑ATAGACA‑CCTAAAAG‑CTA‑AATAAATAAAATTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAt < 2:40024/130‑1 (MQ=255) aaTCATGTTTTCTAATCCCATTGACA‑AATAGGC‑ATGGGCC‑CCAAAAAC‑CAA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCAttt < 1:201257/144‑1 (MQ=255) atcatcTCTTACAATCCCA‑TGACCGAATGGGC‑A‑AGGCACCCTAAAAA‑CGC‑AAAAAAAAAACCTGCCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCAt < 1:143702/148‑1 (MQ=255) aTGTCTTCTAATTCCATTGACC‑AATAGGC‑AAAGCCA‑CCTAAAAA‑CGA‑AAAAAATAAATTTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATg < 2:442668/150‑1 (MQ=255) aTGTCTTAAAATCCCATGGAAC‑AAAAGAC‑ATAGGCA‑CCTAAAAA‑CTA‑AAAAAAAAAATCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGAt < 2:622011/149‑1 (MQ=255) ttctAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTAAAAA‑CGA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAtt < 1:562156/150‑1 (MQ=255) tctAATTCCATTGACA‑AATAGGC‑ATAGGCC‑CCTAAAAA‑CGA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAAt < 1:252896/148‑1 (MQ=255) ctAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAt > 2:430551/1‑151 (MQ=255) aTTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtga > 1:970101/1‑150 (MQ=255) cATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg > 2:451471/1‑150 (MQ=255) aTTGACC‑AATAGGC‑ATAGGCC‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaa < 1:306161/146‑1 (MQ=255) ttGACA‑AATAGGC‑AGAGGCA‑CCTAAAAA‑CGA‑AAAAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTAtgaat < 1:243022/146‑1 (MQ=255) caaatggaaataggca‑CTTAAAAA‑CCC‑AATAAAGAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCGCTATTATCTCTCATTTCTCATAGATGAAATTTAtgaattg < 1:996265/135‑1 (MQ=255) aaTAGGC‑ATAGGCA‑CCTAAAAA‑CGC‑AAAAAAAAAACCTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAag < 1:981751/151‑1 (MQ=255) gc‑ataggca‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcat > 2:1231917/1‑151 (MQ=255) ataggca‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattc > 1:363772/1‑151 (MQ=255) atagcccccaaaaaa‑CAA‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcatt < 1:893793/139‑1 (MQ=255) aggca‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGcattcat > 1:670833/1‑151 (MQ=255) ccaaaaac‑CGC‑AATAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc < 1:705943/147‑1 (MQ=255) ccaaaaac‑CGC‑AAAAAAAAAACTTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttctt < 2:1065597/146‑1 (MQ=255) ccaaaaaa‑CGC‑AAAAAAAAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCAttcttc < 1:464628/147‑1 (MQ=255) aaaa‑CGA‑AATAAAAAAAACAACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCatat < 1:983253/151‑1 (MQ=255) a‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCa > 1:1020926/1‑150 (MQ=255) ataaataaAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAacac > 2:180855/1‑150 (MQ=255) ataaaaaaAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAAcaca < 1:902097/151‑1 (MQ=255) aataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTg > 2:512398/1‑151 (MQ=255) aataaaACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTg < 2:186838/151‑1 (MQ=255) | GTTCGTATCTTTATGATTAACGACAGTGACACTACCTGAGACTTGTGCAGAAATTGGATCTGCATTCCCCGTGACATAGGCGTCATCTGTACTAATCATGTCTTCTAATTCCATTGACC‑AATAGGC‑ATAGGCA‑CCTGAAAA‑CGC‑AATAAATAAAACTACCGCCAATAAAGAAAAGTATTTTCTTCTGTTAGAATGTTTTTTATTTGAATTAATCTGTTCCACTATTATCTCTCATTTCTCATAGATGAAATTTATGAATTGAATGAAAAGAGCATTCATTCTTCATATCAAACACAGTG > NC_000913/2483118‑2483416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |