| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,287,719 | 0 | T | A | 40.3% | 89.9 / 46.3 | 67 | intergenic (‑348/‑45) | acs/nrfA | acetyl‑CoA synthetase/nitrite reductase, formate‑dependent, cytochrome |
| Reads supporting (aligned to +/- strand): ref base T (32/8); new base A (0/27); total (32/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.78e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTG > NC_000913/4287569‑4287869 | aaaaaGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAAt < 1:1265472/151‑1 (MQ=255) agagGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATaaaa < 2:1279949/151‑1 (MQ=255) agagGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATaaaa < 1:229334/151‑1 (MQ=255) gAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCg < 2:540914/151‑1 (MQ=255) aTACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGc < 2:333978/148‑1 (MQ=255) aTACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCa < 1:981711/150‑1 (MQ=255) aCTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATATGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTg > 2:429508/1‑151 (MQ=255) tGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGc > 1:36648/1‑150 (MQ=255) cTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGcaac > 1:547271/1‑150 (MQ=255) aaCTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAAt > 1:559529/1‑151 (MQ=255) tAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGgcgc > 2:492652/1‑151 (MQ=255) aacgTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGgcgc > 2:124261/4‑150 (MQ=255) aaaGTGGTATTTTACATGCATTTACAATTAATAAAAGACAAAATTCACAGTGTGGTTTTTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGTTT‑A‑C‑TGTCGTGAAAAAAAATAAAAA‑CCGCCATTGCAACAATGgc < 1:1028223/148‑1 (MQ=255) aaaGTGGTATTTTACATGCACTTACAATTGATAAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGAGAGCAATGTCATGACAGTGTAGGTGCGGTT‑T‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGgcg < 1:217215/149‑1 (MQ=255) tGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTc > 1:342448/1‑151 (MQ=255) tATTTTACATGCACTTACAATTGATAAAAGACAACATTCACAGTGTGTTTTTTTTTTACACATAGGGGCGAGAAATGTAATGACAGTGTGGGTGGGTTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCg < 2:1099240/149‑1 (MQ=255) ttttACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATg > 1:46824/1‑151 (MQ=255) tttACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATg > 1:341781/1‑150 (MQ=255) tttACATGCACTTACAATTGATAAAAGACAACATTCACAGTGTGGTTTTTTTTTACACATGGGGGCGAGCAATGTCATGACAGTGTAGGGGCGGTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATg < 2:874901/150‑1 (MQ=255) aCATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGc > 1:610269/1‑151 (MQ=255) aCATGCACTAAAAATTGATAAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTAAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGaa < 1:1332499/149‑1 (MQ=255) tGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGcccc > 1:324448/1‑151 (MQ=255) cTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATg > 1:898722/1‑151 (MQ=255) ttACAATTGATAAAAGACAACATTCACAGTGTGTTTATTTGTTACACATGGGGGCGAGAAATGTCATGACGGTGTGGGTGCGTTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTAt < 2:6377/149‑1 (MQ=255) cAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACa > 2:1263834/1‑150 (MQ=255) tGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGACGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGAt > 2:480750/1‑151 (MQ=255) gATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGAt > 2:1092374/1‑150 (MQ=255) ataaaaGACAACATCCCCAGTGTGTTTATTTGTTACACATAGGGGGGAACAATGTCATGACAGTGTAGGTGCGTTT‑C‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATa < 2:889488/147‑1 (MQ=255) ttAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATaa > 2:1141334/1‑150 (MQ=255) aaaGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACGGTGTAGGTGCGGTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATa < 1:454389/147‑1 (MQ=255) aaaGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATaaaa > 1:1321887/1‑150 (MQ=255) aaGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAAt < 1:845474/151‑1 (MQ=255) aaaacaTTCCCAGTGTGGTTATTTGTTACACATGGGGGCGAGAAATGTAATGACAGTGTAGGTGGGGTT‑A‑C‑TGTCGTAAAAAAAAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATa < 1:107455/147‑1 (MQ=255) aacttccacaGTGTGGTTTTTTGTTACACATAGGGGCGAGAAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacg < 2:545075/145‑1 (MQ=255) aacaTTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAacg > 2:379579/1‑151 (MQ=255) cacaGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGcc > 2:798146/1‑151 (MQ=255) acaGTGTGTTTTTTTTTAACAAAGGGGGGCGGACAATTACATGGCGGTGT‑GGGGGGGTT‑ACC‑GGTGGAAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCg < 2:1210739/151‑1 (MQ=255) gtgGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCt > 2:1130364/1‑151 (MQ=255) ggTTATTTGTTACACATGGGGGCGAGCAATGTCATGACAGTGTAGGTGCGTTT‑A‑C‑TGTCGTAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGcc < 2:598886/143‑1 (MQ=255) tttttttttACAGAGGGGGGAGAACAATGTAAAGACAGTGTAGGTGCGGTT‑G‑CGTGCCG‑AAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCtt < 2:461107/145‑1 (MQ=255) ttATTTGTAACAAAGGGGGGCGAAAAATGTCATGAAGGTGGAGGTGCGTTT‑A‑C‑TGGCGTAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCa < 2:668450/150‑1 (MQ=255) tttGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCtt > 1:230294/1‑151 (MQ=255) tttGTAACACAGGGGGGGGAAAAATGTAATAACGGTGTGGGTGGGTTT‑A‑C‑TGTGGAAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAg < 2:308849/148‑1 (MQ=255) tGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAt > 1:703393/1‑151 (MQ=255) ttACACATGGGGGCAACAAATGTCATGACGGGGTGGGTGGGTTT‑A‑C‑‑GTTGTAAAAAAAAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAt < 2:458059/149‑1 (MQ=255) tACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTg > 2:1268609/1‑150 (MQ=255) acacATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGAt > 1:81025/1‑151 (MQ=255) acaaaggggggCGACAAATTTAAAGACGGTGGAGGGGGGTTT‑C‑C‑TGTGGAAAAAAAAAAAAAAAC‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTAt < 2:1097387/140‑1 (MQ=255) aaaagggggCGAGAAATGTAATGACAGGGTGGGTGGGTTT‑A‑C‑TGTCGTGAAAAAAAAAAAAAC‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTg < 1:174643/142‑1 (MQ=255) ggggggaaaaaTGTAATGAAAGTGTGGGTGGGTTT‑A‑G‑TGTCGTAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCtttt < 2:342251/142‑1 (MQ=255) ggggCGAGAAATGTCATGACAGTGTGGGTGGGTTT‑A‑C‑TGTCGGAAAAAAAAAAAAAAC‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCtttt < 1:924554/151‑1 (MQ=255) gAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGATAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTtttttctt > 2:1159849/1‑151 (MQ=255) caataacgttgtgGGTGCGTTT‑T‑C‑TCTC‑TAAAAAACAAAAAAAACCCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACtt < 1:363773/142‑1 (MQ=255) tGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGACTCCTTTTTTCTTTTTCACTTCTg > 1:1167840/1‑151 (MQ=255) gACGGTGTGGGTGGGTTT‑A‑C‑TGTCGTAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGt < 1:801008/151‑1 (MQ=255) aCAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGtt > 2:277724/1‑151 (MQ=255) aCAGTGGAGGTGGGTTT‑A‑T‑TGGCGGAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACt < 1:1223628/145‑1 (MQ=255) cAGTGT‑GGTGGGGTTAA‑C‑TGTCGTAAAAAAAAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCa < 1:896929/142‑1 (MQ=255) ggggCGGTT‑T‑C‑TGTCGAAAAAAAAAAAAAAAC‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGa < 2:109564/148‑1 (MQ=255) tGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAAc > 1:84380/1‑151 (MQ=255) gCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAAc > 2:1097953/1‑150 (MQ=255) gttt‑A‑C‑TGTCGAAAAAAACAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACaa < 1:163828/148‑1 (MQ=255) ttattggttaaaaaaaCAAAAAAAC‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGAAAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAAc < 1:802806/139‑1 (MQ=255) gTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATATTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGATGAACAAACGgctgc > 2:328090/1‑151 (MQ=255) attaaaaaaaCAAAAAAAACCCGCCATTGCAACAATGGCGCAATGCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGgct < 2:480579/144‑1 (MQ=255) aaaaaCAAAAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCg < 1:490386/150‑1 (MQ=255) aaaCAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCa > 2:426276/1‑150 (MQ=255) aaCAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCaa > 1:1203269/1‑150 (MQ=255) tAAAAA‑CCGCCAGTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCGCGCAAAACCTg > 2:97524/1‑151 (MQ=255) | AAAAAGAGGAAGATACTGACTAACTCTAAAGTGGTATTTTACATGCACTTACAATTGATTAAAGACAACATTCACAGTGTGGTTATTTGTTACACATAGGGGCGAGCAATGTCATGACAGTGTAGGTGCGGTT‑A‑C‑TGTCGTGAAAAACAATAAAAA‑CCGCCATTGCAACAATGGCGCAATTCGGATGAAGCCCCTATGACAAGGATAAAAATAAACGCACGCCGTATCTTCAGCTTATTGATTCCTTTTTTCTTTTTCACTTCTGTTCACGCTGAACAAACGGCTGCTCCCGCAAAACCTG > NC_000913/4287569‑4287869 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |