Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	2,804,864	Δ13 bp	coding (50‑62/1203 nt)	proV →	glycine betaine/proline ABC transporter periplasmic binding protein

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2804864	2804876	13	85 [0]	[0] 85	proV	glycine betaine/proline ABC transporter periplasmic binding protein

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2804863	0 (0.000)	83 (1.090)	70/286	0.1	100%	coding (49/1203 nt)	proV	glycine betaine/proline ABC transporter periplasmic binding protein
	?	NC_000913	2804877 =	0 (0.000)					coding (63/1203 nt)	proV	glycine betaine/proline ABC transporter periplasmic binding protein

TCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGT  >  NC_000913/2804713‑2805012                                                                                                                                                       |                                                                                                                                                      tCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGC                                                                                                                                                       >  1:338065‑M1/1‑151 (MQ=255)   aGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgt                                                                                                                                                     <  1:581968‑M1/151‑3 (MQ=255)    ggggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAGATTAAAAATCTTTATAAAATATTTGGCGAGCgtt                                                                                                                                                    >  1:996614‑M1/1‑148 (MQ=255)    ggggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgtt                                                                                                                                                    <  1:911851‑M1/151‑4 (MQ=255)      ggTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttca                                                                                                                                                  <  2:382367‑M1/151‑6 (MQ=255)       gTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaa                                                                                                                                                 <  1:266266‑M1/151‑7 (MQ=255)          gCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaata                                                                                                                                              <  1:323075‑M1/151‑10 (MQ=255)          gCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaat                                                                                                                                               <  2:96360‑M1/150‑9 (MQ=255)           ccTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatat                                                                                                                                             >  2:851060‑M1/1‑141 (MQ=255)            cTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatat                                                                                                                                             >  2:547640‑M1/1‑140 (MQ=255)              cAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatc                                                                                                                                          <  2:291819‑M1/151‑14 (MQ=255)                gATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcga                                                                                                                                        <  1:826411‑M1/151‑16 (MQ=255)                gATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcga                                                                                                                                        <  1:383695‑M1/151‑16 (MQ=255)                   tctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaac                                                                                                                                      >  1:1069642‑M1/1‑133 (MQ=255)                   tctcAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaac                                                                                                                                      >  1:779184‑M1/1‑133 (MQ=255)                      cAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaag                                                                                                                                   <  1:1067486‑M1/150‑21 (MQ=255)                       aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaagga                                                                                                                                 <  1:923432‑M1/151‑23 (MQ=255)                       aGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaagg                                                                                                                                  >  1:157461‑M1/1‑129 (MQ=255)                        gTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggac                                                                                                                                >  2:742440‑M1/1‑128 (MQ=255)                         tATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggact                                                                                                                               >  1:466676‑M1/1‑127 (MQ=255)                           tGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggacttt                                                                                                                             >  1:767560‑M1/1‑125 (MQ=255)                              tAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttca                                                                                                                           >  2:1237808‑M1/1‑122 (MQ=255)                                gggTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaa                                                                                                                        <  2:1190748‑M1/151‑32 (MQ=255)                                     gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaaca                                                                                                                   <  2:20897‑M1/151‑37 (MQ=255)                                     gAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaac                                                                                                                    >  2:410459‑M1/1‑115 (MQ=255)                                       aaaaaGAGACTATTTCGATTGGGGAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaa                                                                                                                  >  1:535096‑M1/1‑113 (MQ=255)                                        aaaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaat                                                                                                                <  1:108458‑M1/151‑40 (MQ=255)                                         aaaGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaatt                                                                                                               <  1:526535‑M1/151‑41 (MQ=255)                                         aaaGCGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaatt                                                                                                               >  2:1103486‑M1/1‑111 (MQ=255)                                           aGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattct                                                                                                             <  1:454153‑M1/151‑43 (MQ=255)                                           aGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattct                                                                                                             >  1:412802‑M1/1‑109 (MQ=255)                                            gTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctg                                                                                                            <  1:447544‑M1/151‑44 (MQ=255)                                              gACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctgga                                                                                                          <  2:155291‑M1/151‑46 (MQ=255)                                                  aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaa                                                                                                       >  2:737975‑M1/1‑102 (MQ=255)                                                  aTTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaa                                                                                                       >  1:177720‑M1/1‑102 (MQ=255)                                                    ttCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaa                                                                                                     <  1:338048‑M1/150‑51 (MQ=255)                                                         ttGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactggg                                                                                                >  1:415971‑M1/1‑95 (MQ=255)                                                               aaTATATCGACATAGACAAATAAAGGAATTTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcg                                                                                          <  2:694602‑M1/150‑62 (MQ=255)                                                               aaTATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcg                                                                                          <  2:809357‑M1/150‑62 (MQ=255)                                                               aaTATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcg                                                                                          <  2:766600‑M1/150‑62 (MQ=255)                                                                 tatatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgctt                                                                                       >  1:204238‑M1/1‑87 (MQ=255)                                                                 tatatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgctt                                                                                       >  1:1156877‑M1/1‑87 (MQ=255)                                                                  atatCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTT‑GCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttg                                                                                      <  1:1150356‑M1/150‑66 (MQ=255)                                                                      cGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcg                                                                                   <  2:973028‑M1/150‑69 (MQ=255)                                                                            aGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaa                                                                               >  2:321355‑M1/1‑76 (MQ=255)                                                                            aGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaa                                                                               >  2:147959‑M1/1‑76 (MQ=255)                                                                             gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                                                           <  2:1111478‑M1/151‑77 (MQ=255)                                                                             gACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                                                           <  1:1084909‑M1/151‑77 (MQ=255)                                                                              aCAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacg                                                                          <  2:491594‑M1/151‑78 (MQ=255)                                                                                aaaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgcc                                                                        <  1:511923‑M1/151‑80 (MQ=255)                                                                                aaaTAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCGTTATAAAATATTTGGCGAGCgtttaaatatatcgaacaatgcctttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagac                                                                           <  1:1218694‑M1/148‑77 (MQ=255)                                                                                   tAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagt                                                                     >  1:126664‑M1/1‑69 (MQ=255)                                                                                    aaaGGAATCTTTCTATTGCATGGCAATTAACTTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtc                                                                    <  2:675985‑M1/151‑84 (MQ=255)                                                                                     aaGGAATATTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtc                                                                    >  1:202871‑M1/1‑67 (MQ=255)                                                                                       ggAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctgg                                                                 <  1:210651‑M1/151‑87 (MQ=255)                                                                                        gAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctgg                                                                 >  2:303503‑M1/1‑64 (MQ=255)                                                                                              ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattg                                                           <  1:994212‑M1/150‑93 (MQ=255)                                                                                              ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattg                                                           <  1:387137‑M1/150‑93 (MQ=255)                                                                                              ttCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccat                                                             <  1:663346‑M1/148‑91 (MQ=255)                                                                                               tCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattga                                                          <  1:431861‑M1/150‑94 (MQ=255)                                                                                               tCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccatt                                                            <  2:1199328‑M1/148‑92 (MQ=255)                                                                                                cTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattg                                                           <  1:798087‑M1/148‑93 (MQ=255)                                                                                                    tGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaagg                                                    >  2:1137451‑M1/1‑52 (MQ=255)                                                                                                    tGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaag                                                     <  1:57544‑M1/150‑99 (MQ=255)                                                                                                     gCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaagg                                                    <  1:1194665‑M1/150‑100 (MQ=255)                                                                                                      cATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcg                                                  >  2:241513‑M1/1‑50 (MQ=255)                                                                                                                aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt                                        <  2:59234‑M1/151‑112 (MQ=255)                                                                                                                aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt                                        >  2:668078‑M1/1‑40 (MQ=255)                                                                                                                aaattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgt                                        <  2:866861‑M1/151‑112 (MQ=255)                                                                                                                 aattaGAAATTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtc                                       <  1:940001‑M1/151‑113 (MQ=255)                                                                                                                     aGAAATTAAAAATCTTTATAAAATATTTGCCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatc                                    >  1:440765‑M1/1‑35 (MQ=255)                                                                                                                        aaTTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgg                                <  2:48629‑M1/151‑120 (MQ=255)                                                                                                                         aTTAAAAATCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatggg                               <  1:1147831‑M1/151‑121 (MQ=255)                                                                                                                             aaaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggatt                            <  2:49512‑M1/150‑124 (MQ=255)                                                                                                                             aaaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggatt                            >  1:186584‑M1/1‑27 (MQ=255)                                                                                                                              aaaTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattat                          <  2:198806‑M1/151‑126 (MQ=255)                                                                                                                                aTCTTTATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatcc                        >  2:862329‑M1/1‑24 (MQ=255)                                                                                                                                    ttATAAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccg                       <  2:996668‑M1/148‑129 (MQ=255)                                                                                                                                      ataAAATATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcg                  <  2:222889‑M1/151‑134 (MQ=255)                                                                                                                                        aaaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcggg                >  1:1043431‑M1/1‑16 (MQ=255)                                                                                                                                        aaaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcggg                >  1:660450‑M1/1‑16 (MQ=255)                                                                                                                                         aaaTATTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggt               <  2:11663‑M1/151‑137 (MQ=255)                                                                                                                                             atTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaat           >  2:33907‑M1/1‑11 (MQ=255)                                                                                                                                             atTTGGCGAGCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaat           <  2:338075‑M1/151‑141 (MQ=255)                                                                                                                                                      gCgttcaaatatatcgaacaaggactttcaaaagaacaaattctggaaaaaactgggctatcgcttggcgtaaaagacgccagtctggccattgaagaaggcgagatatttgtcatcatgggattatccggctcgggtaaatccacaatgg  >  1:654240‑M1/1‑2 (MQ=255)                                                                                                                                                       |                                                                                                                                                      TCAGGGGTTGCCTCAGATTCTCAGTATGTTAGGGTAGAAAAAAGTGACTATTTCCATTGGGTAATATATCGACATAGACAAATAAAGGAATCTTTCTATTGCATGGCAATTAAATTAGAAATTAAAAATCTTTATAAAATATTTGGCGAGCATCCACAGCGAGCGTTCAAATATATCGAACAAGGACTTTCAAAAGAACAAATTCTGGAAAAAACTGGGCTATCGCTTGGCGTAAAAGACGCCAGTCTGGCCATTGAAGAAGGCGAGATATTTGTCATCATGGGATTATCCGGCTCGGGT  >  NC_000913/2804713‑2805012

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑