Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,957,831 IS5 (–) +4 bp coding (1051‑1054/2889 nt) ptrA ← protease III

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2957831 =0 (0.000)54 (1.060) 46/298 0.2 100% coding (1054/2889 nt) ptrA protease III
?NC_000913 3130146 = NA (NA)noncoding (1/1195 nt) IS5 repeat region
* ? NC_000913 = 29578340 (0.000)53 (1.040) 44/298 0.3 100% coding (1051/2889 nt) ptrA protease III
?NC_000913 = 3131340 NA (NA)noncoding (1195/1195 nt) IS5 repeat region

Only 100 of 109 total aligned reads displayed.

AGTCGATATCCAGCACATTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACGGAACTTCGC  >  NC_000913/2957687‑2957984
                                                                                                                                                   |                                                                                                                                                      
aGTCGATACCCAGCACTTTCGCAAGTTCTTCGAAGTATTGTTTATCAATGCCTTTTTCAGGTAACAGATTGAGATACCTAAAATTTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTaa                                                                                                                                                        <  1:655096/148‑1 (MQ=255)
  aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATAcgc                                                                                                                                                   <  1:457402‑M1/9‑1 (MQ=255)
    gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATAcgccg                                                                                                                                                 <  1:505502‑M1/11‑1 (MQ=255)
      aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCt                                                                                                                                               <  1:393107‑M1/13‑1 (MQ=255)
      aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCt                                                                                                                                               >  1:252430‑M1/139‑151 (MQ=255)
         tctcttttctggtatgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGtt                                                                                                                                            <  1:164563‑M1/16‑1 (MQ=255)
         ccAGCACTTTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcga                                                                                                                                             <  2:718014‑M1/150‑12 (MQ=255)
         ccAGCACATTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcga                                                                                                                                             >  2:626470‑M1/1‑139 (MQ=255)
           aGCACATTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaat                                                                                                                                           >  1:507935‑M1/1‑137 (MQ=255)
           aGCACATTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaat                                                                                                                                           >  2:41845‑M1/1‑137 (MQ=255)
            cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGtt                                                                                                                                            >  2:723632‑M1/133‑148 (MQ=255)
               caTTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagc                                                                                                                                       <  2:494376‑M1/150‑18 (MQ=255)
                    gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACg                                                                                                                                  <  1:706637‑M1/26‑1 (MQ=255)
                    gCCAGTTCATCGAAGTTTTGTTTATCAAGGCCTTTTTCACGTAAAAGATTGATATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaa                                                                                                                                 <  1:562501‑M1/151‑24 (MQ=255)
                     tctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGAt                                                                                                                                <  2:346783‑M1/28‑1 (MQ=255)
                      ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGAt                                                                                                                                <  1:288579‑M1/28‑1 (MQ=255)
                      ctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGAt                                                                                                                                <  2:481742‑M1/28‑1 (MQ=255)
                       aGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaatt                                                                                                                              <  1:619529‑M1/151‑27 (MQ=255)
                        gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaccccttttctatggcttcagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTCCCGTTGACGAt                                                                                                                                >  2:342794‑M1/121‑148 (MQ=255)
                           ggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATc                                                                                                                          >  1:751379‑M1/118‑151 (MQ=255)
                            gcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCg                                                                                                                         >  1:457105‑M1/117‑151 (MQ=255)
                             tCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                        >  1:471213‑M1/1‑119 (MQ=255)
                                aaGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcgg                                                                                                                      <  2:639630‑M1/150‑35 (MQ=255)
                                 aGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                    >  1:51120‑M1/1‑115 (MQ=255)
                                  actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGtt                                                                                                                    >  1:326232‑M1/111‑150 (MQ=255)
                                   tATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctg                                                                                                                   >  2:92488‑M1/1‑113 (MQ=255)
                                   tATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggct                                                                                                                    <  1:407887‑M1/149‑37 (MQ=255)
                                   ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGtt                                                                                                                    >  2:779277‑M1/110‑149 (MQ=255)
                                   ctgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTgg                                                                                                                  <  1:4281‑M1/42‑1 (MQ=255)
                                     gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcgccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGgcg                                                                                                                >  2:688312‑M1/108‑151 (MQ=255)
                                     gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGgcg                                                                                                                >  1:157115‑M1/108‑151 (MQ=255)
                                     gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGgcg                                                                                                                >  1:202808‑M1/108‑151 (MQ=255)
                                        tttATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactc                                                                                                               >  2:512057‑M1/1‑108 (MQ=255)
                                             cAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        >  2:474522‑M1/1‑103 (MQ=255)
                                             cAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatt                                                                                                        >  2:493109‑M1/1‑103 (MQ=255)
                                              actgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGccc                                                                                                       <  2:360087‑M1/53‑1 (MQ=255)
                                                  ccTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatt                                                                                                   <  2:562752‑M1/151‑54 (MQ=255)
                                                         cACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc                                                                                              <  1:365106‑M1/149‑59 (MQ=255)
                                                          aCGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatg                                                                                           >  1:116399‑M1/1‑90 (MQ=255)
                                                           gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCt                                                                                          >  1:675196‑M1/86‑151 (MQ=255)
                                                           cGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                          >  1:650855‑M1/1‑89 (MQ=255)
                                                              agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCt                                                                                       >  1:391044‑M1/83‑151 (MQ=255)
                                                              agttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCt                                                                                       >  2:73736‑M1/83‑151 (MQ=255)
                                                               gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCtt                                                                                      <  1:315574‑M1/70‑1 (MQ=255)
                                                                 tgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCttt                                                                                     >  2:444051‑M1/80‑150 (MQ=255)
                                                                 aGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc                                                                                    <  2:643452‑M1/151‑69 (MQ=255)
                                                                  gatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCtttt                                                                                    >  2:294197‑M1/79‑150 (MQ=255)
                                                                  gATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGCTTAGCCAGGCCTTTATAGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     >  2:664127‑M1/1‑82 (MQ=255)
                                                                   aTTGAGATAGCTAAAAATTGCCGCCACAACCTAATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  >  2:328773‑M1/1‑81 (MQ=255)
                                                                    ttGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgag                                                                                     <  1:605919‑M1/147‑68 (MQ=255)
                                                                     tGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgat                                                                                >  1:764476‑M1/1‑79 (MQ=255)
                                                                     tGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                                  <  2:582139‑M1/149‑71 (MQ=255)
                                                                     gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGc                                                                                  <  1:547524‑M1/74‑1 (MQ=255)
                                                                     gactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGc                                                                                  <  1:241611‑M1/74‑1 (MQ=255)
                                                                       ctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGcc                                                                              <  1:265062‑M1/78‑1 (MQ=255)
                                                                         catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGcc                                                                              >  2:594904‑M1/72‑149 (MQ=255)
                                                                             cTAAAATTTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct                                                                         <  2:453192‑M1/150‑80 (MQ=255)
                                                                             cTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                        >  2:698597‑M1/1‑71 (MQ=255)
                                                                                 aaaTTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                    >  2:761204‑M1/1‑67 (MQ=255)
                                                                                  aaTTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgt                                                                    >  2:492848‑M1/1‑66 (MQ=255)
                                                                                   aTTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                                   >  1:241677‑M1/1‑65 (MQ=255)
                                                                                     tGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaat                                                                >  1:176948‑M1/1‑63 (MQ=255)
                                                                                      gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTAc                                                               <  2:259651‑M1/93‑1 (MQ=255)
                                                                                      gccgccACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg                                                               >  1:213007‑M1/1‑62 (MQ=255)
                                                                                         gccACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcct                                                            >  1:774052‑M1/1‑59 (MQ=255)
                                                                                           atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTggg                                                          <  1:562529‑M1/98‑1 (MQ=255)
                                                                                           atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTgg                                                           >  1:731136‑M1/54‑150 (MQ=255)
                                                                                             ggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCt                                                        <  2:280423‑M1/100‑1 (MQ=255)
                                                                                              aaCCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttcgcccgtaaatgccttgaat                                                       <  1:431141‑M1/151‑98 (MQ=255)
                                                                                               aCCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatc                                                      <  1:558258‑M1/151‑99 (MQ=255)
                                                                                                  cagatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGAt                                                   <  2:557717‑M1/105‑1 (MQ=255)
                                                                                                   agatgacaaacatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGAtt                                                  >  1:608106‑M1/46‑151 (MQ=255)
                                                                                                            acatgatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATc                                           >  2:47915‑M1/37‑149 (MQ=255)
                                                                                                             aGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagacc                                        <  1:598851‑M1/151‑113 (MQ=255)
                                                                                                                gatctcatatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATa                                      >  2:332354‑M1/33‑150 (MQ=255)
                                                                                                                cAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                     <  1:630615‑M1/151‑116 (MQ=255)
                                                                                                                cAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtt                                     >  2:715740‑M1/1‑36 (MQ=255)
                                                                                                                 aGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                                    >  2:726278‑M1/1‑35 (MQ=255)
                                                                                                                   gCCTTTATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttct                                  <  2:643440‑M1/151‑119 (MQ=255)
                                                                                                                      atatcagggacttgttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATc                               <  2:556063‑M1/125‑1 (MQ=255)
                                                                                                                       ttATCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg                               <  1:329556‑M1/150‑122 (MQ=255)
                                                                                                                          tCGGTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                           >  2:636439‑M1/1‑26 (MQ=255)
                                                                                                                             gTTAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        <  1:145583‑M1/151‑129 (MQ=255)
                                                                                                                              ttAAAGACGCAGAGATCGCTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                        >  2:135627‑M1/1‑22 (MQ=255)
                                                                                                                                    ttcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGtttt                 <  1:700030‑M1/139‑1 (MQ=255)
                                                                                                                                     tcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGtttt                 <  2:379699‑M1/139‑1 (MQ=255)
                                                                                                                                     tcgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGttt                  >  1:356431‑M1/12‑149 (MQ=255)
                                                                                                                                      cgcaccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTtac               <  1:732560‑M1/141‑1 (MQ=255)
                                                                                                                                        caccttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTGATCAATTCATCGGTTTtacta             >  2:34137‑M1/9‑151 (MQ=255)
                                                                                                                                         accttccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTAACTGGGCTGCGATTGCCAATCAGATAGGTAATCTATTCATCGGTTTtact              <  2:147897‑M1/142‑1 (MQ=255)
                                                                                                                                             tccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACgg          >  1:346786‑M1/4‑149 (MQ=255)
                                                                                                                                             tccCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACGGa         <  2:45896‑M1/147‑1 (MQ=255)
                                                                                                                                                cTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     >  2:275235‑M1/1‑4 (MQ=255)
                                                                                                                                                cTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACGGAACtt     >  1:216293/1‑151 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:360566‑M1/1‑3 (MQ=255)
                                                                                                                                                 tAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt    >  2:752114‑M1/1‑3 (MQ=255)
                                                                                                                                                 tAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACGGAACTTc    >  1:784562/1‑151 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttta   <  1:337678‑M1/151‑150 (MQ=255)
                                                                                                                                                  aaggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt     <  1:422665‑M1/149‑148 (MQ=255)
                                                                                                                                                   aggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag  <  1:370642‑M1/151‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
AGTCGATATCCAGCACATTCGCCAGTTCATCGAAGTATTGTTTATCAATGCCTTTTTCACGTAACAGATTGAGATAGCTAAAAATTGCCGCCACAACCTGATCGCGATTAGCCAGGCCTTTATCGGTTAAAGACGCAGAGATCGCTAATACGCCGCTGTTGCCGTTGACGATAGGATCGGAGTTGGCGCTAATGCCCTCAACTAATCCCTGCTTTTGCAGCCAGTCAGAAAGTGTACCTGGGCTGCGATTGCCAATCAGATAGGTAATCAATTCATCGGTTTTACTACGGAACTTCGC  >  NC_000913/2957687‑2957984

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.