| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,434,861 | 0 | G | T | 43.0% | 118.4 / 48.1 | 86 | P259Q (CCA→CAA) | truA | tRNA pseudouridine(38‑40) synthase |
| Reads supporting (aligned to +/- strand): ref base G (14/35); new base T (37/0); total (51/35) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.78e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTG > NC_000913/2434717‑2435010 | cGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGa < 2:43484/150‑1 (MQ=255) gATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGaa > 2:637607/1‑147 (MQ=255) tGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCa > 1:409166/1‑150 (MQ=255) gAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGGAGATCAt > 1:676263/1‑150 (MQ=255) aGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGgagaatcta > 1:160681/1‑145 (MQ=255) aGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATAc < 1:91208/151‑1 (MQ=255) gAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGGTTTTTGGAAgttatacc > 1:26508/1‑143 (MQ=255) gAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATaac > 1:649041/1‑148 (MQ=255) ataaatCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCGGTc > 2:1052897/1‑151 (MQ=255) taaatCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGAGCATACCCGt > 1:537025/1‑149 (MQ=255) aaatCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGgagaatattaccg > 1:605320/1‑138 (MQ=255) aaatCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCa < 1:645986/150‑1 (MQ=255) atCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAggg < 1:286845/151‑1 (MQ=255) cAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAggg > 1:981583/1‑149 (MQ=255) aGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGAATATACCCGTCAggg > 2:1210177/1‑148 (MQ=255) gTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCGGGCCGGGGaa > 1:359593/1‑149 (MQ=255) gTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑GTTTGGAAGATCATACCGGTCAGGGGaa > 2:875738/1‑149 (MQ=255) tatTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGGTTCTAACGGGCCCGGTAATTCAcc > 1:631182/1‑150 (MQ=255) tatTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCCGGCAGGGGAAACCAc > 1:1037875/1‑149 (MQ=255) tatTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATAATAACCGGCAGGGGAAaccacc > 1:238918/1‑150 (MQ=255) atTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGTCAGGGGAATCCACcgc > 2:1223738/1‑151 (MQ=255) tGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATAACGGTCAGGGTAATCCAcccc > 1:582459/1‑146 (MQ=255) gCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑a < 1:497427/149‑1 (MQ=255) gCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑Ac < 1:551063/150‑1 (MQ=255) aTGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAg < 1:1007028/149‑1 (MQ=255) tGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGGCCGGGGAATCCACCGCG‑Acc > 1:1149038/1‑146 (MQ=255) ccTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACa < 1:753573/151‑1 (MQ=255) tGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAg < 2:837186/149‑1 (MQ=255) tACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGTCAGGGGAATCCACCCCG‑ACCAGATACAG‑ccc > 2:157118/1‑150 (MQ=255) tACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCAAACCGGGCAGGGGAATCCACCGCG‑ACCAGATACAG‑ccc > 1:895472/1‑150 (MQ=255) aCTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGGCCGGGGAATCCACCGCG‑ACCAAAAACAG‑ccc > 2:502360/1‑149 (MQ=255) aCTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑CTTTGGAAAAACAAACCGGTTAGGGGAATTCACCCCG‑AACAAATACAG‑CCCt > 2:629583/1‑150 (MQ=255) gTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGGCAGGGGAATCCACCGCG‑ACCAGATACAG‑CCCTTCCg > 2:658734/1‑150 (MQ=255) cTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGGAGATCATACCGGTCAGGGGAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCtttt > 2:501488/1‑150 (MQ=255) ttCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCtttt < 2:896687/148‑1 (MQ=255) cAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑GTTTTTAAGATCATACCGGGCCAGGTAATCCACCGCG‑GCCCGAAACAGACCCTCCCCCttttc > 1:723945/1‑147 (MQ=255) aGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCCGTGCGGGGAATACACCCCG‑ACCAGAAACAA‑CCCCTCCGCTTTTTcc > 2:435522/1‑148 (MQ=255) aGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCCGGCAGGGGAATCCACCCCG‑ACCAGATACAG‑CCCCTCCCCCTTTTCCGtt > 1:161755/1‑151 (MQ=255) tAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGGCAGGGGAAATCACCCCG‑ACCAGATACAA‑CCCTTCCCCTTTTTCCGCTGCTgcc > 2:941457/1‑151 (MQ=255) aaCTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTgccg < 1:1126039/151‑1 (MQ=255) cTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCGGGCAGGGGAATACACCCCG‑ACCCGATACAC‑GCCTTCCGCCTTTTCCGTTGCTgccgcc > 1:547133/1‑151 (MQ=255) aCGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCGGTCAGGGGAATTCACCCCG‑ACCAGATAAAA‑CCCTTCCCCTTTTTCCGTTGCTgccgcc > 1:791646/1‑149 (MQ=255) aCGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCa < 2:537026/150‑1 (MQ=255) ttGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑CTTTGGGAAATTATACCCGACAGGGGAAATCACCCCC‑GCCAGAATCAA‑CCCCTCCCCTTTTGCCGTTTCCGCCCCCAGCGt > 2:232743/1‑151 (MQ=255) ggCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGTAGATTATACCGGTCCGGGGAAAACACCCCG‑ACAAGATACAA‑CGCTTCCCGTTTTTTCGTTGCTgccgcccccg > 1:787800/1‑144 (MQ=255) ggCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTc < 1:942662/151‑1 (MQ=255) cTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCCGTCAGGGGAATCCACCCCG‑AACCGATACAA‑CCCTTCCTCTTTTGCCGGTGCTGCCGCCAGccgtc > 1:227637/1‑145 (MQ=255) aCAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGt < 1:1093823/150‑1 (MQ=255) ccTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGGAGATCATACCCGTCAGGGGAATCCACCGCG‑ACCAGATACAA‑CCCTTCCGCTTTTTCCGTTGCTGCCGCCAGCGGTCTGTCCttt > 2:269452/1‑151 (MQ=255) ccTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCttt < 2:738498/151‑1 (MQ=255) tGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCGGGCAGGGGAAACCACCGCG‑ACCAGATACAG‑CCCCTCCGCCTTTGCCGTTGCTGCCGCCAGCGGTCTGTCCttt > 1:552207/1‑149 (MQ=255) tGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATAACCGACCCGGGAATCCACCCCC‑ACCAGATACAG‑CCCTTCCGCCTTTTCCCCTGCTTCCGCCACCGTTCTGTCCctt > 2:685653/1‑149 (MQ=255) gAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCCGGCCGGGGAATCCACCCCG‑GCCAGATACAA‑CCCCTCCCCTTTTTCCGTTGCTGCCGCCAGCGTTCTGTCCttt > 1:836649/1‑148 (MQ=255) ttCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCCGTCAGGGGAATCCACCGCG‑ACCAGATACAG‑CCCCTCCGCTTTTGCCGTTGCTGCCGCCAGCGGTCTTTCCTTTGccgcccgc > 1:1068074/1‑151 (MQ=255) ttCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCCGGCAGGGGAATTCACCCCG‑ACCAGATACAG‑CCCTTCCGCTTTTTCCGTTGCTGCCGCCCGCGGTTTTTCCCTTgccccc > 1:652501/1‑148 (MQ=255) ccGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCCGTCAGGGGAATCCACCCCG‑CCCAGATACAG‑CCCCTTCCCTTTTTCCCTTGCTGCCGCCCACGGTCTGTCCTTTGCCCCCAGCa > 1:853793/1‑150 (MQ=255) cGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGGAGAAAAAACCCGTCCGGGGTAAAAACCTCGCCCCGGAAAACG‑CCCTT‑CTCTTTTTCCGTTGCCGCGCCCCGCGTTCTGTTCtt > 2:422692/1‑138 (MQ=255) gAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATCATACCGGGCAGGGTAATACACCGCG‑ACCAGATACAA‑CCCTTCCGCCTTTGCCGGTGCTGCCCCCCGCGGTCTGTCCTTTTCCGCCCGCaa > 2:202638/1‑149 (MQ=255) cATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATAATACCGGGCAGGGGAATCCACCCCG‑ACCAGATACAG‑CCCTTCCCCCTTTTCCGTTGCTGCCGCCAGCGGTCTGTCCCTTTCCCCCCGCAActc > 2:1162727/1‑149 (MQ=255) attattCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAAATTATACCGGCCCGGGGAAACCCCCACG‑ACCCGATAAAG‑CCCTTTCGCCTTTGCCGGTGCGGCCGCCCGCGGTCTGTTCTTTtccgcccccc > 1:148091/1‑140 (MQ=255) attattCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTTGAAGATCATACCCGTCAGGGGAATCCACCCCG‑ACCCGATAAAG‑CCCTTCCGCTTTTGCCGTTGCTGCCCCCCGCGCTCTGTCCTTTGCCGCCCGCAActc > 2:458926/1‑148 (MQ=255) attCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTa < 1:247289/150‑1 (MQ=255) attCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTAt < 2:1080252/151‑1 (MQ=255) ctcGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATc < 2:736405/149‑1 (MQ=255) cGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCa < 1:729367/149‑1 (MQ=255) cGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGc < 2:1126469/151‑1 (MQ=255) cGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCACCAGCAACTCTGCTATCCAGc < 2:1038612/151‑1 (MQ=255) ttAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGct < 1:1078893/150‑1 (MQ=255) cGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGc < 2:416534/151‑1 (MQ=255) ccAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGAACATACCCGGCAGGGGAATTCACCCCG‑GCCAGAAACAA‑CCCCTCCCCTTTTTCCGTTGCTGCCCCCCGCGGTCTTTTCCTTTCCCCCCGCAACTCCGCTATTCCGCTCTcccg > 2:153422/1‑146 (MQ=255) cAGAAATAGCGGGCCCATTGGCGG‑TTTTTGGAGATTATACCGGGCAGGGGAAACCACCCCG‑ACCAGATACAA‑CCCCTCCCCTTTTTCCGGTTCTGCCCCCCGCGGTCTGTCCTTTGCCGCCCGCCACCCTGCTATCCAGCTCCCCGGCTgg > 1:1198106/1‑151 (MQ=255) gAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGtt < 1:878758/151‑1 (MQ=255) gAAATAGCGGGCCCATTGGCGG‑CTTTTGGAGAACAAACCGGTCAGGGTAATCCACCCCC‑GCCACAAACAG‑CCCTTCCGCTTTTGCCGTTTCTTCCCCCCGCGGTCTGGCCTTTTCCGCCAGCAACTCTTCTTTCCAGCTCTcccggtg > 2:414267/1‑143 (MQ=255) aTAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTtgtg < 2:198597/151‑1 (MQ=255) aTAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTtgtg < 1:422691/151‑1 (MQ=255) aGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTgg < 2:1078672/150‑1 (MQ=255) cGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCa < 2:432106/151‑1 (MQ=255) cGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCa < 1:941451/151‑1 (MQ=255) ggCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCAcc < 2:579170/151‑1 (MQ=255) cATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACt < 1:234690/151‑1 (MQ=255) gCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCAt < 2:241023/151‑1 (MQ=255) g‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAg < 2:674459/151‑1 (MQ=255) tttGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAgg < 1:1095492/150‑1 (MQ=255) ttGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGc > 1:307971/1‑150 (MQ=255) tGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCt < 1:338256/150‑1 (MQ=255) tGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTg > 2:328116/1‑151 (MQ=255) | CGATGAGGAAATAAATCAGGTCCATATTTGCCTATGCCTTGTACTCGTCATCTTTCAGGCTGTAACTACGTTGGCTACAGCCTGAAATGTTCCGAGCATTATTCTCGTTAGTCCGCCAGAAATAGCGGGCCCATTGGCGG‑TTTTGGAAGATCATACCGGTCAGGGTAATCCACCGCG‑ACCAGATACAG‑CCCTTCCGCTTTTGCCGTTGCTGCCGCCAGCGTTCTGTCCTTTGCCGCCAGCAACTCTGCTATCCAGCTCTCCGGCTGGTTGTGGGCACCGACTTCCATCAGGCTG > NC_000913/2434717‑2435010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |