Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,536,285	Δ1 bp	coding (300/720 nt)	ompR ←	response regulator in two‑component regulatory system with EnvZ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,536,285	0	G	.	100.0%	377.2 / NA	75	coding (300/720 nt)	ompR	response regulator in two‑component regulatory system with EnvZ
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base . (40/35);  total (40/35)

CGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCAGT  >  NC_000913/3536143‑3536426                                                                                                                                               |                                                                                                                                              cGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGATGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGcc                                                                                                                                       >  2:51379/1‑150 (MQ=255) cGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGcc                                                                                                                                       >  2:540737/1‑150 (MQ=255)  gAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCa                                                                                                                                      >  1:528194/1‑150 (MQ=255)   aGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAAt                                                                                                                                    >  2:26686/1‑151 (MQ=255)        aaGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTcc                                                                                                                                <  1:1043091/150‑1 (MQ=255)            ttGAACTTACCGAAAGCATTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGc                                                                                                                            <  2:452346/150‑1 (MQ=255)            ttGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGc                                                                                                                            <  2:1146063/150‑1 (MQ=255)             tGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGcc                                                                                                                           <  2:501466/150‑1 (MQ=255)             tGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCt                                                                                                                          >  2:853069/1‑151 (MQ=255)              gAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCt                                                                                                                          <  1:1140237/150‑1 (MQ=255)               aaCTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTa                                                                                                                         <  2:823188/150‑1 (MQ=255)                  ttACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGAt                                                                                                                     >  2:522115/1‑151 (MQ=255)                   tccggaaagaaaTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGAt                                                                                                                     <  1:1026819/146‑1 (MQ=255)                   tACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGAt                                                                                                                     >  2:713933/1‑150 (MQ=255)                    aCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATAc                                                                                                                   >  2:767673/1‑151 (MQ=255)                    aCCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATAc                                                                                                                   >  1:534522/1‑151 (MQ=255)                     ccGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATa                                                                                                                    <  1:114003/149‑1 (MQ=255)                        aaaGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTc                                                                                                               >  2:506880/1‑151 (MQ=255)                         aaGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTcc                                                                                                              <  1:579324/151‑1 (MQ=255)                           gCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCAc                                                                                                            >  1:606884/1‑151 (MQ=255)                           gCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCAc                                                                                                            >  1:1152512/1‑151 (MQ=255)                            cAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCAct                                                                                                           >  2:616025/1‑151 (MQ=255)                             aaTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTACACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActt                                                                                                          >  2:657762/1‑151 (MQ=255)                                tACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActtctt                                                                                                       >  1:1175988/1‑151 (MQ=255)                                          tCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTc                                                                                               <  2:753504/149‑1 (MQ=255)                                           ccTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGcc                                                                                            <  2:345135/151‑1 (MQ=255)                                            cTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCg                                                                                           >  2:33529/1‑151 (MQ=255)                                            cTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCg                                                                                           >  2:505835/1‑151 (MQ=255)                                             tgtgACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGt                                                                                          >  2:459235/1‑151 (MQ=255)                                              gtgACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCg                                                                                           <  2:906850/149‑1 (MQ=255)                                              gtgACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTc                                                                                         <  1:72324/151‑1 (MQ=255)                                                gACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCa                                                                                        <  2:996216/150‑1 (MQ=255)                                                 aCGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCAcc                                                                                      >  1:916542/1‑151 (MQ=255)                                                       cgcCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATg                                                                                <  1:92138/151‑1 (MQ=255)                                                        gcCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGa                                                                               <  2:465443/151‑1 (MQ=255)                                                        gcCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGa                                                                               <  2:777976/151‑1 (MQ=255)                                                                 ttcgttcgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCg                                                                      >  1:309434/1‑151 (MQ=255)                                                                            gacgacGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGctct                                                             <  1:166630/149‑1 (MQ=255)                                                                             acgacgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGAc                                                          <  2:271164/151‑1 (MQ=255)                                                                                   cagcaCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGACACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGaa                                                    <  2:188425/151‑1 (MQ=255)                                                                                      caCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGa                                                  <  1:388420/150‑1 (MQ=255)                                                                                      caCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGAc                                                 <  1:581637/151‑1 (MQ=255)                                                                                       aCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGAc                                                 >  1:203364/1‑150 (MQ=255)                                                                                        ccGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGt                                               >  2:446545/1‑151 (MQ=255)                                                                                         cGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTc                                              >  1:736936/1‑151 (MQ=255)                                                                                          gCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCg                                             >  1:479365/1‑151 (MQ=255)                                                                                            aCGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGc                                           >  1:108730/1‑151 (MQ=255)                                                                                            aCGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGc                                           >  1:700465/1‑151 (MQ=255)                                                                                             cGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCGATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCa                                          <  2:885328/151‑1 (MQ=255)                                                                                             cGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCa                                          <  1:427495/151‑1 (MQ=255)                                                                                             cGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCa                                          <  1:376684/151‑1 (MQ=255)                                                                                                 tACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATc                                      >  1:478296/1‑151 (MQ=255)                                                                                                    gggCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGAc                                   <  1:805910/151‑1 (MQ=255)                                                                                                    gggCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGAc                                   <  1:1169815/151‑1 (MQ=255)                                                                                                    gggCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGAc                                   >  1:581053/1‑151 (MQ=255)                                                                                                    gggCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGAc                                   >  1:704878/1‑151 (MQ=255)                                                                                                       ccAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACa                                  >  2:746235/1‑149 (MQ=255)                                                                                                       ccAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAg                                <  2:767368/151‑1 (MQ=255)                                                                                                          gcagTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCa                             <  1:155958/151‑1 (MQ=255)                                                                                                             gTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCt                          <  1:309439/151‑1 (MQ=255)                                                                                                              ttCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCtt                         >  2:569617/1‑151 (MQ=255)                                                                                                                   gcgGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCAcc                     >  1:805755/1‑150 (MQ=255)                                                                                                                    cgGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCAcc                     >  2:356344/1‑149 (MQ=255)                                                                                                                         tAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTaa               <  2:492010/150‑1 (MQ=255)                                                                                                                         tAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAAc              >  2:825005/1‑151 (MQ=255)                                                                                                                          aaaCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAAc              <  1:767678/150‑1 (MQ=255)                                                                                                                           aaCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACAt            <  2:1038671/151‑1 (MQ=255)                                                                                                                            aCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACAtt           >  2:440166/1‑151 (MQ=255)                                                                                                                            aCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACAtt           >  2:145293/1‑151 (MQ=255)                                                                                                                             cGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTa          <  2:927431/151‑1 (MQ=255)                                                                                                                               gTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTaa         >  2:358124/1‑150 (MQ=255)                                                                                                                                 tttGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATc      >  2:377166/1‑151 (MQ=255)                                                                                                                                  ttGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATcc     >  1:83091/1‑151 (MQ=255)                                                                                                                                    ggAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCAg   <  2:1030956/151‑1 (MQ=255)                                                                                                                                      aaTGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCAGt  >  1:793311/1‑150 (MQ=255)                                                                                                                                               |                                                                                                                                              CGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCAGT  >  NC_000913/3536143‑3536426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑