| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,536,285 | Δ1 bp | coding (300/720 nt) | ompR ← | response regulator in two‑component regulatory system with EnvZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,536,285 | 0 | G | . | 99.0% | 488.0 / ‑1.7 | 102 | coding (300/720 nt) | ompR | response regulator in two‑component regulatory system with EnvZ |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base . (48/53); minor base C (1/0); total (49/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 102 total aligned reads displayed.
GTACCGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCA > NC_000913/3536139‑3536424 | gTACCGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAgc > 1:302134/1‑151 (MQ=255) aCCGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAgcgc > 1:1027459/1‑151 (MQ=255) aCCGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAgcg < 1:1327437/150‑1 (MQ=255) ccGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGcc > 2:886694/1‑151 (MQ=255) ccGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGcc > 1:973405/1‑151 (MQ=255) cGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCa < 2:1265723/151‑1 (MQ=255) ggggTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCa < 2:1510590/148‑1 (MQ=255) aGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAAt > 2:807756/1‑151 (MQ=255) gtttAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCa < 1:1564033/146‑1 (MQ=255) ggTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAAtc < 2:351878/151‑1 (MQ=255) tAAGTTGGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAAtctc < 1:226881/150‑1 (MQ=255) aattttGAACTAACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCa < 2:894673/148‑1 (MQ=255) aaGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTcc < 1:59199/150‑1 (MQ=255) aGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTcc > 2:1567294/1‑149 (MQ=255) ttGGACTTATCGAAAGCAATTACCGCCTCTTCCTCCGACGGTGCGCCTCGCAGTTCGTTCGCCTAACGACCCACCACCGCACGGATACGGGCCTGCAGTTCACGCGGGTTAAACGGCTTTGGAGTGTAGGC‑TCGGCGACAGTCTcc > 2:462336/1‑146 (MQ=255) aactcccggAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTAc < 2:758483/143‑1 (MQ=255) aaCTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCt < 2:372280/149‑1 (MQ=255) cTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACg > 2:1114182/1‑150 (MQ=255) ccaaaaGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACg < 2:1027444/148‑1 (MQ=255) ccGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGa < 2:1508001/147‑1 (MQ=255) cGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACgg > 2:109694/1‑151 (MQ=255) aaggCAATTTCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGTGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATa < 2:1353970/143‑1 (MQ=255) aaaGAAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTc < 1:502089/151‑1 (MQ=255) aGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCa < 1:532065/151‑1 (MQ=255) cAATTACCGCCTCTTCCTGTGACGGCGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCAct > 1:811545/1‑151 (MQ=255) aaTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActt > 1:1545504/1‑151 (MQ=255) aaTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActt > 2:1319074/1‑151 (MQ=255) aaTTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActt > 2:1470424/1‑151 (MQ=255) atgaCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActtc < 2:527991/148‑1 (MQ=255) ttACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActtct > 2:1216140/1‑151 (MQ=255) aCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCActtctt < 1:1153633/150‑1 (MQ=255) aCCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACttcttc < 1:764540/151‑1 (MQ=255) ccctTCCTGCGACGGGGCGCCTGGCAGTTCGGTGGCCTGACGACGCAGCACCGCACGGATACGCGCCAGCAGTGCACGCGGGTTAAACGTTTTTGGCAAGTAGTC‑TCAGCGCCAATCTCGAGGCCTACGACACGGTCCACTTCTTCCCCtt > 2:1446635/3‑151 (MQ=255) ctTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTc > 1:1430159/1‑151 (MQ=255) ttCCTTTGGCGGTGGGCGTGGCTGTTCGTGCGACTGGCGACGCAGCGCCGAGCGGATACGGCCCAGCAGTTCACGCGGGTTAAACGGTCTTGGAATTGAGTC‑ACAGCGACAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCtt < 2:1085107/148‑1 (MQ=255) ttCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCg > 2:1425625/1‑151 (MQ=255) tCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCttt < 1:1007501/148‑1 (MQ=255) tCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCg < 2:1102865/150‑1 (MQ=255) tCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCg < 1:377752/150‑1 (MQ=255) tCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGc > 2:1502324/1‑151 (MQ=255) ccTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGGCGAAGCCCCGCACGGTTACGGGCCAGAAGTTCACGCGGGTTAAACGGTTTTGAAATGTAGTC‑TCCGCGCCAGTCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGcc < 2:1405356/151‑1 (MQ=255) cTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCg > 1:1010714/1‑151 (MQ=255) tgtgACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGt > 1:1239290/1‑151 (MQ=255) gtgACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGt < 1:1081009/150‑1 (MQ=255) ggTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCAt < 1:1541276/151‑1 (MQ=255) gcCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATg > 2:74311/1‑150 (MQ=255) ccTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGAt < 1:431277/151‑1 (MQ=255) ccTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGAt > 2:107021/1‑151 (MQ=255) tGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCg > 1:673877/1‑151 (MQ=255) ggCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCg < 2:397115/150‑1 (MQ=255) gCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGc < 1:1114197/151‑1 (MQ=255) gCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGc < 1:1127254/151‑1 (MQ=255) cAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGc > 1:1169539/1‑150 (MQ=255) aGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCAt > 1:1315559/1‑151 (MQ=255) gttcgttcGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATc < 1:637517/151‑1 (MQ=255) tcgttcgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCgg > 1:582214/1‑151 (MQ=255) tcgttcgCCTGACCACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGTGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCgg > 2:1076628/1‑151 (MQ=255) cgttcgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCggg < 1:389385/151‑1 (MQ=255) gttcgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGt > 2:566480/1‑151 (MQ=255) tcgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTg > 2:1481181/1‑151 (MQ=255) cgCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGc < 1:1486611/151‑1 (MQ=255) acgacgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGa > 2:423885/1‑150 (MQ=255) gacgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACt > 1:366185/1‑150 (MQ=255) gacgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACt > 2:1379087/1‑150 (MQ=255) gacgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTa < 1:238706/151‑1 (MQ=255) cgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACg < 2:32085/151‑1 (MQ=255) cgCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGAAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACg > 1:470006/1‑151 (MQ=255) cagcaCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGa > 1:843268/1‑150 (MQ=255) cagcaCCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGa > 1:111126/1‑150 (MQ=255) cGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTc > 1:1201744/1‑151 (MQ=255) gATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCaaa < 2:1511331/151‑1 (MQ=255) gATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCaa > 1:1280024/1‑150 (MQ=255) aTACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAAt > 1:1277618/1‑151 (MQ=255) aTACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAAt < 2:1160726/151‑1 (MQ=255) aCGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCg > 2:1133957/1‑151 (MQ=255) aCGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCg < 2:308183/151‑1 (MQ=255) gggCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGAc < 1:768115/151‑1 (MQ=255) gggCCACCAGATCATGCGGGCTACACGGATTTGGAATGTAG‑CCTCAGCGCCAATCTCCAGGTCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGCCATCAGGTTCCTCTGACTACGAAGACGTCGGCAACTCGAc > 2:1483292/1‑151 (MQ=255) gCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACaa < 1:324550/151‑1 (MQ=255) gCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACaa < 2:671848/151‑1 (MQ=255) ccAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAg < 2:1139182/151‑1 (MQ=255) ccAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAg < 2:1180453/151‑1 (MQ=255) agcagTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGcc > 2:653266/1‑151 (MQ=255) gcagTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGcc > 1:1538659/1‑150 (MQ=255) cagTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCa < 2:1262599/150‑1 (MQ=255) agTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATc < 1:1493666/151‑1 (MQ=255) agTTCACGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATc > 1:1381985/1‑151 (MQ=255) aCGCGGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCAc < 1:273344/151‑1 (MQ=255) gcgGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCa < 1:603098/151‑1 (MQ=255) cgGGTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAg < 1:886710/151‑1 (MQ=255) ggTTAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGt < 2:181053/151‑1 (MQ=255) ttAAACGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTa > 1:184583/1‑150 (MQ=255) aaaCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAAc > 1:74461/1‑150 (MQ=255) aaCGGTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACAt < 2:1440911/151‑1 (MQ=255) gTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTaaa < 2:1276115/151‑1 (MQ=255) gTTTTGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTaa > 2:51928/1‑150 (MQ=255) ttttGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAAt > 1:54525/1‑151 (MQ=255) tttGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATc > 1:1333865/1‑151 (MQ=255) ttGGAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATcc > 1:80502/1‑151 (MQ=255) ggAATGTAGTC‑TCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCa < 2:447845/150‑1 (MQ=255) | GTACCGAGGTTAAGTTTGAACTTACCGAAAGCAATTACCGCCTCTTCCTGTGACGGTGCGCCTGGCAGTTCGTTCGCCTGACGACGCAGCACCGCACGGATACGGGCCAGCAGTTCACGCGGGTTAAACGGTTTTGGAATGTAGTCGTCAGCGCCAATCTCCAGGCCTACGATACGGTCCACTTCTTCCCCTTTCGCCGTCACCATAATGATCGGCATCGGGTTGCTCTGACTACGAAGACGTCGGCAAATCGACAAGCCATCTTCACCAGGTAACATTAAATCCA > NC_000913/3536139‑3536424 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |