Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,825,061	0	G	A	40.0%	94.6 / 41.9	70	intergenic (‑124/+79)	ves/spy	cold‑ and stress‑inducible protein/periplasmic ATP‑independent protein refolding chaperone, stress‑induced
Reads supporting (aligned to +/- strand):  ref base G (34/8);  new base A (0/28);  total (34/36)
Fisher's exact test for biased strand distribution p-value = 1.13e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAG  >  NC_000913/1824911‑1825207                                                                                                                                                        |                                                                                                                                                   cATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaag                                                                                                                                                    <  1:1123707/151‑1 (MQ=255)  aTTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaaga                                                                                                                                                   <  1:87950/151‑1 (MQ=255)  aTTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaaga                                                                                                                                                   <  1:352129/151‑1 (MQ=255)  aTTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaag                                                                                                                                                    <  2:975443/150‑1 (MQ=255)    tttACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGagaaaagaa                                                                                                                                                  <  2:478667/150‑1 (MQ=255)       aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAc                                                                                                                                               <  2:49103/150‑1 (MQ=255)       aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAc                                                                                                                                               <  1:470115/150‑1 (MQ=255)       aCGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAc                                                                                                                                               <  1:1296549/150‑1 (MQ=255)        cGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAccg                                                                                                                                             >  1:435015/1‑151 (MQ=255)         gCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAc                                                                                                                                               >  2:1221916/1‑148 (MQ=255)          cATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAccgcc                                                                                                                                           >  2:831213/1‑151 (MQ=255)           atatCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAAccgccg                                                                                                                                          >  2:968504/1‑151 (MQ=255)             ataaaaTTATTCCTTACTCGCTCCCGGCCCTTTCTTTTCATTGTTATCTTTCAGGTAACCGTGGATGG‑TTATCGGAAACTCGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTGTTGGAGAAGAAAAAAAAAAAccgccg                                                                                                                                          <  2:738278/146‑1 (MQ=255)             atCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGAt                                                                                                                                        >  1:133695/1‑151 (MQ=255)               cAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATcc                                                                                                                                      >  2:1389991/1‑151 (MQ=255)                aaaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCt                                                                                                                                     >  1:841059/1‑151 (MQ=255)                aaaGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCt                                                                                                                                     >  2:439548/1‑151 (MQ=255)                      ttCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCAc                                                                                                                               >  2:871342/1‑151 (MQ=255)                       tCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCAcc                                                                                                                              >  1:1275770/1‑151 (MQ=255)                         cATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGc                                                                                                                            >  2:89337/1‑151 (MQ=255)                            aCTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt                                                                                                                         >  1:1471773/1‑151 (MQ=255)                            aCTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCAtt                                                                                                                         >  2:1522054/1‑151 (MQ=255)                              tCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTAc                                                                                                                       >  1:11260/1‑151 (MQ=255)                                 cccccGGCCCGTTTTTTTCTTTGTTATGGTTCAGGTACCTGTGGATGG‑TTATCGACAACTGGGGTGTTTTACGTTAGTGGTGATCAGTTTTTTTTTACAACTGTTTGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTa                                                                                                                        <  2:291714/145‑1 (MQ=255)                                 cTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCTGCAACTCGGGGGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTAc                                                                                                                       >  1:1088246/1‑148 (MQ=255)                                   cccGGCCCGTTTTTTTCATTTTTATCGTTCAGGTAACGGTGGATGT‑TTATCGGCAACTGGGGTGATTTACGTTAGTGGTGATCAGGTTTTTTTTACAATTGTTGGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCaa                                                                                                                  <  1:1252375/151‑1 (MQ=255)                                    ccGGCCCGTTTTTTTCTTTGTTATCGTTCAGGTACCGGTGGATGT‑TTATCGGCACCTGGGGTGATTTACTTTAGTGGTGATCGGGTTTTTTTTACAACTGTTTAAGAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAg                                                                                                                 <  1:41287/151‑1 (MQ=255)                                      ggCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGt                                                                                                               >  1:873631/1‑151 (MQ=255)                                        cctgTTTTTTCCATTTTTATCGTTGAGGTACCCG‑GGATGGTTTTTCACCATCTCGGTAAATTTACGTTAGGGGTGATCAGGCTTTTTTCACATCTGTTGAAAAAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAg                                                                                                                 <  2:247677/144‑1 (MQ=255)                                        cccGTTTTTTTCTTTTTTTTGTTTCAGGTACCCGTGGATGT‑TTACCGGAAACTCGGGTAATTTCGGTTAGTGTTGATCGGTTTTTTTTAACAACTTTTGAAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTa                                                                                                              <  2:430515/150‑1 (MQ=255)                                        cccGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGt                                                                                                               >  2:415968/1‑149 (MQ=255)                                         ccGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGt                                                                                                            >  2:643209/1‑151 (MQ=255)                                            tttttttCTTTTTTATCTTTCGGGTACCGGGGGATGT‑TTATCGGCACCTGGGGTGATTTCCGTTGGTGGTGATCGGGTTTTTTTAACAACTTTTTGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTg                                                                                                           <  1:190072/146‑1 (MQ=255)                                                ttttATTTTTTTCTTACAGGAACCGGTGGAGGT‑TTGCCGGCAACGGGGGTATTTTACTTTGGGGGTGATCGGTTTTTTTTTACAACTGTTGGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACaa                                                                                                      <  1:752455/150‑1 (MQ=255)                                                tttCTTTTTTTTCGTGCAGGTAACCGGGGATGT‑TTATCGCAAACTGGGGTGATTTACGTTTGTGGTGACCAGGTTTTTTTTACAACTTTTTGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACaa                                                                                                      <  1:98985/150‑1 (MQ=255)                                                 ttCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACa                                                                                                       >  1:1001614/1‑148 (MQ=255)                                                  tCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGAc                                                                                                   >  2:1517377/1‑151 (MQ=255)                                                     tttttATCTTTGGGGTACCGGGGGAGGG‑TTGTCGGAAACTGGGGTATTTTACGTTGGGGGTGATCGGTTTTTTTTTAAATTTTTTGGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcg                                                                                                 <  1:868559/147‑1 (MQ=255)                                                     ttGTTATCTTTAAGGTAACGGGGGAGGT‑TTTTCGGAAACGGGGTTGTTTTCTTTAAGTGGTGCTCGTGTTTTTTTTACAGCTGTTAGAGAAGAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACcg                                                                                                 <  2:798967/150‑1 (MQ=255)                                                              ttCAGTTACCGGGGGATGG‑TTAGCGGCAACTGGGGTGATTTACTTTAGTGGTGATAAGTTTTTTTTTACAACTTTTGGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGt                                                                                            <  2:513030/146‑1 (MQ=255)                                                              ttCAGTTACCCGGGGATGG‑TTACCGGCAACTGGGGTGATTTACGTTAGTGGTGATCGGGTTTTTTTTACACTTTTTTGAGAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTa                                                                                        <  2:1365877/150‑1 (MQ=255)                                                                  ggTAACCGTGGATGG‑TTTTCGGCAACTGGGGTGTTTTACGTTAGGGGTGATCAGGTTTTTTTTACAACTTTTGGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtt                                                                                    <  1:517969/150‑1 (MQ=255)                                                                     aacctgggATGG‑TTACCGGCAACTGGGTTATTTTACTTTAGTGGGAATCGGGTTTTTTTTCAAACTGTTTAAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtt                                                                                    <  1:92906/141‑1 (MQ=255)                                                                      aCCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGtttttt                                                                                >  2:155958/1‑150 (MQ=255)                                                                         gTGGATGT‑TTATCGGCAACTGGGGTGTTTTACTTTAGTGGTGATCGGGTTTTTTTTACAATTTTTGGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCt                                                                            <  1:1138997/151‑1 (MQ=255)                                                                          tGGATGT‑TTCTCGGAATTTCGGATTTTTTACGTTAGTGGTGATTGGTTTTTTTTTACAGCTGTTTGAAAAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGttttt                                                                                 <  2:1297534/145‑1 (MQ=255)                                                                            gATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGa                                                                          >  1:954397/1‑150 (MQ=255)                                                                                gtttATCGAAACCTGGGGTGATTTCCGTTGGTGGTGATCGGGTTTTTTTTACACTTGTTTGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTg                                                                           <  1:47261/144‑1 (MQ=255)                                                                                 tttATCGGAAACGGGGTTAATTTCCGTTGGTGGTGACCAGGTTTTTTTAACAATTGTTGGAAAGGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGaa                                                                         <  2:1084783/146‑1 (MQ=255)                                                                                  ttATGGGCAACTGGGGTATTTTACGTGGGTGGTGATCGGTTTTTTTTTACATGTGTTGGAGAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGat                                                                     <  2:1565542/150‑1 (MQ=255)                                                                                  ttATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatt                                                                    >  1:708694/1‑151 (MQ=255)                                                                                   tATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGatt                                                                    >  2:1373716/1‑150 (MQ=255)                                                                                       ggCAACTGGGGTTTTTTCAGTTAGGGGTATTCGGGTTTTTTTAACAATTGTTAAAAAAAAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAg                                                                       <  1:645752/143‑1 (MQ=255)                                                                                       ggCAACTCGGGTGATTTACGTTAGTGGCGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAAGTTTTTGGCTGAAAGatt                                                                    >  1:1383204/1‑146 (MQ=255)                                                                                        gatatgtgggTGATTTCTGTTGGGGGTCATCGGATTTTTTTTACATTTTTTGTAAAAAAGAAAAAAAGACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGatta                                                                   <  2:621699/139‑1 (MQ=255)                                                                                           aCTGGGGTATTTTACGTTGGGGGTGATCAGGTTTTTTTTACACTTGTTTGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTcagcag                                                           <  2:870104/151‑1 (MQ=255)                                                                                               gggTGTTTTACGTTAGTGGTGATCAGGTTTTTTTTACAACTGTTTGAAAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg                                                        <  1:1021006/150‑1 (MQ=255)                                                                                                ggTGATTGCCGTTAGTGTTAATCAGGTTTTTTTTACCATTGTTGAAAAAAAAAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTg                                                        <  2:931822/149‑1 (MQ=255)                                                                                                     tttACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGGCTTAAGTTTTTTTGCTGAAAGATTATTCAGCCGTTGCAGGCAt                                                 >  2:1080036/1‑151 (MQ=255)                                                                                                      ttccGTTAGTGGTGCTCGGGTTTTTTTTACATTTTTTGGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAt                                                 <  2:715793/147‑1 (MQ=255)                                                                                                      ttACGTTAGTGTTAATCAGGTTTTTTTAACAACTGTTAGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCAt                                                 <  1:147067/150‑1 (MQ=255)                                                                                                          gTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTAc                                            >  1:1103957/1‑151 (MQ=255)                                                                                                              gtggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTTAGTTTTTTGGCTGAAAGATTATTCAGCAGGTGCAGGCATTTTACCttt                                        >  2:1217684/1‑151 (MQ=255)                                                                                                               tggtgATCAGGTTTTTTTTACAATTGTTGGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCt                                          <  2:537471/148‑1 (MQ=255)                                                                                                               tggtgATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGCCTTTAGTTTTTTGGCTGGAAGATTATTTAGGAGTTGCAGGGATTTTTCCtttt                                       >  1:1170291/1‑151 (MQ=255)                                                                                                                      cAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTg                                >  2:190900/1‑151 (MQ=255)                                                                                                                           tttttttACATCTGTTTGAGAAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACg                            <  1:1286157/150‑1 (MQ=255)                                                                                                                           tttttttACACCTTTTTGAGAAGAAAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGAc                             <  1:467303/149‑1 (MQ=255)                                                                                                                                ttACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGGTTTTTGGCTGAAAGATTATTCAGCAGTTTCAGGCATTTTACCTTTTTCCGCTGGACGGTCTGt                      >  1:547214/1‑151 (MQ=255)                                                                                                                                      ttttttAAGAAGAGAAAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGGCAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAg                   <  2:913424/145‑1 (MQ=255)                                                                                                                                      cTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACg                >  1:1242390/1‑151 (MQ=255)                                                                                                                                       ttttggagaagaaaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGa                  <  2:1275752/143‑1 (MQ=255)                                                                                                                                       tGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGCAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGGCGTTCTGTCAGAc                 >  2:1104486/1‑149 (MQ=255)                                                                                                                                             agaagagaaAAAAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGcgga            <  1:1171454/148‑4 (MQ=255)                                                                                                                                                agagaaAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTTGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTTCCGCTGGACGTTCTGTCAGACGCTTCTCaaa       >  2:245206/1‑150 (MQ=255)                                                                                                                                                   aaaaaaaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTa   <  1:1380233/150‑1 (MQ=255)                                                                                                                                                    aaaaaaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAg  <  1:160612/151‑1 (MQ=255)                                                                                                                                                    aaaaaaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAg  <  2:874937/151‑1 (MQ=255)                                                                                                                                                     aaagaaaaCCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGAATATTCAGCAGTTGGAGGCATTTTACCTTTTGCCGCTGGACGATCTGTCAGACGCTTCTCacca      >  2:1338584/1‑143 (MQ=255)                                                                                                                                                        |                                                                                                                                                   CATTTTACGCATATCAAAGTATTCCATACTCGCTCCCGGCCCGTTCTTTTCATTGTTATCGTTCAGGTAACCGTGGATGG‑TTATCGGCAACTCGGGTGATTTACGTTAGTGGTGATCAGGCTTTTTTTACAACTGTTTGAGAAGAGAAAAGAAAACCGCCGATCCTGTCCACCGCATTACTGCAAGGTAGTGGACAAGACCGGCGGTCTTAAGTTTTTTGGCTGAAAGATTATTCAGCAGTTGCAGGCATTTTACCTTTTGCCGCTGGACGTTCTGTCAGACGCTTCTCAAAATTAG  >  NC_000913/1824911‑1825207

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑