| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,556,200 | 0 | G | A | 45.6% | 95.1 / 52.4 | 93 | S217F (TCC→TTC) | rtcA | RNA 3'‑terminal phosphate cyclase |
| Reads supporting (aligned to +/- strand): ref base G (40/10); new base A (0/42); total (40/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.51e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCC > NC_000913/3556051‑3556343 | ccAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGa < 1:521908/151‑1 (MQ=255) tgtgCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAAc > 1:316055/1‑151 (MQ=255) gtgCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACt < 2:110324/151‑1 (MQ=255) gtgCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACt < 1:217201/151‑1 (MQ=255) gtgCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACt > 1:1312740/1‑151 (MQ=255) gCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTcc > 2:1262653/1‑151 (MQ=255) gCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTc < 1:711049/150‑1 (MQ=255) ccGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTccc < 1:220912/151‑1 (MQ=255) cAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGc > 1:1082582/1‑151 (MQ=255) acccccTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGcc < 2:314239/150‑1 (MQ=255) accTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGCGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAg > 2:1226314/1‑149 (MQ=255) tCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAgtgt > 2:246688/1‑149 (MQ=255) cttttttCCCCGCCAAAAAAAAAGCGTTG‑GGTGATATTTTCTCTTTCAACTCAAAGCGAGGCGGTATCCCCC‑GGCCC‑CTGG‑CGGCGCGGAGGG‑TTAAGAATTTT‑TTGTT‑CATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACg < 1:1236951/146‑1 (MQ=255) cgcTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCATGc > 1:1300234/1‑150 (MQ=255) gcTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTc > 2:194475/1‑151 (MQ=255) tttcccccGACAAAAAAAAGGGTTTC‑GTTAATTTTTTCCTTTTCGACTTAAGGCGAGACGTTATTCCCC‑GGCCC‑CTGT‑TCGCGCGGCAGT‑TTATGAATTTT‑CTGTT‑CATGCGGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTc < 1:736380/143‑1 (MQ=255) ttttccccaagaaaaaaaaGTGTTCGGGTGATATTTCCCCTTTCGCCTTCAACCGAGCCGTTATTCCCG‑GCCCC‑CTGG‑CCGCGCGGCAGG‑TTAAAAAAATT‑TTTTT‑CAGGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCa < 1:146980/137‑1 (MQ=255) tttCCCCGACGAAAAAAAAGCGTTG‑GGTAATTTTTTCCTTTTCTACTCAAAGCGAGAGGGTTTTCCCC‑GGCCC‑CTGG‑TCGCGGGGCAGT‑TTATGAATATT‑TTTTT‑CATGAAGGGAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAg < 1:59341/150‑1 (MQ=255) tttCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGc > 2:868161/1‑151 (MQ=255) cACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAAc > 2:854480/1‑151 (MQ=255) ccGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACAt > 1:191761/1‑151 (MQ=255) ccGACAAAAAAAAGGCGTGC‑GGTGATTTTTCCACTTCCGACTTCAAGCGAGCCGTTATTCCCC‑GCCCC‑TTGG‑TCGCGGGGCAGT‑TTATAAATATT‑CTGTT‑CATGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACa < 1:869360/150‑1 (MQ=255) cgacaaAAAAAAAGGGTTG‑GTTGATTTTTTCGCTTCCGCCTAAAACAGAGAGGTTATTCCCC‑GCCCG‑CGGG‑GCGCGCGGAAGT‑TAATAAATATT‑TTGTT‑CAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATg < 2:434108/151‑1 (MQ=255) gacAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGgcgc > 1:648531/1‑151 (MQ=255) acAAAAAGGCGTTG‑GGTAATTTTTCCCCTTCCGCCTTCAAGCGAGCCGGTATCCCCC‑GCCCC‑CGGG‑TCGCGGGGCAGT‑TTATGAATTTT‑CTGTT‑CAGGAAGAGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATgg < 2:151643/147‑1 (MQ=255) cAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCgg > 1:17437/1‑151 (MQ=255) aaaaaaGTGTCG‑GGTAATATTTTCCCTTCCGACTCAAAGGGAGCGGGTATTCCCC‑GGCCC‑CGGG‑TCGCCCGGCAGG‑TTATGAATTTT‑CTGTT‑CAGGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc < 1:255222/151‑1 (MQ=255) aaaaaaGCTTTC‑GGTATTTTTTTCACTTGCGGCTGAAGAGGGGACGGTATTCCCC‑GCCCC‑CGGG‑CCGCG‑GGCGGGTTTTTGATTTTT‑CTGTT‑CACGGGGAAAAAAACACCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGcgcg < 1:539026/149‑1 (MQ=255) aaaaaaGCGTTC‑GTTGTTTTTTCCCCTTTCGACTAAAAGGGAGACGGTATT‑CCC‑CGCCC‑CTGGTTCCCGCGGCAGG‑TTAGAAATATT‑CGGTT‑CAGGCAGGAAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc < 2:1147321/151‑1 (MQ=255) aaaaaaGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc > 2:140756/1‑151 (MQ=255) aaaaaaGCGTTC‑GGGAATATTTTCACTTTCGCCTCCAAGCGAGACGGTATTCCCC‑GCCCC‑CGGG‑TCGCGCGGCAGT‑TTATAAATATT‑CTGTT‑CAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc < 1:1064369/151‑1 (MQ=255) aaaaaaGCGTCG‑GGTGATTTTTTCCCTTCCGTCTACAAGGGGGACGGTATTCCCC‑GCCCC‑CTGC‑CCGCGGGGCAGT‑TTATGAATTTT‑CTGTC‑CAGGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGc < 1:426650/151‑1 (MQ=255) aaaaaGCTTTC‑GGTGATATTTTCTTTTCCGACTTCAAGCGAGCCGGTATCCCCC‑GCCCC‑CGGG‑TCGCGCGGCAGT‑TTATAAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGca < 1:271383/151‑1 (MQ=255) aaaaGCGTTG‑GGTGATTTTTCCCCTTTCGCCTTAAAGCGAGACGGTATTCCCC‑GCCCC‑GTGG‑TCGCGCGGAAGT‑TTATAAATTTT‑CTGTT‑AATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGcac < 1:1494724/151‑1 (MQ=255) aaaGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGcac > 1:684368/1‑150 (MQ=255) aaGCGTTC‑GGTGATTTTTTCCCTTTCGACTTAAAGCGAGACGGTTTTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGT‑TTATAAATATT‑CTGTT‑AATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCacac < 1:480563/151‑1 (MQ=255) ttC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCAAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAg > 2:84309/1‑149 (MQ=255) ggTGATTTTTTCATTTTCGACTTCAAGCGAGACGTTATTCCCC‑GGCCC‑CGGG‑TCGCGCGGCAGT‑TTATAAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCt < 1:1501601/148‑1 (MQ=255) gTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAAt > 1:1278163/1‑150 (MQ=255) gATTTTTTCCCTTTCGCCTTCAAGCGAGACGGTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATa < 1:1159522/149‑1 (MQ=255) atatTTTCTCTTTCGACTTCAAGCGAGACGGTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCGGT‑TTATGAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGa < 1:1183612/150‑1 (MQ=255) ttttttCTCTTCCGCCTACAAGCGAGACGTTATTCCCC‑GCCCC‑CTGG‑TCGCGCGGCAGT‑TTATGAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGa < 1:70533/147‑1 (MQ=255) ttttttCCCTTTCGACTTAAAGGGAGACGTTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTTTT‑CATGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAg < 1:889041/146‑1 (MQ=255) ttttttCACTTCCGACTTCAAGCGAGACGGTTTTCCCC‑GGCCC‑CTGG‑CCGCGGGGCAGT‑TTAGGAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTa < 2:698479/142‑1 (MQ=255) tatTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAAc > 2:1380111/1‑151 (MQ=255) ttttCCTTTTCGCTTTCAAGCGGGACGTTTTCCCCC‑GGCCC‑CTGG‑CCGCGCGGCGGT‑TTATAAATTTT‑CTGTT‑CATGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAg < 2:1005951/146‑1 (MQ=255) ttttCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACtt > 1:214451/1‑151 (MQ=255) tttCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTtc > 2:964792/1‑151 (MQ=255) cACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTcc > 1:1157525/1‑151 (MQ=255) aCTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTcc > 1:463437/1‑150 (MQ=255) cTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCAc > 1:867618/1‑151 (MQ=255) tttCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACg > 2:558435/1‑151 (MQ=255) ttCGCCTTCAAGCGAGGCGGTATTCCCC‑GCCCC‑CGGG‑TCGCGGGGCAGG‑TTATGAATTTT‑CTTTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACg < 1:457597/150‑1 (MQ=255) ttCGACTTCAAGCGAGACGGTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGT‑TTATGAATTTT‑CTGTT‑AATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACg < 1:1471712/150‑1 (MQ=255) cGACTCCAAGCGAGACGGTTTTCCCC‑GCCCC‑CTGG‑CCGCGCGGCAGT‑TTATAAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCa < 1:295877/150‑1 (MQ=255) aCTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt > 2:844646/1‑151 (MQ=255) aCTTAAAGCGAGGCGGTATTCCCC‑GGCCC‑CTGG‑CCGCGCGGCGGT‑TTATGAATTTT‑CTGTT‑CAGGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCAc < 1:374326/145‑1 (MQ=255) cTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTg > 1:598991/1‑151 (MQ=255) ttaaaGCGAGCCGGTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGT‑TTATAAATTTT‑CTGTT‑CATGCAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt < 1:194664/146‑1 (MQ=255) tcaaaGCGAG‑CGGTTTTTCCCGGGCCC‑CTGG‑TCGCGCGGCGGT‑TTATAAATTTT‑CTTTC‑CAGGCGGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCa < 1:798265/143‑1 (MQ=255) taaaggCGAGACGGTATTCCCG‑GGCCC‑CTGG‑CCGCGGGCAAGT‑TTATAAATTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCt < 2:1356657/144‑1 (MQ=255) cAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac > 2:1424216/1‑151 (MQ=255) aggCGAGACTGTATTCCCC‑GCCCC‑CTGG‑TCGCGGGGCAGT‑TTATAAATTTT‑CTGTT‑CATGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac < 1:618276/148‑1 (MQ=255) aaGCGAGACGTTATTCCCC‑GGCCC‑CTGG‑TCGCGCGGCAGT‑TTATGAATATT‑CTTTT‑CATGCAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcaca < 1:1000512/151‑1 (MQ=255) aaGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGcac > 2:1258614/1‑150 (MQ=255) gagaCGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGt > 1:225779/1‑151 (MQ=255) agaCGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGtt > 1:943573/1‑151 (MQ=255) gccgatttcccc‑GGCCCTCTGC‑GCGCGCGGCGGT‑TGTTAAATTTT‑GTGTT‑CATGCGGCAAAACCCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATg < 2:531806/139‑1 (MQ=255) ggTATCCCCC‑GGCCC‑CGGG‑TCGCGCGGCAGT‑TTATAAATATT‑CTGTT‑CAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg < 2:744205/151‑1 (MQ=255) tttgcccgggCCC‑TTGG‑CCGCGCGTCGTG‑TTA‑GAATTTTCCTGTT‑CATGCAGGCAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTccc < 2:48184/140‑1 (MQ=255) tccccc‑GGCCC‑CGGG‑TCGCGCGGGAGT‑TTATAAATTTT‑CTTTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg < 2:1494489/144‑1 (MQ=255) cccc‑GCCCC‑CGGG‑CCGCGGGGAGGT‑TTATAAATTTT‑CTTTT‑CAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCcg < 2:1089043/144‑1 (MQ=255) ccc‑GGCCC‑CTGG‑CCGCGCGGCAGG‑TTATAAATATT‑‑TGTTCCATGCAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTc < 2:889506/149‑1 (MQ=255) ccc‑GGCCC‑CGGG‑TCGCGCGGAAGT‑TTATAAATATT‑TTGTT‑CAGGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTc < 2:273097/149‑1 (MQ=255) ccc‑GCCCC‑CTGG‑TCGCGCGGCAGG‑TTATAAATATT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTc < 1:1415862/149‑1 (MQ=255) cc‑cTGG‑CCGCGCGGCAGT‑TTATAAATATT‑CTGTT‑CATGCAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGtt < 1:1262671/151‑1 (MQ=255) gcgcgGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGgtg > 2:1224937/1‑151 (MQ=255) ggcggtttATAAATATT‑CTGTT‑CATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTaa < 2:1503162/145‑1 (MQ=255) gCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTaa > 1:311862/1‑150 (MQ=255) gCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTaa > 2:1482981/1‑150 (MQ=255) gg‑TTATGAATATT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAAc < 1:868177/149‑1 (MQ=255) ttATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATg > 2:340545/1‑151 (MQ=255) ttATGAATATT‑CTGTT‑CATGCAGGAAAAAACCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGa < 1:209819/149‑1 (MQ=255) tATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGc > 2:574375/1‑151 (MQ=255) tATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGc > 2:595155/1‑151 (MQ=255) tATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGc > 1:515550/1‑151 (MQ=255) aTGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGcc > 1:609764/1‑151 (MQ=255) aaTTTT‑CTGTT‑CATGCAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCa < 2:463431/149‑1 (MQ=255) aaTATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACg > 1:647125/1‑151 (MQ=255) atT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGc > 2:1061257/1‑151 (MQ=255) t‑CTGTT‑CATGCAGGAAAAACCTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCg < 1:1136124/150‑1 (MQ=255) tGTT‑CAGGAAGGAAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCgag < 2:1275822/150‑1 (MQ=255) gCAGGGAAAACCCCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTcc < 1:194084/149‑1 (MQ=255) | CCAACTGTGCCGCAACCACCTCGGCACTGACGCGCTTTTCACCGACGACAAAAAAGCGTTC‑GGTGATATTTTCACTTTCGACTTCAAGCGAGACGGTATTACCC‑GGCCC‑CTGG‑TCGCGCGGCAGG‑TTATGAATATT‑CTGTT‑CATGCAGGGAAAAACTCCCCGCCAGTGTAGCGATTTCACGCTCAGCAACATGGCGCGGCACACCAGCTAATAGAACTTCTCCACGCATCTGCACAATGTTCCCGCGCTCGCCAAGTTGCAAGGTGTTAAACGATGCCACGGGCGAGACTTCC > NC_000913/3556051‑3556343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |